EY659568

Overview
NameEY659568
Unique NameEY659568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.646e-14
Identity = 41/107 (38.32%), Postives = 65/107 (60.75%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I++  L K  +A DVD++ +A M +G+SG+DL  +C  A    IRE +ENE
Sbjct:  602 NQILTEMDGMSI--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENE 706          

HSP 2 Score: 70.0922 bits (170), Expect = 2.082e-11
Identity = 47/144 (32.64%), Postives = 79/144 (54.86%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQ 443
            ++ +   DGL+   +  V+V+AATNRP  +D A+ R  R  R + + +PD+  R +I+++     +L+ DVDLE +AN   G+ G+DL  LC  AA   IR+ ++       + L +      + +S+ V    MDDF++A  Q
Sbjct:  326 SQLLTLMDGLK--QRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD------LIDLEDETIDAEVMNSLAV---TMDDFRWALSQ 458          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: MSP1_CAEEL (Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.646e-14
Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = 3
Query:   12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLC 287
            MK +FM   DG  +   ++++V+ ATNRP D+D A++RR+  R  V +P+A  R +I+ VIL  E++ + V+L  IA  A+G SGSDLK +C
Sbjct:  203 MKAQFMTLWDGFSS-SGDQIIVMGATNRPRDVDAAILRRMTARFQVPVPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 55/163 (33.74%), Postives = 82/163 (50.31%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVCAIVSSESTNMNDLPSME 500
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +RE I++  L K  LA +VDL  IA +  G+SG+DL  +C  A    IR+ +E E   R    AEN+ S       D  P I      AH +     +  S + ND+   E
Sbjct:  599 NQILTEMDGMGA--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIR-REKERAENQNSAMDMDEDDPVPEITS----AHFEEAMKFARRSVSDNDIRKYE 754          

HSP 2 Score: 68.9366 bits (167), Expect = 4.638e-11
Identity = 53/186 (28.49%), Postives = 95/186 (51.08%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVC------AIVSSESTNMNDLPSME*TILRRWIEEKEISELL 551
            ++ +   DG++      ++V+AATNRP  +D A+ R  R  R + + +PDA  R +++R+     +L  DVDLE IA  + G+ G+DL +LC  AA   IRE ++       + L +++    + +S+ V    M++F+YA  +         +V   +T   D+  +E         +KE+ EL+
Sbjct:  323 SQLLTLMDGMKK--SSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMD------LIDLEDDKIDAEVLASLAV---TMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLE-------SVKKELQELV 490          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL2_XENTR (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus tropicalis GN=katnal2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.985e-14
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 3
Query:   12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL------AKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKN 338
            MK E +V  DGL   D + V VLAA+N P++LD A++RRL +R++V+LP    R+ +I+  L      +  EL +D+D   +    DGYSGSD++ +C  AA  P+R+I +  +N
Sbjct:  380 MKTELLVQMDGLARSD-DLVFVLAASNLPWELDYAMLRRLEKRILVDLPSKEARQAMIQHWLPPVSNSSGVELRTDLDYSTLGAETDGYSGSDIRLVCKEAAMRPVRKIFDALEN 493          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.905e-13
Identity = 44/130 (33.85%), Postives = 71/130 (54.62%), Query Frame = 3
Query:   12 MKNEFMVNRDGLRT*-DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVD 398
            +K+EF+V  DG +   D  RV VLAATN P++LDEA+ RR  +R+ + LPD   R+K+I   +     + +++ + +A   +G+SG+D+ +LC TAA   +R           L  A       L  ++D
Sbjct:  313 VKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKAELVRNID 442          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.794e-13
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVC------AIVSSESTNMNDLPSME 500
            ++ +   DGL+T  +  V+V+AATNRP  +D A+ R  R  R + + +PDA  R +I+R+     +L  DVDLE +AN   G+ G+DL +LC  AA   IRE +E       + L ++     + +S+ V    M++F++A  +        A+V + +T  +D+  ++
Sbjct:  331 SQLLTLMDGLKT--RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME------LIDLEDDTIDAEVLNSLAV---TMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQ 488          

HSP 2 Score: 71.633 bits (174), Expect = 7.156e-12
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+    K+ V ++ ATNRP  +D AV+R  RL + + + LPD  +R +I +  L K  L++D+DL  +A    G+SG+DL  +C  A    IRE +E E
Sbjct:  607 NQVLTEMDGMNA--KKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIERE 711          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.472e-13
Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYAHEQVC------AIVSSESTNMNDLPSME 500
            ++ +   DG++   +  ++V+AATNRP  +D A+ R  R  R + + +PDA  R +I+R+     +LA DVDLE IAN   G+ G+DL +LC  AA   IRE +E       + L +++    + +S+ V    M++F++A  +        A+V + +T  +D+  ++
Sbjct:  332 SQLLTLMDGVK--GRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKME------LIDLEDDQIDAEVLNSLAV---TMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQ 489          

HSP 2 Score: 72.7886 bits (177), Expect = 3.212e-12
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+    K+ V ++ ATNRP  +D AV+R  RL + + + LPD  +R +I++  L K  L+ D+DL  +A    G+SG+DL  +C  A    IRE +E E
Sbjct:  609 NQVLTEMDGMNA--KKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 51/141 (36.17%), Postives = 77/141 (54.61%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYA 434
            ++ +   DG++   +  V+V+AATNRP  +D A+ R  R  R + V +PD   R +I+R+     +LA DVDLE IA    GY GSDL +LC  AA   IRE ++       + L E+     +  S+ V    MD+F++A
Sbjct:  346 SQLLTLMDGMKA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMD------MIDLDEDEIDAEVLDSLGV---TMDNFRFA 475          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 38/104 (36.54%), Postives = 64/104 (61.54%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREIL 323
            N+ +   DG+   +K+ + ++AATNRP  LD+A+ R  RL + + ++LPD  +R  I + IL    L  DVD+  +A   +G+SG+D+ NLC +A +  I+E +
Sbjct: 1057 NQILTEIDGIN--EKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETI 1158          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.442e-12
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 3
Query:   12 MKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            M N+ +   DG+    K+ V V+ ATNRP  LD A++R  RL + + + LPD  +R  I++  L K  L+ ++DL  +A   D +SG+DL  +C  A    IRE +E E
Sbjct:  603 MLNQLLSEMDGIN--QKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYE 709          
The following BLAST results are available for this feature:
BLAST of EY659568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
TERA_XENLA7.646e-1438.32Transitional endoplasmic reticulum ATPase OS=Xenop... [more]
MSP1_CAEEL7.646e-1443.48Mitochondrial sorting homolog OS=Caenorhabditis el... [more]
TERA_DROME9.985e-1433.74Transitional endoplasmic reticulum ATPase TER94 OS... [more]
KATL2_XENTR9.985e-1440.00Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
MEI1_CAEEL2.905e-1333.85Meiotic spindle formation protein mei-1 OS=Caenorh... [more]
TERA2_CAEEL3.794e-1331.36Transitional endoplasmic reticulum ATPase homolog ... [more]
TERA1_CAEEL6.472e-1330.77Transitional endoplasmic reticulum ATPase homolog ... [more]
CDC48_SCHPO1.104e-1236.17Cell division cycle protein 48 OS=Schizosaccharomy... [more]
CDAT_PLAF71.104e-1236.54Putative cell division cycle ATPase OS=Plasmodium ... [more]
CDC48_ENCCU1.442e-1237.61Cell division control protein 48 OS=Encephalitozoo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659568 ID=EY659568; Name=EY659568; organism=Citrus sinensis; type=EST; length=938bp
CTATGCTTTTTATGAAGAATGAATTCATGGTTAACCGGGATGGTTTGCGC
ACATAAGATAAAGAACGAGTTCTGGTACTTGCTGCTACCAATAGGCCTTT
TGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCAAGGAGATTGATGGTTA
ACTTGCCAGATGCCCCAAACAGAGAAAAGATTATAAGAGTTATCTTGGCC
AAAGAAGAATTGGCATCTGATGTGGATTTGGAAGGAATTGCAAACATGGC
TGATGGGTACTCTGGAAGTGATCTAAAGAACCTGTGTGTGACTGCCGCAC
ATTGTCCCATACGGGAAATTTTGGAGAATGAAAAGAACGACAGAGCTTTA
GCATTGGCCGAGAATAGAGCTTCACCTTCATTGTACAGCAGCGTCGACGT
TCGCCCTCTGATTATGGACGATTTCAAATATGCACATGAGCAGGTGTGTG
CAATTGTATCATCAGAGTCTACAAATATGAATGATCTCCCTTCAATGGAA
TGAACTATACTGAGAAGGTGGATCGAAGAAAAAGAAATCTCTGAGCTACT
TTATGCAAAGGGGGATTCTTTTTGAATACCATTCTTGGGTGGGTCATTCC
CCTCTTCATCCTATATGGTGCCAAGATCACGGACCTGTATTTATGGAAAA
TTCTGGAGGGCCGTCCCCTTTTACTTGGAAAAATATACGCTTTTGAACCT
CTTCCCCTTTGGTTAGAAATTCTTTTGTTATATTCTTAACAAGGGTAACT
TAACTCAAATAGGCATTTCCCCTTCCATAAACCGCGACTTTGTTTTTTTG
GCCCTCCAGATGCGTAATAACATTGTGTTAAATCTTGCGAAATATAAGAA
AACAATAATAAACAGGGCCGCCGCTCAGAGGATCAACGTTCCCNACCGGC
TAGCCACGCTTTCTCTTCTTTGTGCCCCCAAATTCATC
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