EY659595

Overview
NameEY659595
Unique NameEY659595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7213 contig Csv1_Contig7213:555..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_RALSO (Protein apaG OS=Ralstonia solanacearum GN=apaG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20
Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDF 293
            + VQVR  Y+ ++S+P + QY FAY + I N  E P QL+ RHW+ITDA    + + G+GV+G QP++ P  SFEY+S   + TP G M G++
Sbjct:    6 LTVQVRTRYLPEQSEPSQDQYAFAYTITIRNTGEVPSQLVSRHWVITDAESHVQEVAGLGVVGHQPLLPPGESFEYTSWATIKTPVGTMRGEY 98          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_VIBCM (Protein apaG OS=Vibrio cholerae serotype O1 (strain M66-2) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I++QV+  YIE++S P   ++ FAY + I N S + VQL+ R W+ITDA+GK   + G GV+GEQP I  N  + YSS   L TP G M+G + M  +D  G ++F V I PF L+
Sbjct:    8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLM--IDEQG-ESFTVEIEPFRLA 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_VIBCH (Protein apaG OS=Vibrio cholerae GN=apaG PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I++QV+  YIE++S P   ++ FAY + I N S + VQL+ R W+ITDA+GK   + G GV+GEQP I  N  + YSS   L TP G M+G + M  +D  G ++F V I PF L+
Sbjct:    8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLM--IDEQG-ESFTVEIEPFRLA 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_VIBC3 (Protein apaG OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I++QV+  YIE++S P   ++ FAY + I N S + VQL+ R W+ITDA+GK   + G GV+GEQP I  N  + YSS   L TP G M+G + M  +D  G ++F V I PF L+
Sbjct:    8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLM--IDEQG-ESFTVEIEPFRLA 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEF5 (Protein apaG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            + V V   ++ D+SQP + ++ FAY + + NN   P +LL RHW+ITD +G  E + G GV+G+QP+I    S  YSS   ++T  G M+G ++M   D    + F+  IAPF L+  G
Sbjct:    8 VDVSVVTRFLADQSQPEQNRFAFAYTITVQNNGSLPAKLLSRHWVITDGDGHVEEVRGAGVVGQQPLIAAGKSHTYSSGTVMTTRVGNMQGSYQMLAED---GKQFDAVIAPFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_NITEU (Protein apaG OS=Nitrosomonas europaea GN=apaG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I+V+VR +Y+ D+S P   +Y FAY + I N      QL+ RHWIIT  +G T  + G+GV+GEQP++ P  +FEY+S   +S+ +G M+G ++M   D      F+V I  F LS
Sbjct:    9 IKVEVRTIYLPDQSDPEAERYVFAYTITINNTGSVASQLVSRHWIITSGDGVTREVRGLGVVGEQPLLKPGETFEYTSGTAISSIAGSMKGSYQMVAED---GFHFSVEIPEFILS 121          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_AZOVD (Protein apaG OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=apaG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            I V V   Y+ ++SQP + +Y FAY V I NN   P QLL RHW+ITD +G  + + G GVIG QP++ P  S  Y S+  L+T  G M+G ++M   D      F+  I PF L+  G
Sbjct:    8 IDVSVETRYLPEQSQPEQNRYVFAYSVTIRNNGLLPAQLLSRHWLITDGDGHVQEVRGPGVIGTQPLLGPGQSHNYDSSTLLATQVGTMQGSYQMVAED---GHAFDAPIRPFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_VIBPA (Protein apaG OS=Vibrio parahaemolyticus GN=apaG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.677e-19
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            I++QV   YIE++S P   ++ FAY + I N S++ VQL+ R W+ITD+NGK   + G GV+G+QP I  N  + YSS   L TP G M+G ++M  +D  G Q F   I PF L+
Sbjct:    8 IKIQVHTKYIEEQSNPELQRFVFAYVITIKNLSQQTVQLISRRWLITDSNGKQMTVEGEGVVGQQPFIPSNDEYTYSSGTALETPVGVMQGHYKM--LDEKG-QEFITEIEPFRLA 120          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PSEFS (Protein apaG OS=Pseudomonas fluorescens (strain SBW25) GN=apaG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.677e-19
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 3
Query:   15 IRVQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLSTMG 371
            I V V   ++ D+SQP + ++ FAY + + NN   P +LL RHW+ITD +G+ E + G GV+G+QP+I    S  YSS   +++  G M+G ++MK  D    + F+  IAPF L+  G
Sbjct:    8 IDVSVVTRFLADQSQPEQNRFAFAYTITVKNNGLVPAKLLSRHWVITDGDGQVEEVRGAGVVGQQPLIDIGASHTYSSGTVMTSKVGTMQGSYQMKATD---GKLFDAIIAPFRLAVPG 123          
BLAST of EY659595 vs. ExPASy Swiss-Prot
Match: APAG_PECCP (Protein apaG OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=apaG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.677e-19
Identity = 47/114 (41.23%), Postives = 71/114 (62.28%), Query Frame = 3
Query:   21 VQVRRVYIEDRSQPLKGQYFFAYRVRITNNSERPVQLLRRHWIITDANGKTENILGVGVIGEQPVILPNTSFEYSSACPLSTPSGRMEGDFEMKHVDRVGSQTFNVAIAPFSLS 362
            VQV+  Y+E +S+P + ++ FAY + + N     VQLL R+W+IT+ NG+   + G GV+GEQP+I P + F+Y+S   + TP G MEG + M   D  G + F V+I  F L+
Sbjct:    9 VQVQSFYVESQSEPDEERFVFAYTITVRNLGRHEVQLLGRYWLITNGNGRQTEVQGEGVVGEQPIIHPGSEFQYTSGAVIETPLGTMEGHYHM--TDHQG-KAFQVSIPVFRLA 119          
The following BLAST results are available for this feature:
BLAST of EY659595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
APAG_RALSO9.832e-2045.16Protein apaG OS=Ralstonia solanacearum GN=apaG PE=... [more]
APAG_VIBCM1.284e-1944.83Protein apaG OS=Vibrio cholerae serotype O1 (strai... [more]
APAG_VIBCH1.284e-1944.83Protein apaG OS=Vibrio cholerae GN=apaG PE=1 SV=1[more]
APAG_VIBC31.284e-1944.83Protein apaG OS=Vibrio cholerae serotype O1 (strai... [more]
APAG_PSEF51.284e-1938.66Protein apaG OS=Pseudomonas fluorescens (strain Pf... [more]
APAG_NITEU1.284e-1941.38Protein apaG OS=Nitrosomonas europaea GN=apaG PE=3... [more]
APAG_AZOVD1.284e-1942.02Protein apaG OS=Azotobacter vinelandii (strain DJ ... [more]
APAG_VIBPA1.677e-1943.97Protein apaG OS=Vibrio parahaemolyticus GN=apaG PE... [more]
APAG_PSEFS1.677e-1939.50Protein apaG OS=Pseudomonas fluorescens (strain SB... [more]
APAG_PECCP1.677e-1941.23Protein apaG OS=Pectobacterium carotovorum subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659595 ID=EY659595; Name=EY659595; organism=Citrus sinensis; type=EST; length=606bp
CAACAACCTTGGGGATAAGGGTTCAAGTTAGACGTGTGTACATTGAGGAC
CGTAGTCAACCTTTGAAGGGGCAGTACTTTTTCGCATATAGGGTAAGAAT
TACCAATAACTCAGAACGTCCTGTTCAACTTCTCAGACGGCATTGGATTA
TCACAGATGCAAACGGAAAAACTGAAAACATCTTAGGAGTTGGAGTCATT
GGTGAACAGCCAGTTATACTTCCTAATACCAGTTTTGAATACTCTTCAGC
ATGCCCTTTAAGCACTCCGAGTGGCAGAATGGAAGGTGATTTTGAGATGA
AACATGTTGATAGAGTAGGTTCACAAACTTTCAATGTGGCGATTGCACCT
TTTTCTCTATCCACAATGGGTGATGACAGTGATTCTTTTTAGAACTGGTA
TTAGGCGTCTCTGTGGAGGGTTGAGGCGCCATATCCCTGTCATGGTTGAT
TATTTTCAGAATTATAAATCAATGCATTGCAATATGTAAGTGTAATTATT
GGTCTATAAGCTCTTCATTTGTTTCTCTGCAAGGATCATATGTAGCAAAC
TTTCAAAAGAAATCAATTAATAATAAGTGTATTATAGCTAAAAAAAAAAA
AAAAAA
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