EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_STRMK (Protein apaG OS=Stenotrophomonas maltophilia (strain K279a) GN=apaG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.373e-19
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I V+V   +++D+S P  G+Y FAY +RI N      +L+ RHW ITDANG+ E++ G GVIGEQP + P   F Y+S   L T  G M+G ++M   D      F   +APF L+
Sbjct:    9 ISVEVAPRFLDDQSAPEDGRYAFAYTIRIHNQGRVAARLVARHWRITDANGRVEHVDGDGVIGEQPRLRPGEDFHYTSGVMLGTDHGTMQGHYDMVADD---GTEFAAPVAPFVLA 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_ACIF5 (Protein apaG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=apaG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.373e-19
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I++ V   Y+ ++S P +  + FAY++ + NN  +  QLL RHWIITDA G  + + G GV+GEQP + P   F Y+S   LSTP G M G FE   V   G ++F V I  F L+
Sbjct:    9 IQISVETRYLPEQSSPEQEHFAFAYQITMQNNGPQTAQLLSRHWIITDAEGHVQEVKGPGVVGEQPTLQPGQRFRYTSGSVLSTPVGSMHGTFEW--VSDTG-ESFVVPIPAFRLA 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_ACIF2 (Protein apaG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=apaG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.373e-19
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I++ V   Y+ ++S P +  + FAY++ + NN  +  QLL RHWIITDA G  + + G GV+GEQP + P   F Y+S   LSTP G M G FE   V   G ++F V I  F L+
Sbjct:    9 IQISVETRYLPEQSSPEQEHFAFAYQITMQNNGPQTAQLLSRHWIITDAEGHVQEVKGPGVVGEQPTLQPGQRFRYTSGSVLSTPVGSMHGTFEW--VSDTG-ESFVVPIPAFRLA 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_VIBSL (Protein apaG OS=Vibrio splendidus (strain LGP32) GN=apaG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I+ QV   YIE++S+P K +Y FAY + I N S+  VQL+ R W+ITD+NGK   I G GV+G+QPVI  N  + Y+S   + TP G M+G + M   D  G   F   + PF L+
Sbjct:    8 IKCQVHSKYIEEQSEPSKNRYVFAYIITIKNLSKTTVQLMSRSWLITDSNGKQLTIEGDGVVGQQPVIEANDEYTYTSGTVIETPVGVMQGHYVM--TDHKGID-FITEVDPFRLA 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSESM (Protein apaG OS=Pseudomonas syringae pv. tomato GN=apaG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            + V V   ++ ++SQP + ++ FAY + + NN E P +LL RHWIITD +G  E + G GV+G+QP+I    S  YSS   ++T  G M+G ++M   D    + F+  I PF L+  G
Sbjct:    8 VDVSVVTRFLAEQSQPEQNRFAFAYTITVHNNGELPAKLLSRHWIITDGDGHVEEVRGEGVVGQQPLIKVGQSHTYSSGTVMTTQVGNMQGSYQMLAED---GKRFDAVIEPFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEE4 (Protein apaG OS=Pseudomonas entomophila (strain L48) GN=apaG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.323e-19
Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            I V V   Y++D+S P   ++ FAY + + NN     +L+ RHW+IT+ +G+ E + G GVIG+QP+I P  S  YSS   +ST  G M+G ++M   D    + F+  IAPF L+  G
Sbjct:    8 IDVSVVTRYLKDQSDPENDRFAFAYTITVQNNGTVKAKLMSRHWLITNGDGEVEEVRGAGVIGQQPLIEPGQSHTYSSGAVISTRVGTMQGSYQMFAED---GKRFDATIAPFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_CAUCR (Protein apaG OS=Caulobacter crescentus GN=apaG PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.087e-18
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T  I V+V   Y  + S P +G Y ++Y V I N+ E  V L+ R W ITD   +   + G GV+GEQP + P  +F Y S CPL TPSG M G ++M  V   G   F+VAI  FSL   G
Sbjct:   16 TRDIVVRVFPTYAAEESSPEQGLYLWSYTVEIENHGEETVTLIARRWTITDGFNRVNEVEGSGVVGEQPELKPREAFRYVSNCPLPTPSGAMRGSYQM--VTDAG-DLFDVAIPEFSLHLPG 134          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEWM (Protein apaG OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=apaG PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.420e-18
Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            I++ V+  YIED+S P   +Y F Y + I N  + PV L  R+W ITD+N     + G GV+GE P I P+T+++Y+S   L TP G MEG++ M        + F   I PF LS  G
Sbjct:    8 IKIDVKTEYIEDQSSPNDERYLFRYTITIINLGKEPVTLKTRYWSITDSNQHLSVVQGAGVVGETPTIEPDTAYQYTSGTVLETPFGVMEGNYGMV---TENGEMFKAKIPPFRLSIPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XANOR (Protein apaG OS=Xanthomonas oryzae pv. oryzae GN=apaG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.854e-18
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            + V+V   ++  +S P +G+Y FAY +RI N    P +L+ RHW ITD NG+TE + G GV+GEQP + P  +F Y+S   L T  G+M+G ++M   D      F   IA F LS
Sbjct:    9 VEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAGAVPARLIARHWQITDGNGRTEQVDGEGVVGEQPRLRPGEAFHYTSGVLLETEQGQMQGHYDMVADD---GTEFIAPIAAFVLS 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XANOP (Protein apaG OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=apaG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.854e-18
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            + V+V   ++  +S P +G+Y FAY +RI N    P +L+ RHW ITD NG+TE + G GV+GEQP + P  +F Y+S   L T  G+M+G ++M   D      F   IA F LS
Sbjct:    9 VEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAGAVPARLIARHWQITDGNGRTEQVDGEGVVGEQPRLRPGEAFHYTSGVLLETEQGQMQGHYDMVADD---GTEFIAPIAAFVLS 121          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_STRMK6.373e-1942.24Protein apaG OS=Stenotrophomonas maltophilia (stra... [more]
APAG_ACIF56.373e-1942.24Protein apaG OS=Acidithiobacillus ferrooxidans (st... [more]
APAG_ACIF26.373e-1942.24Protein apaG OS=Acidithiobacillus ferrooxidans (st... [more]
APAG_VIBSL8.323e-1943.97Protein apaG OS=Vibrio splendidus (strain LGP32) G... [more]
APAG_PSESM8.323e-1938.66Protein apaG OS=Pseudomonas syringae pv. tomato GN... [more]
APAG_PSEE48.323e-1939.50Protein apaG OS=Pseudomonas entomophila (strain L4... [more]
APAG_CAUCR1.087e-1842.62Protein apaG OS=Caulobacter crescentus GN=apaG PE=... [more]
APAG_SHEWM1.420e-1840.34Protein apaG OS=Shewanella woodyi (strain ATCC 519... [more]
APAG_XANOR1.854e-1841.38Protein apaG OS=Xanthomonas oryzae pv. oryzae GN=a... [more]
APAG_XANOP1.854e-1841.38Protein apaG OS=Xanthomonas oryzae pv. oryzae (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
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