EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7213 contig Csv1_Contig7213:555..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_SHEPW (Protein apaG OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=apaG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            I+V+V+  YIE +S P + +Y F+Y + I N  ++ V L  R+W ITDANG+   + G GV+GE P I PNT+++Y+S   L TP G MEG++ M    +   + F   I+ FSL+  G
Sbjct:    8 IKVEVKTEYIEAQSTPDEEKYLFSYTITIINLGDQDVTLKSRYWCITDANGQQSEVEGAGVVGETPTIKPNTAYQYTSGTVLETPFGVMEGNYTM---IKSNGEEFKAPISAFSLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PARL1 (Protein apaG OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=apaG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 3
Query:    6 TLGIRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLST 365
            T  I + V   Y+ED+S+P +  Y +AY V I N     V+L  R+W ITDA G    + G GV+GEQP++ P   FEY+S  PL  PSG M G++EM+  +    + F V I  FSL +
Sbjct:    6 TRSINILVEPTYLEDQSEPDQDYYVWAYHVTIENKGPETVRLRARYWKITDATGHVHEVRGPGVVGEQPLLRPGEKFEYTSGTPLGAPSGIMFGNYEMETAE---GEKFEVDIPAFSLDS 122          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEAE (Protein apaG OS=Pseudomonas aeruginosa GN=apaG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            + V+V   Y+ ++S P + ++ FAY V I N  E P QLL RHWIITD +G+T+ + G GV+GEQP+I P     Y+S   L+T  G M G ++M   D +    F+ AI  F L+  G
Sbjct:    8 VNVRVDTRYLPEQSAPEQNRFAFAYTVTIENQGEVPAQLLSRHWIITDGDGRTQEVRGAGVVGEQPLIAPGAQHTYTSGTVLATRVGSMRGSYQMLGSDGI---AFDAAIPVFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEAB (Protein apaG OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=apaG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            + V+V   Y+ ++S P + ++ FAY V I N  E P QLL RHWIITD +G+T+ + G GV+GEQP+I P     Y+S   L+T  G M G ++M   D +    F+ AI  F L+  G
Sbjct:    8 VNVRVDTRYLPEQSAPEQNRFAFAYTVTIENQGEVPAQLLSRHWIITDGDGRTQEVRGAGVVGEQPLIAPGAQHTYTSGTVLATRVGSMRGSYQMLGSDGI---AFDAAIPVFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEA8 (Protein apaG OS=Pseudomonas aeruginosa (strain LESB58) GN=apaG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            + V+V   Y+ ++S P + ++ FAY V I N  E P QLL RHWIITD +G+T+ + G GV+GEQP+I P     Y+S   L+T  G M G ++M   D +    F+ AI  F L+  G
Sbjct:    8 VNVRVDTRYLPEQSAPEQNRFAFAYTVTIENQGEVPAQLLSRHWIITDGDGRTQEVRGAGVVGEQPLIAPGAQHTYTSGTVLATRVGSMRGSYQMLGSDGI---AFDAAIPVFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XYLFA (Protein apaG OS=Xylella fastidiosa GN=apaG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.528e-20
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I V +   +++ +S   +G+Y FAY +RI N    P +L+ RHW ITDANGK E + G GVIGEQP + P   F Y+S   L T  G+M+G ++M   D      F   IAPF LS
Sbjct:    9 IEVAISSRFLDHQSNRNEGRYVFAYTIRIYNAGNVPARLIARHWQITDANGKVEYVTGEGVIGEQPRLRPGEEFRYTSGVVLGTEQGQMQGHYDMMADD---GTEFTATIAPFVLS 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_METFK (Protein apaG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=apaG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.528e-20
Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 3
Query:   21 VQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            V+V   ++ D+S   + +Y F Y V I N      QL+ RHWIITDA GKT+ + G+GVIG+QP++ P   F+Y+S   L+TP G M G +   H+       F+  IAPF L+
Sbjct:   11 VKVETAFVPDQSDVEQNRYVFTYTVHIENTGNVAAQLISRHWIITDATGKTQEVRGLGVIGQQPLLQPGERFQYTSGTMLNTPVGEMRGFY---HITAEDGTQFDSEIAPFQLN 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XYLFT (Protein apaG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I V V   +++ +S   +G+Y FAY +RI N    P +L+ RHW ITDANGK E + G GVIGEQP + P   F Y+S   L T  G+M+G ++M   D      F   I+PF LS
Sbjct:    9 IEVAVSSRFLDQQSNRNEGRYVFAYTIRIYNAGNVPARLIARHWQITDANGKVEYVTGEGVIGEQPRLRPGEEFRYTSGVVLGTEQGQMQGHYDMMADD---GTEFTATISPFVLS 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XYLFM (Protein apaG OS=Xylella fastidiosa (strain M12) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I V V   +++ +S   +G+Y FAY +RI N    P +L+ RHW ITDANGK E + G GVIGEQP + P   F Y+S   L T  G+M+G ++M   D      F   I+PF LS
Sbjct:    9 IEVAVSSRFLDQQSNRNEGRYVFAYTIRIYNAGNVPARLIARHWQITDANGKVEYVTGEGVIGEQPRLRPGEEFRYTSGVVLGTEQGQMQGHYDMMADD---GTEFTATISPFVLS 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_XYLF2 (Protein apaG OS=Xylella fastidiosa (strain M23) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20
Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I V V   +++ +S   +G+Y FAY +RI N    P +L+ RHW ITDANGK E + G GVIGEQP + P   F Y+S   L T  G+M+G ++M   D      F   I+PF LS
Sbjct:    9 IEVAVSSRFLDQQSNRNEGRYVFAYTIRIYNAGNVPARLIARHWQITDANGKVEYVTGEGVIGEQPRLRPGEEFRYTSGVVLGTEQGQMQGHYDMMADD---GTEFTATISPFVLS 121          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_SHEPW4.413e-2041.18Protein apaG OS=Shewanella piezotolerans (strain W... [more]
APAG_PARL14.413e-2041.67Protein apaG OS=Parvibaculum lavamentivorans (stra... [more]
APAG_PSEAE5.764e-2041.18Protein apaG OS=Pseudomonas aeruginosa GN=apaG PE=... [more]
APAG_PSEAB5.764e-2041.18Protein apaG OS=Pseudomonas aeruginosa (strain UCB... [more]
APAG_PSEA85.764e-2041.18Protein apaG OS=Pseudomonas aeruginosa (strain LES... [more]
APAG_XYLFA7.528e-2043.10Protein apaG OS=Xylella fastidiosa GN=apaG PE=3 SV... [more]
APAG_METFK7.528e-2041.23Protein apaG OS=Methylobacillus flagellatus (strai... [more]
APAG_XYLFT9.832e-2043.10Protein apaG OS=Xylella fastidiosa (strain Temecul... [more]
APAG_XYLFM9.832e-2043.10Protein apaG OS=Xylella fastidiosa (strain M12) GN... [more]
APAG_XYLF29.832e-2043.10Protein apaG OS=Xylella fastidiosa (strain M23) GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
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