EY659592

Overview
NameEY659592
Unique NameEY659592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10175 contig Csv1_Contig10175:43..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659592 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.449e-43
Identity = 94/216 (43.52%), Postives = 135/216 (62.50%), Query Frame = 3 
Query:   36 SKSKILSIGGTGYIGKFIVEASVKAGHPTFVLVRESTLSAPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDXSVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKSFTLNP 677
            +K++ L +GGTG+IG+FI +AS+  G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D   I GDGN KA +   +DIG +T+K +DD RTLNK+    P
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRP 225
The following BLAST results are available for this feature:
BLAST of EY659592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN4.449e-4343.52Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659592 ID=EY659592; Name=EY659592; organism=Citrus sinensis; type=EST; length=915bp
CCCGAAATTGAACTGAACAAGTCTCGGTAATGGCGTCGAAAAGCAAGATT
CTATCGATCGGTGGGACAGGGTACATCGGCAAATTCATCGTCGAAGCGAG
CGTGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGAGAATCCACACTCT
CCGCTCCTTCCAAATCTCAGCTCCTCGATCACTTCAAAAAACTCGGCGTC
AATCTCGTCATCGGAGATGTGTTGAATCACGAGAGCTTGGTGAAGGCGAT
AAAACAAGTGGACGTGGTGATATCAACGGTCGGTCACACTTTATTAGGTG
ATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCTGGTAACATTAAGAGA
TTCTTCCCTTCAGAATTTGGGAATGATGTTGATCGAGTCCATGCCGTTGA
GCCAGCAAAATCAGCATTTGCCACAAAGGCGAAAATCCGCCGAGCCGTTG
AGGCTGAAGGGATTCCGTATACTTATGTAGCGTCGAATTTCTTTGCTGCT
TACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCACTGCCCCACCTAGGGA
TNAAAGTGTCATCTTAGGCGATGGAAATCCTAAAGCTGTTTATAACAAGG
AAGATGATATTGGAACCTATACTATCAAAGCGGTTGATGATCCCAGAACC
TTGAACAAATCCTTTACATTAAACCCCCTGGTAATATTTACTCATTCAAT
GGATCTGTGTCCCTGTGGGAGAGAAAGATGGGCAAATCCCTCGAAAGGGT
GTANCGTTCGGAGGGAGCAGTNCTAAAGAATATTCANGAAGCTGCACCTC
CAGTCAATGGGATATTATCAATTCAGACTCTGCTTTCGTGGAGGGAGATC
AAACCACTTNCAGATGAAACATCGNTTGGAGTTGAGNCTCGAGCTTTTTC
TCAGTCAGTACCTAC
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