EY659619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.171e-17 Identity = 79/243 (32.51%), Postives = 111/243 (45.68%), Query Frame = 2 Query: 125 PTGSSRKGSFVVRAASTPPVKQGADRPLWFASK----------QSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 P S GS V T +G W+ S +S SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R A G +G + D YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 22 PAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRV---AGNGPLGE------------AEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.293e-17 Identity = 73/213 (34.27%), Postives = 104/213 (48.83%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGP----------------LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.293e-17 Identity = 73/213 (34.27%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DRP + S+ + SYL G PGDYG+D +S DPE F + + L EVI+ R+AMLGA+G + PE+L K GL E WF+ G I G +Y +P ++ ++ LMG E R G++G DP PGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 52 GPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGLKFGEA--VWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGEGL------------DPLLPGG-AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.585e-16 Identity = 75/230 (32.61%), Postives = 109/230 (47.39%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + AS+ G DR + S ++ SYL G P DYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+D + + K++ +KNGRLA + + + ++ GP Sbjct: 36 RKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGIKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVIDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.585e-16 Identity = 73/213 (34.27%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G+DR + S + SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E Y + E LG + D YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 51 GSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FARNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEG---------------YRVAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16 Identity = 75/222 (33.78%), Postives = 106/222 (47.75%), Query Frame = 2 Query: 164 AASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 AA++ G DR L+ S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +K GRLA + + ++ GP Sbjct: 42 AAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGP 238
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16 Identity = 68/197 (34.52%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 233 SYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 SYL G PGDYG+D GLS DPE F + + L EVI+ +AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 8 SYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSTWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP----------------LGEVTDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 179
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16 Identity = 70/202 (34.65%), Postives = 99/202 (49.01%), Query Frame = 2 Query: 218 SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 S +S SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+ + + K++ +KNGRLA + + ++ GP Sbjct: 25 SGESPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEA--VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVVDPLYPGGS-FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGP 201
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16 Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 2 Query: 212 FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGPTR 799 F+ + YL G PGDYG+D GLS DP+ + E E+I+ R+A+LGA+G + PE+L + AG+ Q WF+ G I G NY + + +++ LMG AE R AN GS G FL D YPGGP F+PLGLA D + K++ +KNGRLA + + ++ GP + Sbjct: 45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGILTPELLSQYAGV--QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR----ANGGSEG---FLD-------DLDTLYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQ 228
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.531e-16 Identity = 72/213 (33.80%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 52 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVIDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239 The following BLAST results are available for this feature:
BLAST of EY659619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659619 ID=EY659619; Name=EY659619; organism=Citrus sinensis; type=EST; length=910bpback to top |