EY659602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_PROSP (30S ribosomal protein S1 (Fragment) OS=Providencia sp. GN=rpsA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 40/112 (35.71%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAM-ADSQAQ-------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + ++S A+ L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DR R RVSL K+L P Sbjct: 50 KVIKLDQKRNNVVVSRRAVIESESSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 161
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_MYCLE (30S ribosomal protein S1 OS=Mycobacterium leprae GN=rpsA PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +E+D+ ++ +VLS R + +Q+ QL G++ G V S+ +GAF+D+GG++GL+HVS++S + + V+Q G+ + V +L D R RVSLS K + P Sbjct: 172 KIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSLKATQEDP 283
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_SHIFL (30S ribosomal protein S1 OS=Shigella flexneri GN=rpsA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DR R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_ECOLI (30S ribosomal protein S1 OS=Escherichia coli (strain K12) GN=rpsA PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DR R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_ECOL6 (30S ribosomal protein S1 OS=Escherichia coli O6 GN=rpsA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DR R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_ECO57 (30S ribosomal protein S1 OS=Escherichia coli O157:H7 GN=rpsA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DR R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_BUCAP (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpsA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIRN 370 K +++D++++ +V+S R + + L G + G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V IL D+ R RVSL K+L P I N Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLESLQEGIEIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINVKILKFDKERTRVSLGLKQLGEDPWIAISN 272
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_BUCAI (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpsA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 38/112 (33.93%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQA--------QLGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + + IL DR R RVSL K+L P Sbjct: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMHVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINIKILKFDRERTRVSLGLKQLGEDP 266
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_NEIMB (30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B GN=rpsA PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 37/112 (33.04%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTP 352 K +++D++++ +V+S R + + + L GSV+ G V+++ YGAF+D+GGI+GLLH++ ++ RV + VL+ G ++ +L D+ + RVSL K+L P Sbjct: 156 KVIKLDKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGLLHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDP 267
BLAST of EY659602 vs. ExPASy Swiss-Prot
Match: RS1_RICBR (30S ribosomal protein S1 OS=Rickettsia bellii (strain RML369-C) GN=rpsA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 37/117 (31.62%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 41 KFVEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVIGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVADIATVLQPGDTLKVMILSHDR*RGRVSLSTKKLEPTPGDMIR 367 K + +D++ +V+S R + +S+++ + G ++ GTV+++ YGAFID+G ++GLLH++ IS RV + VL+ +KVM++ + R+SL K+L+ P + I+ Sbjct: 171 KILSMDKKLGNIVVSRRAILEESRSEARDEMLSKIKEGMILEGTVKNITDYGAFIDLGSVDGLLHLTDISWARVNHPSEVLEFNQKVKVMVIKFNEETKRISLGMKQLDYNPWEKIK 287 The following BLAST results are available for this feature:
BLAST of EY659602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659602 ID=EY659602; Name=EY659602; organism=Citrus sinensis; type=EST; length=709bpback to top |