EY659568

Overview
NameEY659568
Unique NameEY659568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.393e-15
Identity = 59/159 (37.11%), Postives = 90/159 (56.60%), Query Frame = 3
Query:   12 MKNEFMVNRDGLR-T*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMA---DGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTN 476
            +K EF+V  DGL    + +R++VLAATNRP +LDEA +RR  +R+ V+LP    RE ++  +L K+   S +D E +A +A   DGYSGSDL  L   AA  PIRE+  N +  + L ++             +RP+   DF  + +++   V+ +S N
Sbjct:  613 LKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPGVQTRELLLSRLLQKQ--GSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIREL--NVEQVKCLDISA------------MRPITEKDFHNSLKRIRRSVAPQSLN 755          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.820e-15
Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 3
Query:   12 MKNEFMVNRDGLR-T*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVD-LEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRA 371
            +K EF+V  DGL    D +R++VLAATNRP +LDEA +RR  +R+ V+LPD   RE ++  +L K+    D + L  +A + DGYSGSDL      AA  PIRE+  N +  + L ++  RA
Sbjct:  602 LKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTARPKDAALEPIREL--NVEQVKCLDISAMRA 721          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.820e-15
Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSS 464
            +K+E +V  DG    L   D  + V+VLAATN P+D+DEA+ RRL +R+ + LP A  R +++++ L + EL  D+ LE IA   +GYSG+D+ N+C  A+   +R  +     +   AL++              P+   DF+ A +++   VS+
Sbjct:  328 VKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIRLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQ---------MPVTRGDFELALKKIAKSVSA 474          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_OTOGA (Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur garnettii GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.820e-15
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSS 464
            +K+E ++  DG    L   D  + V+VLAATN P+D+DEA+ RRL +R+ + LP A  R +++++ L + EL  D+ LE IA   +GYSG+D+ N+C  A+   +R  +     +   AL++              P+   DF+ A +++   VS+
Sbjct:  328 VKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQ---------MPVTKGDFELALKKIAKSVSA 474          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_HUMAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Homo sapiens GN=KATNAL1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.820e-15
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSS 464
            +K+E ++  DG    L   D  + V+VLAATN P+D+DEA+ RRL +R+ + LP A  R +++++ L + EL  D+ LE IA   +GYSG+D+ N+C  A+   +R  +     +   AL++              P+   DF+ A +++   VS+
Sbjct:  328 VKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQ---------MPVTKGDFELALKKIAKSVSA 474          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_NEMVE (Spastin OS=Nematostella vectensis GN=v1g144095 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.104e-15
Identity = 48/136 (35.29%), Postives = 79/136 (58.09%), Query Frame = 3
Query:   12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK-EELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVD-VRPLI 413
            +K EF+V+ DG+    +ER+LV+ ATNRP +LD+A +RR+ +R+ + LPD   R+ ++  +LAK     S  +++ +A M + YSGSDL  L   AA  PIR++  ++    A     N       +S+  +RP +
Sbjct:  443 LKTEFLVSFDGVVADPEERILVMGATNRPQELDDAALRRMVKRIHIPLPDKETRKVLLTKLLAKHHNPLSGAEIDRLARMTEHYSGSDLTALARDAALGPIRDLNSDQLKSMAANEVRNITFQDFVNSLQIIRPSV 578          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.104e-15
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSS 464
            +K+E ++  DG    L   D  + V+VLAATN P+D+DEA+ RRL +R+ + LP A  R +++++ L + EL  D+ LE IA   +GYSG+D+ N+C  A+   +R  +     +   AL++              P+   DF+ A +++   VS+
Sbjct:  328 VKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLGPEEIRALSKEELQ---------MPVTKGDFELALKKIAKSVSA 474          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_MOUSE (Katanin p60 ATPase-containing subunit A-like 1 OS=Mus musculus GN=Katnal1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.104e-15
Identity = 51/156 (32.69%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSS 464
            +K+E ++  DG    L   D  + V+VLAATN P+D+DEA+ RRL +R+ + LP A  R +++++ L + EL  DV LE IA+  +GYSG+D+ N+C  A+   +R  +     +   AL++              P+   D + A +++   VS+
Sbjct:  326 VKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEELQ---------MPVTRGDLELALKKIAKSVSA 472          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.054e-15
Identity = 45/129 (34.88%), Postives = 79/129 (61.24%), Query Frame = 3
Query:   12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSV 395
            +K EF++  DG+++   +RVLV+ ATNRP +LD+AV+RR  +R+ V+LP+   R  +++ +L+K+    ++ +L  ++ + +GYSGSD+  L   AA  PIRE+   +  + A +   N       SS+
Sbjct:  448 LKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRNIKYSDFLSSL 576          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500
            N+ +   DG+ T  K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I++  L K  +A DVDL+ +A M +G+SG+DL  +C  A    IRE +ENE + +R     E + +PS     +  P  + + +  H +     +  S + ND+   E
Sbjct:  602 NQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRER-----ERQTNPSAMEVEEDDP--VPEIRRDHFEEAMRFARRSVSDNDIRKYE 756          

HSP 2 Score: 70.0922 bits (170), Expect = 2.082e-11
Identity = 47/144 (32.64%), Postives = 79/144 (54.86%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443
            ++ +   DGL+   +  V+V+AATNRP  +D A+ R  R  R + + +PD+  R +I+++     +L+ DVDLE +AN   G+ G+DL  LC  AA   IR+ ++       + L +      + +S+ V    MDDF++A  Q
Sbjct:  326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458          
The following BLAST results are available for this feature:
BLAST of EY659568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
SPAST_DROVI1.393e-1537.11Spastin OS=Drosophila virilis GN=spas PE=3 SV=1[more]
SPAST_DROSI1.820e-1543.44Spastin OS=Drosophila simulans GN=spas PE=3 SV=1[more]
KATL1_RABIT1.820e-1533.33Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_OTOGA1.820e-1532.69Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_HUMAN1.820e-1532.69Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
SPAST_NEMVE3.104e-1535.29Spastin OS=Nematostella vectensis GN=v1g144095 PE=... [more]
KATL1_PAPAN3.104e-1532.69Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
KATL1_MOUSE3.104e-1532.69Katanin p60 ATPase-containing subunit A-like 1 OS=... [more]
SPAST_XENTR4.054e-1534.88Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1[more]
TERA_XENTR5.295e-1532.32Transitional endoplasmic reticulum ATPase OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659568 ID=EY659568; Name=EY659568; organism=Citrus sinensis; type=EST; length=938bp
CTATGCTTTTTATGAAGAATGAATTCATGGTTAACCGGGATGGTTTGCGC
ACATAAGATAAAGAACGAGTTCTGGTACTTGCTGCTACCAATAGGCCTTT
TGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCAAGGAGATTGATGGTTA
ACTTGCCAGATGCCCCAAACAGAGAAAAGATTATAAGAGTTATCTTGGCC
AAAGAAGAATTGGCATCTGATGTGGATTTGGAAGGAATTGCAAACATGGC
TGATGGGTACTCTGGAAGTGATCTAAAGAACCTGTGTGTGACTGCCGCAC
ATTGTCCCATACGGGAAATTTTGGAGAATGAAAAGAACGACAGAGCTTTA
GCATTGGCCGAGAATAGAGCTTCACCTTCATTGTACAGCAGCGTCGACGT
TCGCCCTCTGATTATGGACGATTTCAAATATGCACATGAGCAGGTGTGTG
CAATTGTATCATCAGAGTCTACAAATATGAATGATCTCCCTTCAATGGAA
TGAACTATACTGAGAAGGTGGATCGAAGAAAAAGAAATCTCTGAGCTACT
TTATGCAAAGGGGGATTCTTTTTGAATACCATTCTTGGGTGGGTCATTCC
CCTCTTCATCCTATATGGTGCCAAGATCACGGACCTGTATTTATGGAAAA
TTCTGGAGGGCCGTCCCCTTTTACTTGGAAAAATATACGCTTTTGAACCT
CTTCCCCTTTGGTTAGAAATTCTTTTGTTATATTCTTAACAAGGGTAACT
TAACTCAAATAGGCATTTCCCCTTCCATAAACCGCGACTTTGTTTTTTTG
GCCCTCCAGATGCGTAATAACATTGTGTTAAATCTTGCGAAATATAAGAA
AACAATAATAAACAGGGCCGCCGCTCAGAGGATCAACGTTCCCNACCGGC
TAGCCACGCTTTCTCTTCTTTGTGCCCCCAAATTCATC
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