EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METPB (Protein apaG OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=apaG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.593e-24
Identity = 54/120 (45.00%), Postives = 70/120 (58.33%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T GI V V   ++E+ S P + +YFFAY V I NN    VQL  RHW I D  G  + + G GV+G+QPV+ P  SF Y+S CPL+TP G M G + M     VG ++F   I  FSL +
Sbjct:    6 TRGITVTVEPRFVEEESSPGESRYFFAYTVEIVNNGSEQVQLRSRHWRIIDGRGACQEVRGAGVVGKQPVLEPGESFSYTSGCPLTTPDGLMAGSYTM---STVGGESFEAEIPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METEP (Protein apaG OS=Methylobacterium extorquens (strain PA1) GN=apaG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T GI V V   ++E+ S P + +YFFAY V I NN    VQL  RHW I D  G  + + G GV+G+QPV+ P  SF Y+S CPL+TP G M G + M     +G ++F   I  FSL +
Sbjct:    6 TRGIMVTVEPRFVEEESSPGESRYFFAYTVEIVNNGSEQVQLRSRHWRIIDGRGACQEVRGAGVVGKQPVLEPGESFSYTSGCPLTTPDGLMAGSYTM---STIGGESFEAEIPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METC4 (Protein apaG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=apaG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.122e-23
Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T GI V V   ++E+ S P + +YFFAY V I NN    VQL  RHW I D  G  + + G GV+G+QPV+ P  SF Y+S CPL+TP G M G + M     +G ++F   I  FSL +
Sbjct:    6 TRGIMVTVEPRFVEEESSPGESRYFFAYTVEIVNNGSEQVQLRSRHWRIIDGRGACQEVRGAGVVGKQPVLEPGESFSYTSGCPLTTPDGLMAGSYTM---STIGGESFEAEIPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METNO (Protein apaG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=apaG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 55/118 (46.61%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 359
            T GI V V   ++E+ S P + +YFFAY V ITNN    VQL  RHW I D  G  + + G GV+G+QPV+ P  SF Y+S CPL TP+G MEG + M   D    ++F   I  FSL
Sbjct:    6 TRGISVIVTPRFVEEESSPDESRYFFAYTVEITNNGRDRVQLRSRHWRIIDGRGALQEVRGAGVVGKQPVLGPGESFSYTSGCPLPTPNGTMEGTYTMATAD---GESFEAVIPAFSL 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEON (Protein apaG OS=Shewanella oneidensis GN=apaG PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.266e-23
Identity = 57/119 (47.90%), Postives = 74/119 (62.18%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            IRV+V+  YIE +S P   +Y F+Y + I N  E+  +L  RHWIITDANGKT  + G GV+GE P I PNT+++Y+S   L TP G M G + M  V   G + FN  I PF L+T G
Sbjct:    8 IRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSGTVLDTPFGIMYGTYGM--VSESG-EHFNAIIKPFRLATPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METRJ (Protein apaG OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=apaG PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.266e-23
Identity = 53/120 (44.17%), Postives = 71/120 (59.17%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T GI V V+  ++E+ S P + +YFFAY V I NN    VQL  RHW I D +G  + + G GV+G+QPV+ P  SF Y+S CPL+TP G M G + M     V  ++F   I  FSL +
Sbjct:    6 TRGISVTVQSRFVEEESSPTESRYFFAYTVEIVNNGSEQVQLRSRHWRIIDGHGACQEVRGTGVVGKQPVLEPGESFCYTSGCPLNTPDGLMAGSYTMA---TVAGESFEAEIPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_ANAD2 (Protein apaG OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=apaG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.275e-23
Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            T GI V VR  +  +RS+P  G++ F+Y VRI N  E P QL+ R WII DA+G+ E ++G GV+G+QP + P   FEY+S C L TP G M G + M   D    Q F+  IAPF L   G
Sbjct:    6 TEGIEVTVRSTFRPERSEP--GRFLFSYTVRIANQGEVPAQLVSRRWIILDASGEREEVVGDGVVGQQPHLEPGEHFEYTSFCVLKTPHGSMRGTYRMVRDD---GQAFDATIAPFPLVVPG 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RHOPT (Protein apaG OS=Rhodopseudomonas palustris (strain TIE-1) GN=apaG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I V V   Y+ +RS     QYF++Y V ITN+ E  V+L  RHW+ITDA+G+T+ + G GV+GEQPV+ P   FEY+S  PL T SG M G ++M   +    + F + + PFSL +
Sbjct:    6 TRRIEVTVEPNYLPERSSAENRQYFWSYTVVITNSGEETVKLRTRHWVITDASGRTQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMAGRYQM---ETEAGEKFEIDVPPFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RHOPA (Protein apaG OS=Rhodopseudomonas palustris GN=apaG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I V V   Y+ +RS     QYF++Y V ITN+ E  V+L  RHW+ITDA+G+T+ + G GV+GEQPV+ P   FEY+S  PL T SG M G ++M   +    + F + + PFSL +
Sbjct:    6 TRRIEVTVEPNYLPERSSAENRQYFWSYTVVITNSGEETVKLRTRHWVITDASGRTQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMAGRYQM---ETEAGEKFEIDVPPFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_AZOC5 (Protein apaG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=apaG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 3
Query:    3 TTLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSL 359
            TT  I+V     Y+ +RS+P +G++F+AY + + N  +  VQL  RHW+ITDA+G  E + G GV+GE+PV+ P   FEY+S  PLSTP+G M G ++M  +   G +TF+V +  FSL
Sbjct:    5 TTRKIQVTATPRYVAERSEPDQGRHFWAYTIEVVNLGKVSVQLKSRHWVITDAHGHVEEVHGAGVVGEEPVLPPGGRFEYTSGVPLSTPTGIMSGHYDM--LAETG-ETFSVEVPAFSL 120          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_METPB8.593e-2445.00Protein apaG OS=Methylobacterium populi (strain AT... [more]
APAG_METEP1.122e-2344.17Protein apaG OS=Methylobacterium extorquens (strai... [more]
APAG_METC41.122e-2344.17Protein apaG OS=Methylobacterium chloromethanicum ... [more]
APAG_METNO1.914e-2346.61Protein apaG OS=Methylobacterium nodulans (strain ... [more]
APAG_SHEON3.266e-2347.90Protein apaG OS=Shewanella oneidensis GN=apaG PE=1... [more]
APAG_METRJ3.266e-2344.17Protein apaG OS=Methylobacterium radiotolerans (st... [more]
APAG_ANAD27.275e-2345.90Protein apaG OS=Anaeromyxobacter dehalogenans (str... [more]
APAG_RHOPT1.241e-2244.17Protein apaG OS=Rhodopseudomonas palustris (strain... [more]
APAG_RHOPA1.241e-2244.17Protein apaG OS=Rhodopseudomonas palustris GN=apaG... [more]
APAG_AZOC51.241e-2244.54Protein apaG OS=Azorhizobium caulinodans (strain A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
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