EY659599

Overview
NameEY659599
Unique NameEY659599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_BOVIN (Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.670e-38
Identity = 83/232 (35.78%), Postives = 126/232 (54.31%), Query Frame = 3
Query:  225 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIF-----------LVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEVLN 887
            P R  M H+L+  Y L + M+++KP  A   ++  FH D Y+  L  ++ +   D    ++ + +G DCP  +G+F +     G ++  A  L  G+C +AINW+ G HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGV +AF  T +V   S HKF   F           L +G Y  + +         P+ D I DE Y++  +  + ++    N
Sbjct:   35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNV---------PIQDCIQDERYYHICESVLKEVYIAFN 256          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HDAC8_XENLA (Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.356e-33
Identity = 78/212 (36.79%), Postives = 115/212 (54.25%), Query Frame = 3
Query:  285 QVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIF-----------LVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMMEVLN 887
            +V+KP  A   ++  FH D Y+  L  ++ E   D    L+ + +G DCP+ +G++ +     G ++  A +L  G   IA+NW  G HHAKK EASGFCY+ND VL IL+L ++ +RVLYVD+D+HHGDGV +AF  T +V   S HKF   F           L +G Y  + +         PL DGI D+ Y+   +  + ++    N
Sbjct:    3 RVVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDNDDPETLE-YGLGYDCPITEGIYDYAAAVGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSINV---------PLQDGIQDDKYYQICEGVLKEVFTTFN 204          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_BACSU (Acetoin utilization protein acuC OS=Bacillus subtilis GN=acuC PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.612e-21
Identity = 63/194 (32.47%), Postives = 90/194 (46.39%), Query Frame = 3
Query:  156 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQHE-RVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHK 731
            R   + Y P    Y + Q HP    R+ +T+ LL       +  ++ P  A E +L   H DDY+  +          +  + + + +G ED PVF G+        GG++  A  +  G    A N   GLHH  +  ASGFC  ND  +AI  + K++  RVLY+D D HHGDGV   FY    V   S H+
Sbjct:    2 RDSVFIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTDDYIQAVKLAGAGKLPAE--EGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDNPDVCTLSIHE 193          

HSP 2 Score: 23.8682 bits (50), Expect = 1.612e-21
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  734 RDYFPGTGDIRDIGYSKG 787
            R  FPGTG I++ G  KG
Sbjct:  196 RYLFPGTGQIQEKGSGKG 213          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: HOS1_YEAST (Histone deacetylase HOS1 OS=Saccharomyces cerevisiae GN=HOS1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.824e-21
Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  399 QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLK-QHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKFEIIFLVQGIYVILXIRKESLLPXCPLDDGIDDESYHYFVKPDIXKMME 878
            + K++N+  DCP+F  L  +CQ   G ++     L+     I INW  G HHA K  ASGFCY+ND+VL I  L K +  ++ YVD D+HHGDGV +AF  + ++   S H +E  F   G   +   RK+  +   PL  G DD          +  ++E
Sbjct:  160 ETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFF-PGTGSLSDSRKDKNVVNIPLKHGCDDNYLELIASKIVNPLIE 319          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_STAXY (Acetoin utilization protein acuC OS=Staphylococcus xylosus GN=acuC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.975e-19
Identity = 65/228 (28.51%), Postives = 106/228 (46.49%), Query Frame = 3
Query:  168 YFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNV-GEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELL-KQHERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHKF-EIIFLVQGIYVILXIRKE-SLLPXCPLDDGIDDESY 839
            Y Y  E+  Y +   HP    R+++T  LL   G L+   ++ P  A + +L   HA DY+  +   +     +   + K++ + GED   F  +        GG++  A ++  G      +   GLHH+    A+GFC  ND+ + I  L+ K ++RVL +D D HHGDG   +FYT D+    S H+  + +F   G Y      K        PL+   +D+S+
Sbjct:   10 YVYANELLQYRFSNKHPFNQMRLKLTTELLMELGQLKQHHIISPRIATDDELSLIHAYDYIQAIRHASHGILSEN--EAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGLHHSLPGRANGFCIYNDVAITISYLMQKYNQRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETGKFLFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSF 235          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_STAAC (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain COL) GN=acuC PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.817e-18
Identity = 59/196 (30.10%), Postives = 94/196 (47.96%), Query Frame = 3
Query:  159 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL----NHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHK 731
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A + +L   H  DYV  +   +     +   + K++ + ++    +G F     ++   VGGA+ L      G      +   GLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG   +FY  + V   S H+
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISED--EAKKYGLNDE---ENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHE 197          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_STAAW (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MW2) GN=acuC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.152e-17
Identity = 58/193 (30.05%), Postives = 92/193 (47.67%), Query Frame = 3
Query:  159 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHK 731
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A + +L   H  DYV  +   +     +   + K++ +  E+   F  +     T  GG++  A  +  G      +   GLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG   +FY  + V   S H+
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISED--EAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHE 197          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_STAAS (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MSSA476) GN=acuC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.152e-17
Identity = 58/193 (30.05%), Postives = 92/193 (47.67%), Query Frame = 3
Query:  159 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVG-EDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHK 731
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A + +L   H  DYV  +   +     +   + K++ +  E+   F  +     T  GG++  A  +  G      +   GLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG   +FY  + V   S H+
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVEAIKHASHGIISED--EAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHE 197          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_STAAR (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain MRSA252) GN=acuC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.964e-17
Identity = 62/200 (31.00%), Postives = 97/200 (48.50%), Query Frame = 3
Query:  159 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETH----QDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL----NHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHK 731
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A + +L   H  DYV    +I   +H    +D+ M   ++ + ++    +G F     ++   VGGA+ L      G      +   GLHHA+   ASGFC  NDI +    L K++ +RVL +D D HHGDG   +FY  + V   S H+
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIHKYDYVE---AIKHASHGIISEDEAM---KYGLNDE---ENGQFKHMHRHSATIVGGALTLADLIMSGKALNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHE 197          
BLAST of EY659599 vs. ExPASy Swiss-Prot
Match: ACUC_STAAN (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain N315) GN=acuC PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.376e-17
Identity = 58/196 (29.59%), Postives = 93/196 (47.45%), Query Frame = 3
Query:  159 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLMSITPETHQDQLMQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKL----NHGLCDIAINWARGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGDGVGEAFYTTDRVNDCSXHK 731
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A   +L   H  DYV  +   +     +   + K++ + ++    +G F     ++   VGGA+ L      G      +   GLHHA+   ASGFC  NDI +    + K++ +RVL +D D HHGDG   +FY  + V   S H+
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISED--EAKKYGLNDE---ENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHE 197          
The following BLAST results are available for this feature:
BLAST of EY659599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HDAC8_BOVIN7.670e-3835.78Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 ... [more]
HDAC8_XENLA4.356e-3336.79Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 P... [more]
ACUC_BACSU1.612e-2132.47Acetoin utilization protein acuC OS=Bacillus subti... [more]
HOS1_YEAST3.824e-2136.02Histone deacetylase HOS1 OS=Saccharomyces cerevisi... [more]
ACUC_STAXY7.975e-1928.51Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAC8.817e-1830.10Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAW1.152e-1730.05Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAS1.152e-1730.05Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAR1.964e-1731.00Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAN4.376e-1729.59Acetoin utilization protein acuC OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659599 ID=EY659599; Name=EY659599; organism=Citrus sinensis; type=EST; length=944bp
CGCAAGTTAAGCCCCATCTGTTTTATTCTCTTGAGGTCTCGTCCCGTTGC
ATTCTTAGTTAGTGTTGGCTCTCCCAGTAAGTGCAGGCCCCAAGAAATAT
TATTCATATGGACACTGGAGGCAATTCTTTACCATCTGGTACTGATGGCG
TTAAGAGAAAGGTGTGTTATTTCTACGACCCAGAGGTGGGCAATTACTAC
TATGGACAGGGTCACCCGATGAAACCCCATCGCATTCGTATGACCCATGC
CCTTCTCGCCCACTACGGCTTGCTTCAGAACATGCAGGTCCTCAAACCTT
TTCCTGCTAGGGAAAGGGATCTTTGCCGCTTCCATGCCGATGATTATGTC
TCCTTCCTCATGAGTATCACCCCTGAGACTCATCAGGATCAGCTTATGCA
GCTCAAGCGCTTTAATGTTGGTGAAGATTGCCCTGTCTTTGACGGTCTTT
TCTCCTTCTGTCAAACTTATGCTGGGGGCTCTGTTGGTGGTGCTGTCAAG
TTGAATCACGGCCTCTGTGATATTGCTATCAATTGGGCCCGTGGCCTTCA
TCATGCTAAGAAATGTGAAGCTTCCGGATTCTGTTATGTCAATGACATTG
TCTTGGCCATTTTGGAGCTACTTAAGCAGCATGAGCGTGTATTATATGTA
GATATTGATATCCATCATGGAGATGGCGTTGGAGAAGCATTTTATACAAC
TGATAGGGTAAATGACTGTTCATTNCATAAGTTCGAGATTATTTTCCTGG
TACAGGGGATATACGTGATATTGGNTATTCGAAAGGAAAGTCTACTNCCT
NAATGTCCTCTTGATGATGGNATCGATGATGAAAGCTACCATTACTTTGT
CAAACCCGATATCNGAAAAATGATGGAGGTTTTAAACCTGGTGCTGTGGT
CCTNCATGGGGGGCTGACTCATGTCTGGGGAAAGTTTAGATGCT
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