EY659569

Overview
NameEY659569
Unique NameEY659569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_CHICK (Eukaryotic translation initiation factor 3 subunit H OS=Gallus gallus GN=EIF3H PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.948e-36
Identity = 77/174 (44.25%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++ + D   YQ+EMMR LR VN+D+  VGWYQST  G F T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++ ++FEE+P  +   +L+
Sbjct:   35 VQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLI 207          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPTN (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_00190 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.795e-36
Identity = 81/194 (41.75%), Postives = 113/194 (58.25%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADG-------------AN--YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWT 612
            PL  V++E LV++KIIKHC +  P   TG ++G+D    LE+TN FPFP+ E   E   D              AN  YQ EM+R LREVNVD N VGWY S  +G F    +IE    YQ+ +  R V +++D SRS QG+L+ +A +LS  FM  ++ N FT E+L++  L + DIF E+P  ++   L+ T
Sbjct:    7 PLTAVKVEALVVMKIIKHCSQTFPTTATGSIVGMDAEGTLEITNSFPFPVVEMPAESHFDNTAPNPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQYFYQKEMNERTVALVHDVSRSAQGSLSLRAFRLSPKFMAAFKENKFTAEELQKSGLRYQDIFVELPVEIHNSHLITT 200          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_RAT (Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus GN=Eif3h PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.342e-35
Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++ + D   YQ+EMMR LR VN+D+  VGWYQST  G F T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++  +FEE+P  +    L+
Sbjct:   39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEHMFEEVPIVIKNSHLI 211          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_BOVIN (Eukaryotic translation initiation factor 3 subunit H OS=Bos taurus GN=EIF3H PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.365e-35
Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++ + D   YQ+EMMR LR VN+D+  VGWYQST  G F T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++  +FEE+P  +    L+
Sbjct:   39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKGNITFEHMFEEVPIVIKNSHLI 211          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EI3HA_DANRE (Eukaryotic translation initiation factor 3 subunit H-A OS=Danio rerio GN=eif3ha PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.365e-35
Identity = 76/178 (42.70%), Postives = 115/178 (64.61%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            P+  +Q++GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  ++++E D   YQ+EMMR LR VN+D+  VGWYQST  G F +  L+++  +YQ  I   V +IYDP ++ QG+L  KA +L+   M++ +  +FT E L++  +++  +FEE+P  +    L+
Sbjct:   18 PVKQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDVEFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVSRALLDSQFSYQHAIEESVVLIYDPLKTAQGSLCLKAYRLTPKLMEICKEKDFTPEGLKKAAVAYEHMFEEVPIFIKNSHLI 194          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_HUMAN (Eukaryotic translation initiation factor 3 subunit H OS=Homo sapiens GN=EIF3H PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.701e-35
Identity = 77/174 (44.25%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   91 VQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++ + D   YQ+EMMR LR VN+D+  VGWYQST  G F T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++  +FEE+P  +    L+
Sbjct:   39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYMFEEVPIVIKNSHLI 211          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EI3HB_DANRE (Eukaryotic translation initiation factor 3 subunit H-B OS=Danio rerio GN=eif3hb PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.701e-35
Identity = 75/178 (42.13%), Postives = 115/178 (64.61%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLL 606
            P+  +QIEGLV++KIIKH +E      +V G LLGL V   LE+TNCFPFP Q  +++ + D   YQ+EMMR LR VN+D+  VGWYQST+ G F +  L+++  +YQ  I   V +IYDP ++ QG+L  KA +L+   M++ +  +F+ E L++ ++ +  +FEE+P  +    L+
Sbjct:   16 PVKQIQIEGLVVMKIIKHYQEEGQGSEVVQGVLLGLVVEDQLEITNCFPFP-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTLYGSFVSRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLCLKAYRLTPKLMEICKEKDFSSEGLKKASVGYEHMFEEVPIVIKNSHLI 192          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPOR (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus oryzae GN=AO090038000435 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.445e-35
Identity = 78/194 (40.21%), Postives = 112/194 (57.73%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADGA---------------NYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWT 612
            PL  V+++ LV++KIIKH  +  P   TG ++G+DV   LE+TN FPFP+ E   +   D A                YQ EM+R LREVNVD N VGWY S  +G F    +IE    YQ+ +  R V +++D SRS QG+L+ +A +LS  FM  ++ N FT E+L++ +L   DIF E+P  ++   L+ T
Sbjct:    7 PLTAVKVDALVVMKIIKHSSQSFPTTATGSIVGMDVDGTLEITNSFPFPVVEMPADSHFDNAAPNPAAAAPRAKANVAYQAEMIRMLREVNVDANNVGWYTSANMGNFVNMNVIENQFFYQKEMNERTVALVHDVSRSAQGSLSLRAFRLSSKFMTAFKENKFTSEELQKSSLRHQDIFVELPVEIHNSHLITT 200          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_ASPNC (Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g01790 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.445e-35
Identity = 80/198 (40.40%), Postives = 115/198 (58.08%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEAD---------------GANYQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENI-RRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWTKFIN 624
            PL  V++E LV++KIIKH  +  P   TG ++G+DV   LE+TN FPFP+ E   E   D                A Y+ EM+R +REVNVD N VGWY S  +G F    +IE    YQ+ +  R V +++D SRS QG+L+ +A +LS  FM  ++ N FT E+L++ NL + DI  E+P  ++   L+ T FI+
Sbjct:    7 PLTAVKVEALVVMKIIKHGSQAFPTTATGSIVGMDVDGTLEITNSFPFPVVEVPAESHFDNTAPNPAAAAPRAKANAAYEAEMVRMMREVNVDANNVGWYTSANMGNFINMNVIENQFFYQKEMNERTVALVHDVSRSAQGSLSLRAFRLSPKFMAAFKENKFTSEELQKSNLRYQDILVELPVEIHNSHLI-TSFIH 203          
BLAST of EY659569 vs. ExPASy Swiss-Prot
Match: EIF3H_NEUCR (Eukaryotic translation initiation factor 3 subunit H OS=Neurospora crassa GN=NCU07929 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.270e-34
Identity = 81/196 (41.33%), Postives = 114/196 (58.16%), Query Frame = 1
Query:   79 PLIVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFP---IQEEDEEIEADG---------AN--YQLEMMRCLREVNVDNNTVGWYQSTMLGCFQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPXSLYEPFLLWTKFIN 624
            P+  VQ+E LV++KI+KHC    P + TG ++G+D    +EVTN F FP   +   D   +A           AN  YQ EM+R L+EVNVD N VGWY S  +G F     IE   +YQ+   + V +++D SRS+QGAL+ +A KLS  FM  Y+   FT E LR   L++ DIF E+P +++   LL T F++
Sbjct:    9 PIKSVQVEALVVMKIVKHCSTSFPTVATGSIVGMDNNGAIEVTNSFQFPSVDVSSSDSHSDASSLAAAAPRAKANIVYQNEMIRHLKEVNVDANNVGWYTSATMGNFINMSFIENQYHYQKENEKTVALVHDVSRSSQGALSLRAFKLSPEFMTAYKEAKFTTESLRNSKLTYKDIFVELPVNVHNSHLL-TSFLH 203          
The following BLAST results are available for this feature:
BLAST of EY659569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
EIF3H_CHICK3.948e-3644.25Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_ASPTN8.795e-3641.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_RAT3.342e-3544.25Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_BOVIN4.365e-3544.25Eukaryotic translation initiation factor 3 subunit... [more]
EI3HA_DANRE4.365e-3542.70Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_HUMAN5.701e-3544.25Eukaryotic translation initiation factor 3 subunit... [more]
EI3HB_DANRE5.701e-3542.13Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_ASPOR7.445e-3540.21Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_ASPNC7.445e-3540.40Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_NEUCR1.270e-3441.33Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659569 ID=EY659569; Name=EY659569; organism=Citrus sinensis; type=EST; length=900bp
AGGAGTTTGTTCTTCCAAATGGCAAACACAATGGCTAGGTCTTTTCTACA
AGTTGCAGCTGCGGAGGAGGTTGCGCCGCCTCTCATAGTTGTTCAGATTG
AGGGTCTGGTTATGCTAAAAATAATCAAACACTGCAAGGAGTTTTCACCA
GCTTTGGTGACGGGACAACTTCTTGGGTTAGATGTTGGTAGCGTGCTTGA
AGTTACGAACTGTTTCCCCTTCCCGATCCAGGAAGAGGACGAAGAAATTG
AAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGGTGTCTAAGAGAG
GTTAATGTGGACAATAACACTGTTGGATGGTACCAATCAACAATGCTAGG
ATGTTTTCAAACAGCAGAGTTGATTGAAACTTTTCTGAACTACCAGGAGA
ATATTAGAAGGTGTGTCTGCATAATTTATGACCCTTCAAGGTCCAATCAA
GGTGCCTTAGCTTTTAAGGCTTTAAAGCTTTCTGATTCATTTATGGATCT
TTACCGCAGCAACAATTTTACTGGAGAAAAGTTGAGGGAGAAAAATTTAT
CATGGGTGGATATTTTTGAGGAAATTCCTGNTAGCTTATATGAACCATTT
CTTCTTTGGACAAAATTTATAAATTTATCGTTGTGCCTACATTGTTTGTT
ATTACAGTTTCCTTCTGTATCTGTGTAAAAGCAAAATGACTCTGCGGAGT
TGCTGTAACTATTTATTTGTTTCTTGGGGAGGTAAATCAGTTACATANTA
TCANGGCCCAAGATTTTATTCATGGATTTTNCTTGTGGNTNNGACTGAGT
GCATTGACCTGATAGCTGAAAAAGATATGATTTATAGCCCATAGNTCATG
TTTTTTCTTTTGTCAGACTGAGAGTATTATACTGTAAACCCGGACCNAAA
back to top