EY659604

Overview
NameEY659604
Unique NameEY659604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT8_XENLA (Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+VIDNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  310 VVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            +V DNGTG  K GFAG+  P  + P+VV                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:   10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVG------------------RPRHHGVMVGMNQKDAYVGDEAQSKR---GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT5_XENLA (Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+VIDNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT5_DIPDE (Actin-5 (Fragment) OS=Diphyllobothrium dendriticum GN=ACT5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+VIDNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    3 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 123          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 56/141 (39.72%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  310 VVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            +V DNGTG  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V+NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:   10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 56/141 (39.72%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  310 VVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            +V DNGTG  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V+NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:   10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQKDAYVGDEAQSKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT2_SUIBO (Actin-2 OS=Suillus bovinus GN=ACT2 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+VIDNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    7 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT2_ECHGR (Actin-2 OS=Echinococcus granulosus GN=ACTII PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+VIDNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  310 VVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            +V DNGTG  K GFAG+  P  + P+VV                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:   10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVG------------------RPRHHGVMVGMNQKDAYVGDEAQSKR---GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129          
BLAST of EY659604 vs. ExPASy Swiss-Prot
Match: ACT1_SUIBO (Actin-1 OS=Suillus bovinus GN=ACT1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  307 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETF 723
            A+VIDNG+G  K GFAG+  P  + P++V                      + GVM  +   D ++GDEA +K        L YPI HG V NWD ME+ W    +N LR  PE+H  LLTE+PL    +RE   +IMFETF
Sbjct:    7 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 127          
The following BLAST results are available for this feature:
BLAST of EY659604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ACT8_XENLA1.212e-1940.14Actin, cytoplasmic type 8 OS=Xenopus laevis PE=3 S... [more]
ACT8_ARATH1.212e-1940.43Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2[more]
ACT5_XENLA1.212e-1940.14Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 S... [more]
ACT5_DIPDE1.212e-1940.14Actin-5 (Fragment) OS=Diphyllobothrium dendriticum... [more]
ACT3_ORYSJ1.212e-1939.72Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI1.212e-1939.72Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT2_SUIBO1.212e-1940.14Actin-2 OS=Suillus bovinus GN=ACT2 PE=2 SV=1[more]
ACT2_ECHGR1.212e-1940.14Actin-2 OS=Echinococcus granulosus GN=ACTII PE=3 S... [more]
ACT2_ARATH1.212e-1940.43Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1[more]
ACT1_SUIBO1.212e-1940.14Actin-1 OS=Suillus bovinus GN=ACT1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-A07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659604 ID=EY659604; Name=EY659604; organism=Citrus sinensis; type=EST; length=935bp
CCACGCGTCCGGACAGTGATAGCAATGATGAAGAAGTTGATGAGCGAGGC
TTATCATTTCCATTATCGATGTTGTTGTTGAAATGGGTGTTGGATTTTGT
ACCAACTTACAAAGCTGCCGTGCGTTGAGTCGCTCCTTTCACTTGCGATT
CAAGTCTTTCGTATATCACCATCACCAACACTTTCTTCACGATCATGTTC
CATTGCCTTAACCCTTCTCTCGGATCTCAGTTGCGGATCCCTCGTTACCA
CCACCACCACGATTCTCACCTCCTTTCTCTTTACAATGGACCCCACTTCT
CGTCCTGCCGTCGTCATCGACAACGGCACCGGGTATACTAAGATGGGTTT
TGCGGGTAATGTAGAGCCGTGTTTTATTCTTCCGACTGTAGTAGCTGTAA
ACGAGTCGTTTTTAAATCAATCAAGATCTTCGTCAAAGGCCAATTGGCTT
GCACAGTACAACGCAGGCGTAATGGCCGACCTTGACTTCTTTATTGGAGA
TGAAGCAGTCACAAAATCGCGATCTAGTAGTACCTATAACCTTAGTTATC
CTATTAGGCATGGTCAGGTTGATAATTGGGATGCTATGGAGAGGTATTGG
CAGCAGTGTATATTTAATTACTTGCGTTGTGATCCAGAGGATCACTACTT
TCTGTTGACCGAGAGCCCGCTCACTGCTCCTGAGAGTAGAGAGTATACTG
GTGAGATCATGTTTGAGACTTTTATGTTCCTGGNNCTTATATTGCTGTGA
ATTCNGTGCTTGCACTGCAGCTGGGTACACACATCTAAATGTGAGAGACA
NGAGTTGTGTGGATGTTNGAATGGGGCTACTATGTAGTACAGTCCCAGAG
GGCTTGTCATGGGAGCACATTAGTCGATTCTATTGCTGAAAGATGCACTT
TTTCATCCCAGCTCTGCGGGAAAAGGGAAATATTC
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