EY659602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAAS (30S ribosomal protein S1 OS=Staphylococcus aureus (strain MSSA476) GN=rpsA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAAR (30S ribosomal protein S1 OS=Staphylococcus aureus (strain MRSA252) GN=rpsA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAAN (30S ribosomal protein S1 OS=Staphylococcus aureus (strain N315) GN=rpsA PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAAM (30S ribosomal protein S1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpsA PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAAC (30S ribosomal protein S1 OS=Staphylococcus aureus (strain COL) GN=rpsA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ + L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G +KV I S DR R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RR1_PORYE (30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 36/101 (35.64%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAM-ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKL 340 K + V+E+ + L+LS+R+A+ + + + L +G+++ G + + PYG FI +G + GL+H+S+I+ + I++ + GDT+K +I+ D+ +GR+SLS K L Sbjct: 162 KLLNVEEKSNNLILSHRRALISQASSNLIVGNIIEGIINQITPYGLFIKVGNLKGLVHISEINIKNLEQISSQFKIGDTIKAVIIHVDKKQGRLSLSMKHL 262
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAS1 (30S ribosomal protein S1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D +R++LS + A A+ L G V+ G V L +GAF+DIGG++GL+HVS++SH+ V V+ G+T+ V I S D+ R+SLS K P+P + I+ Sbjct: 157 KVEELDPANNRVILSRKAVEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPEDVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAEQ (30S ribosomal protein S1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpsA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAM---------ADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ A L G V+ G V L +GAFIDIGG++GL+HVS++SH+ V V+ G+ +KV + S ++ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQLENDAKKASILDSLNEGDVIDGKVARLTNFGAFIDIGGVDGLVHVSELSHEHVQTPEEVVSVGEAVKVKVKSVEKDSERISLSIKDTLPTPFENIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_STAHJ (30S ribosomal protein S1 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 44/118 (37.29%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQ---------AQLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K E+D E +R++LS RKA+ ++ L G V+ G V L +GAF+DIGG++GL+HVS++SH+ V V+ G + V + S ++ R+SLS K PTP + I+ Sbjct: 157 KVEELDPENNRVILS-RKAVEQAENDVKKASLLESLNAGDVIKGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVDSPEDVVSVGQEVDVKVKSVEKDAERISLSIKDTLPTPFESIK 273
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_RHIME (30S ribosomal protein S1 OS=Rhizobium meliloti GN=rpsA PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 41/116 (35.34%), Postives = 70/116 (60.34%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMI 364 + +++D+ + +V+S R + +S+A+ L G VV G V+++ YGAF+D+GGI+GLLHV+ ++ RV + +L G +KV I+ ++ R+SL K+LE P D I Sbjct: 161 EILKMDKRRGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGI 276 The following BLAST results are available for this feature:
BLAST of EY659602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659602 ID=EY659602; Name=EY659602; organism=Citrus sinensis; type=EST; length=709bpback to top |