EY659581

Overview
NameEY659581
Unique NameEY659581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659581 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.199e-15
Identity = 60/150 (40.00%), Postives = 76/150 (50.67%), Query Frame = 1 
Query:  364 LKASFRNVGLNDNFDLVALSGAHTFGRAQCRFFSVRLFNFNNTGNPDPTLDATFLQQLRQLCPQCGNGSVLTY-LDVTTPNVFDNKYFSNLINRKGLLQSDQELFSTPRADTIDIVNVFRQNQAAFLKRLCDFHG*NADSKPLNGNEWEI 810
            L +SF N  L D  DLV+LSGAHTFG A C  F  R     +    +P +D  F   LR  C        LT  LDV TP+VFDNKY+ +LI R+GL +SDQ L   P   T  +   F  NQ AF ++        ++   L G + EI
Sbjct:    3 LISSFANRSL-DVADLVSLSGAHTFGVAHCPAFEDRSSRVRH----NPAIDGKFATALRNKCSGDNPSGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHP--TTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEI 145
The following BLAST results are available for this feature:
BLAST of EY659581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER2_HORVU7.199e-1540.00Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-G06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659581 ID=EY659581; Name=EY659581; organism=Citrus sinensis; type=EST; length=961bp
TTCCGNATTCCAGGCTCGACCCACGCGTCCGCAGGCTTCTTTTCCATGAC
TGTTTTGTTAATGGCTCGTGATGCATCAGTTTTGTTGGACAACACTACAA
CCATAGACAGTGAGAAATTTGCTGCGCCAAATAATAATTCGGCGAGGGGT
TTTGAAGTTATTGATCAGATGAAAGCTGCCGTTGAAAAGGCCTGTCCAAG
GGTTGTTTCCTGTGCTGATATTCTCACTATTGCAGCTGAACAATCTGTTG
CTTTGTCAGGGGGTCCTTCGTGGACAAATCTATTGGGAAGAAGAGACAGC
AGAACAGCAAACAGAACTCTTGCAAATCAGAATCTTCCATCACCGTTTGA
TACTCTTGACAGGCTCAAAGCTAGTTTTAGAAATGTCGGCCTCAACGATA
ATTTTGATCTTGTTGCACTCTCCGGAGCTCACACATTTGGAAGGGCTCAG
TGCCGATTTTTCAGCGTAAGATTATTCAATTTCAACAACACTGGCAATCC
AGACCCAACCCTAGACGCAACCTTCTTACAACAACTGAGGCAACTATGCC
CACAATGTGGAAACGGCAGCGTTCTAACATATTTAGACGTCACAACACCT
AATGTTTTCGACAACAAATACTTCTCCAATCTCATAAACCGCAAAGGCCT
CCTGCAGAGTGATCAAGAGCTGTTTTCGACTCCCCGGGCCGATACCATTG
ACATTGTCAATGTCTTTCGCCAGAACCAGGCTGCTTTCCTTAAAAGACTT
TGTGACTTCCATGGATAGAATGCGGATTCGAAACCACTGAACGGAAATGA
GTGGGAGATTANATGGACTGCAGGAGGGTAATGGAAACGCACTTTCGGAA
CAGAATATCTTCGCAGAGGGGTAACAACAGCTCTTTCAAAATGCCTGGTA
CCCTTTGTTTTTGGTTGGGCCTGGAGGGGACCGTTTGTTTTCCCAAAAAT
AAACAAACCCG
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