EY659577

Overview
NameEY659577
Unique NameEY659577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FAM50_DROPS (Protein FAM50 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA11514 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.351e-16
Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASG---------CTQLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG   N ++  G         C +LL  EF E+++      +Y KEDLI+PH +  Y+ I  KARG SGPLF FDVH+DVR I+  ++EK+ES  GK
Sbjct:  215 FSYWDGSGHRRNVQMKKGNSIYQFLQKCLELLRKEFIELKTVMADQLMYVKEDLILPHHYSFYDFIVTKARGKSGPLFQFDVHDDVRMISDASVEKEESHAGK 317          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FAM50_DROME (Protein FAM50 homolog OS=Drosophila melanogaster GN=CG12259 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.415e-15
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASG---------CTQLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG   N  +  G         C +LL  EF E+++      +Y KEDLI+PH +  Y+ I  KARG SGPLF FDVH+DVR I+  ++EK+ES  GK
Sbjct:  216 FSYWDGSGHRRNVLMKKGNSIYQFLQKCLELLRKEFIELKTVMADQLMYVKEDLILPHHYSFYDFIVTKARGKSGPLFQFDVHDDVRMISDASVEKEESHAGK 318          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50B_HUMAN (Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.415e-15
Identity = 47/103 (45.63%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG     RV  G T         Q L  +F E+RSA V   ++ KEDLI+PH H  Y+ I  +ARG SGPLF FDVH+DVR ++   +EKDES  GK
Sbjct:  189 FSYWDGSGHRRTVRVRKGNTVQQFLKKALQGLRKDFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIARARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGK 291          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FAM50_DICDI (Protein FAM50 homolog OS=Dictyostelium discoideum GN=fam50 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.376e-15
Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT-----QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGEA 783
            Y+ + GSG   + + + G T     +    EF+E+R  SV   ++ KED+IIPH +  Y+L+ +KARG SGPLF FDVH DVR +    +EK+ES   K  E+
Sbjct:  219 YSFWDGSGHRRSMKCSKGTTIERFLENARKEFKELRGVSVDKLMFIKEDIIIPHNYSFYDLMLSKARGKSGPLFRFDVHEDVRLVNDATVEKEESHAAKMVES 321          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50B_MACFA (Protein FAM50B OS=Macaca fascicularis GN=FAM50B PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.564e-14
Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG     RV  G T         Q    +F E+RSA V   ++ KEDLI+PH H  Y+ I  KARG S PLF+FDVH+DVR ++   +EKDES  GK
Sbjct:  189 FSYWDGSGHRRTVRVRKGNTVQQFLKKALQGQRKDFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIAKARGKSRPLFNFDVHDDVRLLSDATMEKDESHAGK 291          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FAM50_ANOGA (Protein FAM50 homolog OS=Anopheles gambiae GN=AGAP002062 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.944e-14
Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  544 CTQLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            C ++L  +F E+++      +Y KEDLI+PH +  Y+ I  KARG SGPLF+FDV++D+R I+  ++EK++S  GK
Sbjct:  244 CLEMLRKDFSELKTVMADQLMYVKEDLILPHHYTFYDFIVTKARGKSGPLFNFDVYDDIRMISDASVEKEDSHAGK 319          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FAM50_AEDAE (Protein FAM50 homolog OS=Aedes aegypti GN=AAEL010045 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.014e-13
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  544 CTQLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            C ++L  EF E+++      +Y KEDLI+PH +  Y+ I  KARG SGPLF FDV +D+R I+  ++EK+E+  GK
Sbjct:  233 CLEMLRKEFSELKTVMADQLMYVKEDLILPHHYTFYDFIVTKARGKSGPLFSFDVKDDIRMISDASVEKEETHAGK 308          
The following BLAST results are available for this feature:
BLAST of EY659577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
FAM50_DROPS6.351e-1642.72Protein FAM50 homolog OS=Drosophila pseudoobscura ... [more]
FAM50_DROME1.415e-1542.72Protein FAM50 homolog OS=Drosophila melanogaster G... [more]
FA50B_HUMAN1.415e-1545.63Protein FAM50B OS=Homo sapiens GN=FAM50B PE=2 SV=1[more]
FAM50_DICDI5.376e-1541.75Protein FAM50 homolog OS=Dictyostelium discoideum ... [more]
FA50B_MACFA1.564e-1444.66Protein FAM50B OS=Macaca fascicularis GN=FAM50B PE... [more]
FAM50_ANOGA5.944e-1444.74Protein FAM50 homolog OS=Anopheles gambiae GN=AGAP... [more]
FAM50_AEDAE1.014e-1346.05Protein FAM50 homolog OS=Aedes aegypti GN=AAEL0100... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659577 ID=EY659577; Name=EY659577; organism=Citrus sinensis; type=EST; length=945bp
GCCAGCCCTGGTCTCCTCCAGTTTGGTTCAAGTACCTGCCGAAATTCTAG
AAACTGCGTTTAAGAAGGAAACCGTATGTTTATTCACCAGAGAGGAATAC
GTTGAGAAGATGGTTAGTATTCGGAGCATGATTGAATAGGAAGATGAGGA
GAAGCTTCAGAAGCTACTACAAGAGGAATAGGAGCTGCAATTGGAAAAGC
GTATAAAGCGAAAGATTAAGGGAAATTCTCGATTATCATTTGCTGATGAT
TTTGAGAGTGAAAATGAATAGGAGAATGGAGAAAGTGAAAATTTGAAAAC
AAAGAGGCTTGCGCATGCGAAATTGGGATAAGATCCGACAGTGGAGACTA
GCTTTTTGCCTGACAGTGAGATAGATGCACATGAGCAATCTGATCGTGAA
CGGCTGCAGCGACTGTGGCTTCGTGAGCAGGAGCTTATTCGAAATGAACC
CCTTCAAATCACTTATAGTTCTTGGGATGGAGCAGGCCATACACGAGTTA
TCCAGGTTCGGGACGGTGATACAATAAGAGAGTTGCTTCGGGCTGTACAC
AACTACTGGCACCTGAGTTTCGAGAAATGCGATCAGCGTCAGTGGGAAAT
CNGCTCTATGATAAAGAAGATCTTATCATCCCTCATCAACACAAGTTATA
TGAGCTTATTGGTAACAAAGCCCGTGGAATAAGCGGACCGCTTTTTCACT
TTGATGTTCACAATGATGTACGGACCATTGCTTGGTGCGCTTTGGAAAAA
GATGAATCCATGCTGGGAAAGTGTGGAGAGGCCCTGGTTTTATAAAACCA
ACCTATTTTCCCTGGCTTTTGTGGGGGTTTCTGACCCACTAGAATGGGGG
CGGTCCCCTCCATGGGGTTGGTCCCCGGCTGGGCAATAAATTTTTTGAAC
AATTGTCTGTTACCGGAGGGCTTAATTGGACTTTTGGGCCTTTAA
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