EY659619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.023e-16 Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 2 Query: 191 GADRPLW---FASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGPTR 799 G +R W ++ + +YL G PGDYG+D GLS DPE + E E+I+ R+AMLGA+G PE+L K+G E WF+ G I G +Y +P + +++ LMG E R N G G DP YPG F+PLGLA D + K++ +KNGRLA + + + ++ GP + Sbjct: 38 GPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARWAMLGALGCQTPELLAKSGTKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYR----VNGGPAGEGL------------DPLYPGES-FDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQ 228
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.867e-16 Identity = 72/213 (33.80%), Postives = 103/213 (48.36%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR + S ++ SYL G PGDYG+D LS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + K++ +KNGRLA + + + ++ GP Sbjct: 53 GPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVVDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.027e-15 Identity = 74/230 (32.17%), Postives = 108/230 (46.96%), Query Frame = 2 Query: 140 RKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 RK + + S+ G DR + S ++ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+ + G+ E W + G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA+D + + K++ KNGRLA + + + ++ GP Sbjct: 36 RKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGVKFGEAV--WLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGP----------------LGVVVDPLYPGGS-FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGP 240
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.342e-15 Identity = 72/214 (33.64%), Postives = 99/214 (46.26%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR W S + +YL G PGDYG+D GLS DPE + E EVI+ R+A+LGA+G + PE+L AG+ E WF+ G I G +Y P + +++ LMG E R N G G DP YPG F+PLGLA D + K++ +KNGRLA + + + ++ GP Sbjct: 41 GPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYREL------EVIHARWALLGALGILTPELLSTYAGVKFGEPV--WFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR----VNGGPAGEGL------------DPLYPGES-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGP 229
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15 Identity = 71/213 (33.33%), Postives = 102/213 (47.89%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 G DR + S + SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E +WF+ G I G +Y + ++ ++ LMG E R LG DP YPGG F+PL LA D + + K++ +KNGRLA + + + ++ GP Sbjct: 31 GPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEA--SWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGP----------------LGEVTDPIYPGGS-FDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 218
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.289e-15 Identity = 76/248 (30.65%), Postives = 114/248 (45.97%), Query Frame = 2 Query: 110 RSAQFPTGS--SRKGSFVVRAASTP--PVKQGA-----DRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 ++ P+ S +R G +R T PV G+ DR + S ++ SYL G PGDYG+D GLS T F + + L EVI+ R+ MLGA+G + PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPGG F+PLGLA D + + +++ +KNGRLA + + + ++ GP Sbjct: 16 KAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP----------------LGEVIDPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGP 239
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 72/232 (31.03%), Postives = 102/232 (43.97%), Query Frame = 2 Query: 134 SSRKGSFVV-RAASTPPVKQGADRPL-WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 S++KG+ V +++S+ G D W Q G PGDYG+D GLS DPE + E E+I+ R +LGA+G + PE+L I A WF+ G I G NY +P + +++ LMG E R N G G DP YPG F+PLGLA D + K++ +KNGRLA + + ++ GP Sbjct: 39 STKKGAKAVSKSSSSANQFYGPDATSGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR----VNGGPAGEGL------------DPLYPG-EAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGP 247
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13 Identity = 66/177 (37.29%), Postives = 87/177 (49.15%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKD 685 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L K G+ E WF+ G I G +Y +P ++ ++ LMG E R LG D YPGG F+PLGLA+D Sbjct: 50 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRWAMLGALGCVFPELLAKNGVKFGEA--VWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGP----------------LGEGLDQLYPGG-AFDPLGLAED 201
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12 Identity = 69/213 (32.39%), Postives = 100/213 (46.95%), Query Frame = 2 Query: 191 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLACWPSWVTLFKVLLQELGP 793 GADR L+ S SYL G PGDYG+D GLS DPE F + + L EVI+ R+A+ +G + PE+L + G+ E WF+ G I G ++ +P ++ ++ LMG E GR LG DP Y GG F+PLGL D + + K++ +KNGRLA + + + ++ GP Sbjct: 50 GADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPET---FAKNREL---EVIHCRWAIAVGLGCVFPELLARNGVKFGEGV--WFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAG-------GR---------LGEVVDPLYLGGS-FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 237
BLAST of EY659619 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12 Identity = 62/178 (34.83%), Postives = 82/178 (46.07%), Query Frame = 2 Query: 233 SYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYPGGPLFNPLGLAKDEKFMEDFKLQAMKNGRLA 739 SYL G PGDYG+D GLS T F + + L EVI+ R AM A+G I PE+L G E WF+ G I G +Y +P ++ ++ LMG E R LG DP YPG F+ LGLA+D + + K++ +KNGRLA Sbjct: 71 SYLTGEFPGDYGWDTAGLSAYPET--FAKNREL---EVIHSRCAMSAALGCIFPELLSVMGQGFGEA--VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIA----------------RGPLGEVTDPLYPGS--FDSLGLAEDTEAFAELKVKELKNGRLA 223 The following BLAST results are available for this feature:
BLAST of EY659619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659619 ID=EY659619; Name=EY659619; organism=Citrus sinensis; type=EST; length=910bpback to top |