EY659568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_DROGR (Spastin OS=Drosophila grimshawi GN=spas PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.667e-16 Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 3 Query: 12 MKNEFMVNRDGLR-T*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEG-IANMADGYSGSDLKNLCVTAAHCPIREI 320 +K EF+V DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D D G +A + +GYSGSDL L AA PIRE+ Sbjct: 626 LKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDVQTRELLLNRLLQKQGSPLDSDALGRLAKITEGYSGSDLTALAKDAALEPIREL 730
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.667e-16 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 12 MKNEFMVNRDGLR-T*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRA 371 +K EF+V DGL D +R++VLAATNRP +LDEA +RR +R+ V+LPD RE ++ +L K+ D + L +A DGYSGSDL L AA PIRE+ N + + L ++ RA Sbjct: 614 LKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIREL--NVEQVKCLDISAMRA 733
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KTNA1_STRPU (Katanin p60 ATPase-containing subunit OS=Strongylocentrotus purpuratus GN=KATNA1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.667e-16 Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 12 MKNEFMVNRDGLR-----T*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILE 326 +K+E ++ DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP+ RE+++R+ L + LA D+DL+ IA DGYSG+D+ N+C A+ +R ++ Sbjct: 354 VKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMRRRIQ 463
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.254e-16 Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 12 MKNEFMVNRDGLR-T*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMA---DGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTN 476 +K EF+V DGL + +R++VLAATNRP +LDEA +RR +R+ V+LP+ RE ++ +L K+ S +D E +A +A DGYSGSDL L AA PIRE+ N + + L ++ +RP+ DF + +++ V+ +S N Sbjct: 609 LKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPEVQTRELLLSRLLQKQ--GSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIREL--NVEQVKCLDISA------------MRPITEKDFHNSLKRIRRSVAPQSLN 751
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.254e-16 Identity = 57/177 (32.20%), Postives = 95/177 (53.67%), Query Frame = 3 Query: 12 MKNEFMVNRDGL----RT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME*TILRRWIEE 530 +K E +V DG+ + V+VLAATN P+D+DEA+ RRL +R+ + LP A R ++++ L + +LA+DV+++ IA +GYSG+D+ N+C A+ +R +E + L ++ P M+DF+ A ++V S+S + DL E +WI E Sbjct: 324 VKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLPKDEMH---------MPTTMEDFETALKKV-----SKSVSAADLEKYE-----KWIAE 481
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREIL-ENEKNDRALALAENRAS 374 +K EF++ DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A + DGYSGSDL L AA PIRE+ E KN A + R S Sbjct: 458 LKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLS 580
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 3 Query: 12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREIL-ENEKNDRALALAENRAS 374 +K EF++ DG+++ +RVLV+ ATNRP +LDEAV+RR +R+ V+LP+ R +++ +L K+ + +L +A M +GYSGSDL L AA PIRE+ E KN A + R S Sbjct: 459 LKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTNGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLS 581
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16 Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASD-VDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDF 425 +K EFM DGL + RV+++ ATNR D+D+A +RRLP+R +V+LP + R KI+ V+L +L D DL+ IA+ G+SGSDLK LC AA +E ++ ++ + + SS+ +RPL DF Sbjct: 212 LKAEFMTLWDGLL--NNGRVMIIGATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIKQKRQ----LIDSGTIDVNDTSSLKIRPLKTKDF 344
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.067e-15 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 3 Query: 12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIR-VILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI 320 +K E +V DG RT ERVLV+ ATNRP DLD+A +RRL +R+ V LP+ R +II+ +++ + + + +A + GYSG DL LC AA+ PIR + Sbjct: 503 LKTEILVQFDGARTNGDERVLVMGATNRPEDLDDAALRRLVKRIYVGLPELETRLQIIQHLLVGQRHSLTKQQINSLAEVTQGYSGFDLAALCKDAAYEPIRRL 606
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_CHICK (Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.067e-15 Identity = 44/104 (42.31%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI 320 +K EF++ DG+++ ++R+LV+ ATNRP +LD+AV+RR +R+ V+LP+ R +++ +L+K+ + +L +A M DGYSGSDL L AA PIRE+ Sbjct: 458 LKTEFLIEFDGVQSSGEDRILVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGYSGSDLTALVKDAALGPIREL 561 The following BLAST results are available for this feature:
BLAST of EY659568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659568 ID=EY659568; Name=EY659568; organism=Citrus sinensis; type=EST; length=938bpback to top |