EY659568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15 Identity = 44/119 (36.97%), Postives = 75/119 (63.03%), Query Frame = 3 Query: 12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAEN 365 +K EF++ DG+++ +RVLV+ ATNRP +LD+AV+RR +R+ V LP+ R +++ +L+K+ S+ +L ++ + +GYSGSD+ L AA PIRE+ + + A + N Sbjct: 445 LKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLRRFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRN 563
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_RAT (Katanin p60 ATPase-containing subunit A-like 1 OS=Rattus norvegicus GN=Katnal1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15 Identity = 50/156 (32.05%), Postives = 85/156 (54.49%), Query Frame = 3 Query: 12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSS 464 +K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R +++++ L + EL D+ LE IA +GYSG+D+ N+C A+ +R + + AL++ P+ D + A +++ VS+ Sbjct: 326 VKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEIRALSKEELQ---------MPVTRGDLELALKKIAKSVSA 472
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500 N+ + DG+ T K+ V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A IRE +E+E + +R E + +PS + P + + + H + + S + ND+ E Sbjct: 602 NQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER-----ERQTNPSAMEVEEDDP--VPEIRRDHFEEAMRFARRSVSDNDIRKYE 756 HSP 2 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443 ++ + DGL+ + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA IR+ ++ + L + + +S+ V MDDF++A Q Sbjct: 326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500 N+ + DG+ T K+ V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A IRE +E+E + +R E + +PS + P + + + H + + S + ND+ E Sbjct: 602 NQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER-----ERQTNPSAMEVEEDDP--VPEIRRDHFEEAMRFARRSVSDNDIRKYE 756 HSP 2 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443 ++ + DGL+ + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA IR+ ++ + L + + +S+ V MDDF++A Q Sbjct: 326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500 N+ + DG+ T K+ V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A IRE +E+E + +R E + +PS + P + + + H + + S + ND+ E Sbjct: 602 NQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER-----ERQTNPSAMEVEEDDP--VPEIRRDHFEEAMRFARRSVSDNDIRKYE 756 HSP 2 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443 ++ + DGL+ + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA IR+ ++ + L + + +S+ V MDDF++A Q Sbjct: 326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500 N+ + DG+ T K+ V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A IRE +E+E + +R E + +PS + P + + + H + + S + ND+ E Sbjct: 602 NQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER-----ERQTNPSAMEVEEDDP--VPEIRRDHFEEAMRFARRSVSDNDIRKYE 756 HSP 2 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443 ++ + DGL+ + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA IR+ ++ + L + + +S+ V MDDF++A Q Sbjct: 326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 53/164 (32.32%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500 N+ + DG+ T K+ V ++ ATNRP +D A++R RL + + + LPD +R I++ L K +A DVDLE +A M +G+SG+DL +C A IRE +E+E + +R E + +PS + P + + + H + + S + ND+ E Sbjct: 602 NQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRER-----ERQTNPSAMEVEEDDP--VPEIRRDHFEEAMRFARRSVSDNDIRKYE 756 HSP 2 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443 ++ + DGL+ + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA IR+ ++ + L + + +S+ V MDDF++A Q Sbjct: 326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL1_SORAR (Katanin p60 ATPase-containing subunit A-like 1 OS=Sorex araneus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.915e-15 Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 12 MKNEFMVNRDG----LRT*DKER-VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVS 461 +K+E ++ DG L D + V+VLAATN P+D+DEA+ RRL +R+ + LP A R ++++ L + EL D+ LE IA +GYSG+D+ N+C A+ +R + + AL++ P+ DF A +++ VS Sbjct: 328 VKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRTDLLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQ---------MPVTKGDFDLALKKIAKSVS 473
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.628e-14 Identity = 51/164 (31.10%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500 N+ + DG+ + K+ V ++ ATNRP +D A++R RL + + + LPD +R I++ L K ++ DVDL+ +A M +G+SG+DL +C A IRE +ENE + +R E + +PS + P + + + H + + S + ND+ E Sbjct: 602 NQILTEMDGMSS--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRER-----ERQTNPSAMEVEEDDP--VPEIRKDHFEEAMRFARRSVSDNDIRKYE 756 HSP 2 Score: 72.4034 bits (176), Expect = 4.195e-12 Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443 ++ + DGL+ + V+V+AATNRP +D A+ R R R + + +PDA R +I+++ +LA DVDLE +AN G+ G+DL LC AA IR+ ++ + L + + +S+ V MDDF++A Q Sbjct: 326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.854e-14 Identity = 57/164 (34.76%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQV-CAIVSSESTNMNDLPSME 500 N+ + DGL + E V+V+AATNRP +D A++R R R + V P RE+I+++ LA+DV L +A ADGY GSDL N+ AA E L ++++ + +A RA+ +VRP I DD ++QV S+ N+N E Sbjct: 585 NQLLTELDGLE--EMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAA----IEALRDDEDADDVGMAHFRAAME-----NVRPTITDDLMEYYDQVEDQFKGSQGPNVNSRQGSE 737 The following BLAST results are available for this feature:
BLAST of EY659568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659568 ID=EY659568; Name=EY659568; organism=Citrus sinensis; type=EST; length=938bpback to top |