EY659619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18 Identity = 78/230 (33.91%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + AS+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 36 RKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18 Identity = 76/213 (35.68%), Postives = 104/213 (48.83%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMG E R LG D YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP----------------LGEGLDKIYPGGA-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18 Identity = 75/213 (35.21%), Postives = 104/213 (48.83%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G + PE+L + G+ E WF+ G I G Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 50 GPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHGRWAMLGALGCVFPELLARNGVKFGEA--VWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGGS-FDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18 Identity = 76/225 (33.78%), Postives = 110/225 (48.89%), Query Frame = 2 Query: 155 VVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 V ++A + G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+D + + K++ +KNGRLA + + + ++ GP Sbjct: 39 VAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18 Identity = 78/230 (33.91%), Postives = 112/230 (48.70%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + S+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R + LG DP YPGG F+PLGLA+D + + K++ +KNGRLA + + + L+ GP Sbjct: 35 RKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----------------EPLGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGP 239
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17 Identity = 77/222 (34.68%), Postives = 105/222 (47.30%), Query Frame = 2 Query: 164 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPY--------TLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 AAS G DR ++ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y P ++ ++ LMG E R LG DP YPGG F+PLGLA D D K++ +KNGRLA + + + ++ GP Sbjct: 55 AASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP----------------LGEVTDPIYPGGN-FDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17 Identity = 77/230 (33.48%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + S+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+D + + K++ +KNGRLA + + + ++ GP Sbjct: 36 RKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17 Identity = 77/222 (34.68%), Postives = 105/222 (47.30%), Query Frame = 2 Query: 164 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 AAS G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y P ++ ++ LMG E R LG DP YPGG F+PLGLA D + K++ +KNGRLA + + + ++ GP Sbjct: 55 AASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP----------------LGEVTDPIYPGGN-FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 251
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17 Identity = 77/230 (33.48%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + S+ G DR + S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+D + + K++ +KNGRLA + + + ++ GP Sbjct: 35 RKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.445e-17 Identity = 80/243 (32.92%), Postives = 114/243 (46.91%), Query Frame = 2 Query: 101 LGARSAQFPTGSSRKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 LG + + S RK V + S+ G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 21 LGPSAPEVGRVSMRKT--VTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 236 The following BLAST results are available for this feature:
BLAST of EY659619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659619 ID=EY659619; Name=EY659619; organism=Citrus sinensis; type=EST; length=910bpback to top |