EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7213 contig Csv1_Contig7213:555..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_CHRVO (Protein apaG OS=Chromobacterium violaceum GN=apaG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEM 299
            + VQ    Y+ ++S      Y FAYRVRITN    P QL+ RHWIITDAN + + + G+GV+GEQP + P   FEYSSA  ++TP G M+G ++M
Sbjct:    8 MEVQAEPQYVAEQSSVANDVYVFAYRVRITNTGSEPAQLISRHWIITDANQQVQEVRGMGVVGEQPHLDPGQVFEYSSAAHITTPYGSMKGAYQM 102          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEMY (Protein apaG OS=Pseudomonas mendocina (strain ymp) GN=apaG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.161e-20
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            I V V   Y+  +SQP + +Y F+Y V I NN + P +LL RHWIITD +G+ + + G GV+G+QP I P  S  YSS   ++T  G M+G ++M   D    + F+  IAPF L+  G
Sbjct:    8 IDVSVTTRYLAAQSQPEQNRYAFSYTVTIVNNGQLPAKLLSRHWIITDGDGRVQEVRGAGVVGQQPDIAPGASHTYSSGTVMATQVGIMQGSYQMLAED---GKRFDATIAPFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METSB (Protein apaG OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=apaG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.161e-20
Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I++ V   +I +RS   +  +F+AY V I N SE+ VQL  RHW ITD NG+ E + G GV+GEQP++ P  +F Y+S   L+TPSG M G + M  VD  G + F+  I  FSL +
Sbjct:    6 TQDIQITVLPEFIPERSNADQAMFFWAYTVEIANQSEKTVQLTARHWKITDGNGRLEEVQGPGVVGEQPILKPGETFRYTSGSNLTTPSGIMTGAYRM--VDENGEE-FDAQIPVFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SERP5 (Protein apaG OS=Serratia proteamaculans (strain 568) GN=apaG PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.517e-20
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 3
Query:   21 VQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            +QV+ VY+E +S P + +Y FAY + I N     VQLL R+W+IT++NG+   + G GV+GEQP+I P   F+Y+S   L TP G MEG +EM  VD  G Q F  AI  F L+
Sbjct:    9 IQVQSVYVESQSIPEEERYVFAYTITIRNLGRFNVQLLGRYWLITNSNGRQTEVQGEGVVGEQPLIPPGGEFQYTSGAILETPLGTMEGHYEM--VDHQG-QPFQTAIPVFRLA 119          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_OLICO (Protein apaG OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=apaG PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.517e-20
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I V V   ++ +RS P K Q+F+AY + I N     VQL  RHW+ITD  G+ + + G GV+GEQPVI P   +EY+S  PL+T SG M G ++M   D    + F++AI  FSL +
Sbjct:    6 TRQIEVLVEPEFLPERSSPEKQQFFWAYSITIVNGGPDSVQLKTRHWVITDGFGQQQEVRGEGVVGEQPVIGPGERYEYTSGVPLTTSSGFMTGSYQMVTED---GEAFDLAIPLFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_BRASO (Protein apaG OS=Bradyrhizobium sp. (strain ORS278) GN=apaG PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.517e-20
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I V V   ++ ++S    G++F++Y V ITN+    VQL  RHW+ITD  G+ + + G GV+GEQPV+ P   FEY+S  PLST SG M G ++M   +    + F++ +  FSL +
Sbjct:    6 TRHIEVTVEPNFLPEKSSVADGRWFWSYTVVITNSGAETVQLRSRHWVITDGAGRQQEVRGEGVVGEQPVLAPGERFEYTSGVPLSTASGFMSGSYQM---ESASGEQFDIVVPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_BRASB (Protein apaG OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=apaG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20
Identity = 49/120 (40.83%), Postives = 73/120 (60.83%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I V V   ++ ++S    G++F++Y V ITN  E  V+L  RHWIITD  G+ + + G GV+GEQPV+ P   FEY+S  PL+T SG M G ++M   +    + F++A+  FSL +
Sbjct:    6 TRQIEVTVEPNFLPEKSSVADGRWFWSYTVVITNTGEDTVKLRSRHWIITDGVGRQQEVRGEGVVGEQPVLAPGERFEYTSGVPLTTASGFMAGSYQM---ESASGEQFDIAVPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_AZOSE (Protein apaG OS=Azoarcus sp. (strain EbN1) GN=apaG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I V+    ++  +S P + +Y FAY + +TN  E P QL+ RHW+ITD  GK + + G+GVIGEQP++ P   F YSS   L TP G M+G ++M   D      F+  I  F L+
Sbjct:    9 IEVEAIAEFVPGQSDPDENRYVFAYHITLTNTGEVPAQLISRHWVITDGAGKVQEVRGLGVIGEQPMLAPGQQFSYSSGSVLETPVGTMQGSYQMAAED---GHRFDAEIPAFMLA 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PROMH (Protein apaG OS=Proteus mirabilis (strain HI4320) GN=apaG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20
Identity = 50/120 (41.67%), Postives = 76/120 (63.33%), Query Frame = 3
Query:    3 TTLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            T+  + +QV+ VYIE +S P + +Y FAY + I N ++  ++LLRR+W+IT+A G T  + G GV+GEQP+I   + + Y+S   L TP G MEG +EM  +D  G + F + I  F L+
Sbjct:    3 TSSKVAIQVQSVYIESQSSPEEQRYVFAYTITIHNLNKHAIRLLRRYWLITNAQGNTTEVQGEGVVGEQPLIEAGSRYRYTSGAVLETPMGTMEGHYEM--IDAQG-RLFQIDIPVFRLA 119          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_BRAJA (Protein apaG OS=Bradyrhizobium japonicum GN=apaG PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20
Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I V V   ++ ++S   + +YF++Y + ITN+ E  VQL  RHWIITDA G+ + + G GV+GEQP + P   FEY+S  PLST SG M G ++M  V   G + F + +  FSL +
Sbjct:    6 TRQIEVTVEPNFVPEQSSADRSRYFWSYTIVITNSGEETVQLKTRHWIITDATGRQQEVKGEGVVGEQPTLAPGERFEYTSGVPLSTASGFMTGRYQM--VSESG-ERFEIDVPTFSLDS 122          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_CHRVO8.893e-2148.42Protein apaG OS=Chromobacterium violaceum GN=apaG ... [more]
APAG_PSEMY1.161e-2042.02Protein apaG OS=Pseudomonas mendocina (strain ymp)... [more]
APAG_METSB1.161e-2044.17Protein apaG OS=Methylocella silvestris (strain BL... [more]
APAG_SERP51.517e-2046.49Protein apaG OS=Serratia proteamaculans (strain 56... [more]
APAG_OLICO1.517e-2043.33Protein apaG OS=Oligotropha carboxidovorans (strai... [more]
APAG_BRASO1.517e-2040.00Protein apaG OS=Bradyrhizobium sp. (strain ORS278)... [more]
APAG_BRASB1.981e-2040.83Protein apaG OS=Bradyrhizobium sp. (strain BTAi1 /... [more]
APAG_AZOSE1.981e-2040.52Protein apaG OS=Azoarcus sp. (strain EbN1) GN=apaG... [more]
APAG_PROMH2.587e-2041.67Protein apaG OS=Proteus mirabilis (strain HI4320) ... [more]
APAG_BRAJA2.587e-2042.50Protein apaG OS=Bradyrhizobium japonicum GN=apaG P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
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