EY659590

Overview
NameEY659590
Unique NameEY659590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5270 contig Csv1_Contig5270:177..1102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659590 vs. ExPASy Swiss-Prot
Match: ROCK2_BOVIN (Rho-associated protein kinase 2 OS=Bos taurus GN=ROCK2 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.548e-11
Identity = 26/68 (38.24%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  491 EQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCRENATGHVYAMKKLKKSEMLRR 694
            +  N+  +L + E    +++  +M A+D++ + +IG+GAFGEV++ R  A+  VYAMK L K EM++R
Sbjct:   64 KNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKR 131          

HSP 2 Score: 31.5722 bits (70), Expect = 3.548e-11
Identity = 11/29 (37.93%), Postives = 22/29 (75.86%), Query Frame = 1
Query:  721 RNLLAEXDXHCIGKLYCSFPDDEYLYLIM 807
            R+++A  +   + +L+C+F DD+YLY++M
Sbjct:  141 RDIMAFANSPWVVQLFCAFQDDKYLYMVM 169          

HSP 3 Score: 21.9422 bits (45), Expect = 3.548e-11
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 3
Query:  807 EYLPGGSMMTLLMRRD 854
            EY+PGG ++ L+   D
Sbjct:  170 EYMPGGDLVNLMSNYD 185          
BLAST of EY659590 vs. ExPASy Swiss-Prot
Match: ROCK2_MOUSE (Rho-associated protein kinase 2 OS=Mus musculus GN=Rock2 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.581e-11
Identity = 26/68 (38.24%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  491 EQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCRENATGHVYAMKKLKKSEMLRR 694
            +  N+  +L + E    +++  +M A+D++ + +IG+GAFGEV++ R  A+  VYAMK L K EM++R
Sbjct:   64 KNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKR 131          

HSP 2 Score: 31.187 bits (69), Expect = 4.581e-11
Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  721 RNLLAEXDXHCIGKLYCSFPDDEYLYLIM 807
            R+++A  +   + +L+C+F DD YLY++M
Sbjct:  141 RDIMAFANSPWVVQLFCAFQDDRYLYMVM 169          

HSP 3 Score: 21.9422 bits (45), Expect = 4.581e-11
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 3
Query:  807 EYLPGGSMMTLLMRRD 854
            EY+PGG ++ L+   D
Sbjct:  170 EYMPGGDLVNLMSNYD 185          
BLAST of EY659590 vs. ExPASy Swiss-Prot
Match: ROCK2_RAT (Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.582e-11
Identity = 26/68 (38.24%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  491 EQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCRENATGHVYAMKKLKKSEMLRR 694
            +  N+  +L + E    +++  +M A+D++ + +IG+GAFGEV++ R  A+  VYAMK L K EM++R
Sbjct:   55 KNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKR 122          

HSP 2 Score: 31.187 bits (69), Expect = 4.582e-11
Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  721 RNLLAEXDXHCIGKLYCSFPDDEYLYLIM 807
            R+++A  +   + +L+C+F DD YLY++M
Sbjct:  132 RDIMAFANSPWVVQLFCAFQDDRYLYMVM 160          

HSP 3 Score: 21.9422 bits (45), Expect = 4.582e-11
Identity = 7/16 (43.75%), Postives = 11/16 (68.75%), Query Frame = 3
Query:  807 EYLPGGSMMTLLMRRD 854
            EY+PGG ++ L+   D
Sbjct:  161 EYMPGGDLVNLMSNYD 176          
BLAST of EY659590 vs. ExPASy Swiss-Prot
Match: SID2_SCHPO (Serine/threonine-protein kinase sid2 OS=Schizosaccharomyces pombe GN=sid2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.674e-11
Identity = 41/156 (26.28%), Postives = 75/156 (48.08%), Query Frame = 2
Query:  335 EEVPSNVTKQKVAAAKQYIENHYKKQMKSLEERKERRNILEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCRENATGHVYAMKKLKKSEMLRRGQVEHVKAEEXXXXXXXXXXXXXXXXPFQMTS-IYI 799
            E+V     K+     + +  +HY +Q+  L  RK+R  + E++L     S  ++  L+K    +E  Y+R +R ++   DF+ +T +G+G +G V + R+  T  + A+K + KS + +  ++ HV  E                  FQ TS IY+
Sbjct:  130 EKVVQPKVKRMATICQMFFLDHYFEQLHYLYTRKQRARLFEEQLLKEPDSRRDE--LVKRYNGRERVYLRKRRTRISHGDFQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLHKMDEIRHVLTERDILTTANSEWLVRLLYAFQDTSNIYL 283          

HSP 2 Score: 20.7866 bits (42), Expect = 7.674e-11
Identity = 8/20 (40.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  807 EYLPGGSMMTLLMRRDTLTE 866
            E++PGG   TLL     L +
Sbjct:  286 EFVPGGDFRTLLSNSGVLRD 305          
The following BLAST results are available for this feature:
BLAST of EY659590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ROCK2_BOVIN3.548e-1138.24Rho-associated protein kinase 2 OS=Bos taurus GN=R... [more]
ROCK2_MOUSE4.581e-1138.24Rho-associated protein kinase 2 OS=Mus musculus GN... [more]
ROCK2_RAT4.582e-1138.24Rho-associated protein kinase 2 OS=Rattus norvegic... [more]
SID2_SCHPO7.674e-1126.28Serine/threonine-protein kinase sid2 OS=Schizosacc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-H04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659590 ID=EY659590; Name=EY659590; organism=Citrus sinensis; type=EST; length=925bp
CTTTCATTTGTTGTGACCGAAAATCGCGGGTTTCTTTAATTTGTCTCAGG
ATAGCAGATCTTTGATACTCTGGGAATCCTTGATTCGAATGAACCTAAAT
GTTTCCGTTTGTGAAATGAGATTCGTGATTGATGAGAGTATATTTTTCAG
TAATTTCTCAAATAATTTGTACATTTAGGAGTGTGACCGTCGGGGAAAGT
CATATATAGATTTGAAAAAAATGGACTCTGCAAGATGTTGGTTTAACAAG
CTGAGGTCAAAAGACAAGGTAAAGCCTTCCAAGAAAAAGGAAACTGCAGG
CCATGGAAAGGAGGTGTCAAAAGCTCAAACAAGTGAAGAAGTTCCATCAA
ATGTTACCAAGCAGAAGGTTGCAGCTGCAAAACAGTATATTGAAAACCAT
TACAAGAAGCAGATGAAAAGCCTCGAGGAGAGGAAGGAGCGACGCAATAT
TTTGGAAAAGAAGTTAGCTGATGCAGAGGTTTCTGAGGAAGAGCAAAATA
ATTTACTAAAGTATTTAGAGAAGAAGGAAACGGAATACATGCGCCTTCAG
AGGCATAAAATGGGTGCTGATGATTTTGAGCCATTGACCATGATAGGGAA
GGGTGCATTTGGAGAGGTTAGAGTATGTAGGGAGAATGCAACCGGCCATG
TATATGCTATGAAAAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGACAG
GTTGAACATGTGAAAGCTGAAGAAATCTACTTGCTGAAGNTGATAGNCAT
TGTATTGGTAAGCTATATTGTTCCTTTCCAGATGACGAGTATCTATATCT
GATTATGAATATCTACCTGGTGGNAGTATGATGACTTTACTGATGCGTAG
GGACACATTGACTGAAAGGAAGCCAGNTTTATTGTTGGGAAACTGTNCTA
GCTATTGATCTTNCCTAAACATAAT
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