EY659615

Overview
NameEY659615
Unique NameEY659615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length975
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.750e-15
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  131 YTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTL 382
            Y  + GGAN+LA GY  G G+  +++GT+V  YTVFS TDP   +   HVPVLAP    ++ V   H  TIPITGTGINP+ +L
Sbjct:  141 YARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLA-VLVVHLATIPITGTGINPARSL 223          

HSP 2 Score: 22.7126 bits (47), Expect = 1.750e-15
Identity = 6/7 (85.71%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  429 WLFWVGP 449
            W+FWVGP
Sbjct:  241 WIFWVGP 247          

HSP 3 Score: 20.4014 bits (41), Expect = 1.750e-15
Identity = 6/18 (33.33%), Postives = 10/18 (55.56%), Query Frame = 3
Query:   63 YIFGSCLGAISGGGWVKS 116
            Y    C+GA+ G G  ++
Sbjct:  117 YTMAQCVGAVCGAGLARA 134          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.774e-15
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  110 QVFSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPS 373
            + F K  Y  + GGAN +A+GY  G     +++GT+V  YTVFS TDP  ++   HVP+LAP     + V   H  TIPITGTGINP+
Sbjct:  139 KAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFA-VFMVHLATIPITGTGINPA 225          

HSP 2 Score: 24.6386 bits (52), Expect = 1.774e-15
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  460 AAIAGFYHQFILKAGSDNALG 522
            A  A  YHQ++L+A +  ALG
Sbjct:  254 ALAAAAYHQYVLRAAAIKALG 274          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.774e-15
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  110 QVFSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPS 373
            + F K+ Y    GGAN +A GY  G  L  +I+GT+V  YTVFS TDP  ++   H+PVLAP     + V   H  TIPITGTGINP+
Sbjct:  137 KAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFA-VFMVHLATIPITGTGINPA 223          

HSP 2 Score: 25.0238 bits (53), Expect = 1.774e-15
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  460 AAIAGFYHQFILKAGSDNALG 522
            A  A  YHQ+IL+A +  ALG
Sbjct:  252 ALAAAAYHQYILRASAIKALG 272          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.523e-15
Identity = 56/138 (40.58%), Postives = 72/138 (52.17%), Query Frame = 2
Query:   14 NPSFGAGINRPRP---TRPVHFWVMPWSNLRRWVGQV--FSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTLRSRCYVQQGH 412
            NP+   G+   R    TR + + VM         G V  F K  Y    GGAN +A GY  G GL  +I+GT++  YTVFS TD   N+   HVP+LAP     + V   H  TIPITGTGINP+ +L +     +GH
Sbjct:  116 NPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFA-VFLVHLATIPITGTGINPARSLGAAIIYNRGH 252          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.341e-15
Identity = 56/128 (43.75%), Postives = 69/128 (53.91%), Query Frame = 2
Query:   14 NPSFGAGINRPRP---TRPVHFWVMPWSNLRRWVGQV--FSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTL 382
            NP+   G+   R    TR V++ VM         G V  F    Y A  GGAN +A GY  G GL  +I+GT+V  YTVFS TD   N+   HVP+LAP     + V   H  TIPITGTGINP+ +L
Sbjct:  114 NPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFA-VFLVHLATIPITGTGINPARSL 240          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.587e-15
Identity = 56/138 (40.58%), Postives = 72/138 (52.17%), Query Frame = 2
Query:   14 NPSFGAGINRPRP---TRPVHFWVMPWSNLRRWVGQV--FSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTLRSRCYVQQGH 412
            NP+   G+   R    TR +++ VM         G V  F    Y A  GGAN +A GY  G GL  +I+GT+V  YTVFS TD   N+   HVP+LAP     + V   H  TIPITGTGINP+ +L +     + H
Sbjct:  114 NPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFA-VFLVHLATIPITGTGINPARSLGAAIIYNKDH 250          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.587e-15
Identity = 56/138 (40.58%), Postives = 72/138 (52.17%), Query Frame = 2
Query:   14 NPSFGAGINRPRP---TRPVHFWVMPWSNLRRWVGQV--FSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTLRSRCYVQQGH 412
            NP+   G+   R    TR +++ VM         G V  F    Y A  GGAN +A GY  G GL  +I+GT+V  YTVFS TD   N+   HVP+LAP     + V   H  TIPITGTGINP+ +L +     + H
Sbjct:  114 NPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFA-VFLVHLATIPITGTGINPARSLGAAIIYNKDH 250          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.111e-14
Identity = 44/88 (50.00%), Postives = 54/88 (61.36%), Query Frame = 2
Query:  110 QVFSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPS 373
            + F  + Y    GGAN +A GY TG  L  +I+GT+V  YTVFS TDP  ++   HVPVLAP     + V   H  TIPITGTGINP+
Sbjct:  135 KAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFA-VFMVHLATIPITGTGINPA 221          

HSP 2 Score: 22.7126 bits (47), Expect = 1.111e-14
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query:  460 AAIAGFYHQFILKAGSDNAL 519
            A  A  YHQ+IL+A +  AL
Sbjct:  250 ALAAAAYHQYILRAAAIKAL 269          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.758e-14
Identity = 54/138 (39.13%), Postives = 71/138 (51.45%), Query Frame = 2
Query:   14 NPSFGAGINRPRP---TRPVHFWVMPWSNLRRWVGQV--FSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTLRSRCYVQQGH 412
            NP+   G+   R    TR + + VM         G V  F +  Y    GGAN +A GY  G GL  +I+GT++  YTVFS TD   N+   HVP+LAP     + V   H  TIPITGTGINP+ +L +     + H
Sbjct:  117 NPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFA-VFLVHLATIPITGTGINPARSLGAAIIYNKDH 253          
BLAST of EY659615 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 2
Query:   14 NPSFGAGINRPRP---TRPVHFWVMPWSNLRRWVGQV--FSKSYYTAYRGGANQLAVGYKTGVGLAGKIMGTYVWGYTVFSGTDPNINSIHYHVPVLAPNAHWISCVHR*H*VTIPITGTGINPSGTLRSRCYVQQGH 412
            NP+   G+   R    TR + + +M         G V  F +  Y    GGAN +A GY  G GL  +I+GT++  YTVFS TD   N+   HVP+LAP     + V   H  TIPITGTGINP+ +L +     + H
Sbjct:  120 NPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFA-VFLVHLATIPITGTGINPARSLGAAIIYNRDH 256          
The following BLAST results are available for this feature:
BLAST of EY659615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
PIP28_ORYSJ1.750e-1551.19Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA1.774e-1546.59Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP27_ARATH1.774e-1548.86Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP12_ORYSJ2.523e-1540.58Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_ARATH7.341e-1543.75Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA9.587e-1540.58Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH9.587e-1540.58Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP28_ARATH1.111e-1450.00Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ4.758e-1439.13Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP13_MAIZE6.214e-1438.41Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659615 ID=EY659615; Name=EY659615; organism=Citrus sinensis; type=EST; length=975bp
CTTACTGGTNACAAATCCCAGTTTCGGTGCCGGNATTAACCGGCCTCGAC
CCACGCGTCCGGTACATTTTTGGGTCATGCCTTGGAGCAATCTCCGGCGG
TGGGTGGGTCAAGTCTTTTCAAAATCTTACTACACAGCGTACCGAGGAGG
GGCCAACCAGCTGGCCGTTGGGTACAAAACAGGCGTGGGATTGGCCGGCA
AGATCATGGGGACCTATGTGTGGGGATACACTGTGTTCTCTGGCACTGAT
CCCAATATAAACTCCATACACTACCATGTGCCCGTTTTGGCACCGAATGC
CCATTGGATTAGCTGCGTGCATAGGTGACACTAGGTCACAATTCCAATCA
CTGGAACTGGCATTAACCCATCAGGGACTCTCAGGAGCCGATGTTATGTA
CAACAAGGACATGGCTCGTGATGATCAATGGCTCTTCTGGGTTGGACCCT
TAATAACACGCGGCAATCGCGGGTTTCTACCACCAATTCATCTTGAAAGC
TGGATCTGACAATGCTCTTGGTTAATGGACGATGCACTTCCGTGCTCTGA
TTCTGTTTGGGAAAGAGGATTATGCACATCTTCATGGGGTTAACGATTTG
AAAATGGACAAGAACTACTGGGAAAGAGTGGACGTGAGTTAATTATCAAA
AGGTGAATCATGGTGGGGGCTGTGATTTAATGCTTCAAAGGATGGTACGC
CCAAATGGTATTAGACCATATTGAAGCTTGCTATTCTGGAATCCGCGATG
TTGTTGTAAACACTTAACTTATATTCACTTCTTTGATGTCCCAGAAAAAA
GAATAATCCTGGCTGGTCCGTATAATAGAACTAATTGTACAACGCGGGAC
GCCTAATCATGACTGTTATCTTGGAAACCCTAACCCATTGATTGGCCGCC
TCTTAAAACGCCAGACTTGGAAAACCTGGCGGTCCCAATGGATTTGGGGA
AAAAAATGCCCTTTAGGAATGGGAT
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