EY659602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_PSEAE (30S ribosomal protein S1 OS=Pseudomonas aeruginosa GN=rpsA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 39/112 (34.82%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAM-ADSQAQ-------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + A++ A+ L G V G V++L YGAF+D+GG++GLLH++ ++ R+ + ++ GD + V +L DR R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRSVLEAENSAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDEIDVKVLKFDRERNRVSLGLKQLGEDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_HAEIN (30S ribosomal protein S1 OS=Haemophilus influenzae GN=rpsA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 39/112 (34.82%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + +Q L GS V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L D+ R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSQEREQVLENLVEGSEVKGVVKNLTEYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEVTVKVLKFDKDRTRVSLGLKQLGQDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_RICFE (30S ribosomal protein S1 OS=Rickettsia felis GN=rpsA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 39/117 (33.33%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K + +D++ +V+S R + +S+++ + G V+ GTV+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ D R+SL K+L+ P + I+ Sbjct: 168 KILSMDKKLDNIVVSRRAILEESRSEARDEMLSKIKEGMVLEGTVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWEAIK 284
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_COXBU (30S ribosomal protein S1 OS=Coxiella burnetii GN=rpsA PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 39/112 (34.82%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAM-----ADSQA---QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D+ ++ +V+S R M A+ QA +L G + G ++++ YGAF+D+GG++GLLH++ ++ RV + +L GD + V +L DR + RVSL K+L P Sbjct: 151 KIIKMDQRRNNVVVSRRAVMEAETSAERQARLEELQEGQEIKGVIKNITDYGAFVDLGGVDGLLHITDMAWGRVKHPSDLLNVGDEVHVKVLKFDRDKKRVSLGMKQLADDP 262
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_BUCBP (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpsA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 40/113 (35.40%), Postives = 71/113 (62.83%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ---------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R+A+ +S+ L G +V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD +K+ IL DR + RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVS-RRAVIESEYNAERNLLLETLQEGLIVSGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGDEVKIKILKFDREKIRVSLGLKQLSDDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_RICCN (30S ribosomal protein S1 OS=Rickettsia conorii GN=rpsA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K + +D++ +V+S R + +S+++ + G V+ GTV+++ YGAFID+G ++GLLH++ IS RV + VL +KVM++ D R+SL K+L+ P + I+ Sbjct: 168 KILSMDKKLGNIVVSRRAILEESRSEARDEMLSKIKEGMVLEGTVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLDFNQKVKVMVIKFDEKNKRISLGIKQLDSNPWEAIK 284
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_MYCTU (30S ribosomal protein S1 OS=Mycobacterium tuberculosis GN=rpsA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +E+D+ ++ +VLS R + +Q++ L G++ G V S+ +GAF+D+GG++GL+HVS++S + + V+Q GD + V +L D R RVSLS K + P Sbjct: 172 KIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDP 283
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: ISPH_CLOAB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 2 Query: 71 RLVLSNRKAMADSQA--QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 R +LS K + +L G VV G V+ L +GAF++I G++GLLHVS+IS RV A VL+ GD +KV +LS D+ ++SLS KKL P Sbjct: 463 RALLSKEKEKVEETVWNKLEEGQVVEGEVKRLTDFGAFVEIEGVDGLLHVSEISWGRVEKPADVLKIGDKIKVYVLSVDKENKKLSLSVKKLTENP 558
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_RICTY (30S ribosomal protein S1 OS=Rickettsia typhi GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 38/117 (32.48%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K + +D++ +V+S R + +S+++ + G ++ G V+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ D R+SL K+L+ P D I+ Sbjct: 168 KILSMDKKLGNIVVSRRVILEESRSEARDEMLSKIKEGMILEGVVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWDAIK 284
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_RICPR (30S ribosomal protein S1 OS=Rickettsia prowazekii GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K + +D++ +V+S R + +S+++ + G V+ G V+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ D R+SL K+L+ P D I+ Sbjct: 168 KILSMDKKLGNIVVSRRVILEESRSEARDEMLSKIKEGIVLEGVVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWDAIK 284 The following BLAST results are available for this feature:
BLAST of EY659602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659602 ID=EY659602; Name=EY659602; organism=Citrus sinensis; type=EST; length=709bpback to top |