EY659612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.691e-37 Identity = 89/229 (38.86%), Postives = 126/229 (55.02%), Query Frame = 3 Query: 96 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKEEISV 779 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR +EVPE++Y + + A V +E +DI+++ +GA + +A + EK+ SV Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSV 231
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.820e-37 Identity = 89/229 (38.86%), Postives = 125/229 (54.59%), Query Frame = 3 Query: 96 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKEEISV 779 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR +EVPE++Y + + A V +E +DI+++ +GA + +A + EK+ SV Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRGPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSV 231
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.551e-35 Identity = 81/181 (44.75%), Postives = 109/181 (60.22%), Query Frame = 3 Query: 204 TTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQA 746 T GL FG++RV +TP+ E G +G A+ A+ G R IAE+ F D+I FDQ++N+ AKFRY G + +TVR YGA HSQS F +PGLK V+P +P AKGLLL+ I D +PV FFE K Y + EVPED Y +PL A++ RE +D+TL G ++ +A Sbjct: 54 TKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQV-PITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSYNMK-GEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEA 232
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.835e-35 Identity = 79/209 (37.80%), Postives = 115/209 (55.02%), Query Frame = 3 Query: 96 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWG 719 +N A+N A+ +ALE D R T GL ++G RV++ P+ E + G +G A G + I EIQF+ + FPA QI AA+ R RS + L VR P G +HS++ EA + + GLK V+P +P KGL L+ I P+PV+FFEPK LYR +E+P D Y +P+ +A +I E S++T+V +G Sbjct: 6 VNNIEALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAP-LVVRMPMGGGIKALEHHSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGEANLISEGSELTIVSYG 213 HSP 2 Score: 24.6386 bits (52), Expect = 4.835e-35 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 779 ELIDLKTLIPWER 817 ELIDL+T+ PW++ Sbjct: 234 ELIDLRTISPWDK 246
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.392e-34 Identity = 77/208 (37.02%), Postives = 115/208 (55.29%), Query Frame = 3 Query: 99 NLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWG 719 N A+ A+ +ALE DP R T GL ++G+ RV++ P+ E + G +G A G + I EIQF+ + FPA QI AA+ R RS + C + VR P G +HS++ EA + + GLK V+P +P KGL L+ + P+PVVFFEPK LYR +E+P D Y +P+ A +I + +++T+V +G Sbjct: 8 NNIEALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFTHAARIRNRSRGVYTCP-IIVRMPMGGGIKALEHHSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPIGQANLISQGNNLTIVSYG 214 HSP 2 Score: 24.6386 bits (52), Expect = 1.392e-34 Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 779 ELIDLKTLIPWER 817 ELIDL+T+ PW++ Sbjct: 235 ELIDLRTISPWDK 247
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.229e-32 Identity = 78/194 (40.21%), Postives = 105/194 (54.12%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKEEISV 779 + T GL FG RV +TP+ E G G +G A G R I E ++ A DQI+N AAK Y SG Q + R P GA HSQ A++ H+PGLKVV+P + AKGLL + IRDPNPV+F E + LY S + DD++LP+ A + R D TLV +G ++ +A + E + I V Sbjct: 173 KVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAP-IVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEVPKLDDFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDV 365
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 4.655e-32 Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSI 734 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ +P S A++++E S++T+V + + + Sbjct: 38 KVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214 HSP 2 Score: 23.8682 bits (50), Expect = 4.655e-32 Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 776 CELIDLKTLIPWERN 820 CELIDL+T+ P + N Sbjct: 229 CELIDLRTIKPLDTN 243
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_PORPU (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra purpurea GN=pdhB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32 Identity = 78/171 (45.61%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLV 710 + T L ++G RV +TP+ E G AIG A G R I E ++ AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L +E+PED+Y++PL AEV+R+ DIT++ Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPEDEYLIPLDKAEVVRKGKDITIL 207
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32 Identity = 85/229 (37.12%), Postives = 119/229 (51.97%), Query Frame = 3 Query: 90 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGG--HYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKE 767 +SL + A+N L AL DP+ R T GL FG SRV +TPL E GIVG AIGLA G R + EIQF ++FP FDQI + AK R + + +R P+G GH G +H ++PEA+F H GL++V P +P A ++ I +PV+FFEP Y EV + LPL + ++R +D T+V W + + +A A +E Sbjct: 15 QSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSM-PVVIRIPHG--GHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRY-WPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGMVPVALRAAEIAAEE 239
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ACOB_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoB PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 6.098e-32 Identity = 82/190 (43.16%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 204 TTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKEEI 773 T GL + G R+ +TPL E VG AIG AA G R IAE+ F D++ FDQI N+AAKFRY G + + +RA GA HSQ F H+PGLKVV P +P KGLL+ IRD +PV+F E K LY L EVPE Y +P +A ++R+ D+++V +G + +A KE I Sbjct: 52 TKGLYAKHG-DRLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAET-PVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFCEHKNLYGLE-GEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEGI 238 The following BLAST results are available for this feature:
BLAST of EY659612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659612 ID=EY659612; Name=EY659612; organism=Citrus sinensis; type=EST; length=926bpback to top |