EY659612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.964e-32 Identity = 81/187 (43.32%), Postives = 105/187 (56.15%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDA 758 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + HVPGLKVV P S KGL+L+ IRD NPV+F E + LY S +VPE +P A+++RE S +T+V + SI + LDA Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKC-PIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPETIEPIPFGQAKILREGSSVTIVTF----SIQVKLALDA 218
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.339e-31 Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSI 734 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPV+F E + LY S +VP+ +P S A++++E S++T+V + + + Sbjct: 38 KVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF-DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKL 214 HSP 2 Score: 22.3274 bits (46), Expect = 1.339e-31 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 776 CELIDLKTLIPWERNN 823 CELIDL+T+ P + ++ Sbjct: 229 CELIDLRTIKPLDTDS 244
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.774e-31 Identity = 80/187 (42.78%), Postives = 105/187 (56.15%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDA 758 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ AFD IVN AAK Y SG Q C + R P GA HSQ+ A + H+PGLKVV P S KGL+L+ IRD NPVVF E + LY S +VP+ +P A+++RE S +T+V + SI + LDA Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKC-PIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSF-DVPKTIEPIPFGQAKILREGSSVTIVTF----SIQVKLALDA 218
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.952e-31 Identity = 75/204 (36.76%), Postives = 111/204 (54.41%), Query Frame = 3 Query: 102 LYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLV 710 LY A+N+ +H +E DP+ + + T GL +++G R+ +TP+ E G AIG A G R I E ++ AF+QI N A Y SG F L VR P G G HSQ E++F VPGL++V +P AKGL+ S IR NP++FFE LY + + +P+ +Y++PL AE++R + IT++ Sbjct: 6 LYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTP-LVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYNIK-ENIPQKEYLVPLEKAELVRSGNQITIL 207
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31 Identity = 88/269 (32.71%), Postives = 135/269 (50.19%), Query Frame = 3 Query: 90 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSV---KEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKEEIS---VN**T*KP*YHGKGTIKASVKKPTTSYTHKPRF 875 K + + A+N A+ + DP+ + + T GL +++G RV++TP+ E G G +G A G + + E ++ A D I+N AAK Y S Q N + R P GA G HSQ A++ VPGLKV+ P S A+GLL + IRDP+PVVF E + LY S +E + + LP+ A++ RE D+T+V + + +A +E IS +N + +P + TI ASV+K + T + F Sbjct: 34 KEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVP-IVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRP--LDRATINASVRKTSRLVTVEEGF 299
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_GRATL (Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria tenuistipitata var. liui GN=pdhB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.150e-30 Identity = 77/186 (41.40%), Postives = 104/186 (55.91%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLD 755 + T L ++G RV +TP+ E +G AIG A G R I E ++ AF+QI N A RY SG F + +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPV+FFE LY L E+P D+Y LPL AE++R+ D+T++ + + QA +D Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIP-IVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYNLK-DELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVD 222
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_PORYE (Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra yezoensis GN=pdhB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.346e-30 Identity = 75/171 (43.86%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLV 710 + T L ++G RV +TP+ E G AIG A G R I E ++ AF+QI N A RY SG F L +R P G G HSQ EA+F +PGLK+V +P AKGLL S IRD NPVVFFE LY L +E+P+++Y LPL+ E +R+ DIT++ Sbjct: 39 KVTKDLHSKYGDLRVLDTPIAENSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLP-LVIRGPGGVGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYNLQ-EEIPQEEYFLPLNKVEFVRKGKDITIL 207
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.833e-29 Identity = 79/218 (36.24%), Postives = 115/218 (52.75%), Query Frame = 3 Query: 96 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQA 746 L +Y A+ +A+ + D R + + T L ++G RV +TP+ E G AIG A G + + E ++ AF+QI N A Y SG ++ L +R P G HSQ EA+F VPGLK+V +P AKGLL + IRD NPV+F E LY L +E+P+ +Y+LPL A+V+RE SD+T++ + L + QA Sbjct: 5 LFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIP-LVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYNLK-QEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQA 220
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28 Identity = 74/187 (39.57%), Postives = 103/187 (55.08%), Query Frame = 3 Query: 198 RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVKEVPEDDYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDA 758 + T GL ++FG RV +TP+ E G G A+G A G R I E ++ A D IVN AAK Y SG Q C + R P GA HSQ+ A + ++PGLKVV P S KGL+++ IRD NPV+F E + LY S ++ E+ +P A+V++E +T+V + SI + LDA Sbjct: 38 KVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRC-PIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSF-DISENVEPIPFGKAKVLKEGDSVTIVTF----SIQVKLALDA 218
BLAST of EY659612 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.406e-28 Identity = 84/234 (35.90%), Postives = 120/234 (51.28%), Query Frame = 3 Query: 90 KSLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQ-FNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWL--YRLSVKEVPED-DYMLPLSDAEVIRECSDITLVGWGAHLSIMEQAXLDAEKEEIS 776 K + + AIN AL L D + + + T GL D++G R+ +TP+ E G G +G A G R I E ++ A D I+N +AK Y SG + FN + R P G G HSQ A++ VPGLKVV P S +GLL S IRD NPVV+ E + L Y+ + + +D +Y++P+ A+V RE D+T+VG+ +S +A KE IS Sbjct: 27 KEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFN--PIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGIS 258 The following BLAST results are available for this feature:
BLAST of EY659612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659612 ID=EY659612; Name=EY659612; organism=Citrus sinensis; type=EST; length=926bpback to top |