EY659568

Overview
NameEY659568
Unique NameEY659568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.883e-12
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      + V+V+AATNRP  LD A+ R  R  R+++V LPD   RE+I++V + K  +A DVD   +A    GYSG+DL NL   AA      +     N R + + E  +A   +    + R +IM D
Sbjct:   21 NQMLVEMDGFS--GNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA------LFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTD 150          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.883e-12
Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      + V+V+AATNRP  LD A+ R  R  R+++V LPD   RE+I++V + K  +A DVD   +A    GYSG+DL NL   AA      +     N R + + E  +A   +    + R +IM D
Sbjct:  275 NQMLVEMDGFS--GNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA------LFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTD 404          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.883e-12
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYA 434
            ++ +   DG++   +  V+V+AATNRP  +D A+ R  R  R + + +PDA  R +++R+     +LA DVDLE +A    GY G+D+ +LC  AA   IRE ++       + L E+     +  S+ V    MD+F++A
Sbjct:  336 SQLLTLMDGMKA--RSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMD------LIDLDEDEIDAEVLDSLGV---TMDNFRFA 465          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.459e-12
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      E ++V+AATNRP  LD A++R  R  R+++V LPD   RE+I++V + +  LA+D+D   IA    G+SG+DL NL   AA      +     N R +++ E  +A   +    + R ++M +
Sbjct:  276 NQMLVEMDGFE--GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA------LFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTE 405          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.459e-12
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      E ++V+AATNRP  LD A++R  R  R+++V LPD   RE+I++V + +  LA+D+D   IA    G+SG+DL NL   AA      +     N R +++ E  +A   +    + R ++M +
Sbjct:  276 NQMLVEMDGFE--GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA------LFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTE 405          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDC48_CAPAN (Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.212e-12
Identity = 49/150 (32.67%), Postives = 76/150 (50.67%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIM-----DDFKYAHEQV 446
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R +I +  L K  L+ D+DL  +A    G+SG+D+  +C  A    IRE +E +  +R     EN    S+   VD  P I      +  KYA   V
Sbjct:  606 NQLLTEMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKD-IEREKRRQEN--PDSMDEDVDEVPEIKPAHFEESMKYARRSV 750          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 3
Query:    6 LFMKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE------ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI---LENEKND 341
            L MK E +V  DGL    ++ V VLAA+N P++LD A++RRL +R++V+LP    R+ +I   L         EL ++++   ++   +GYSGSD+K +C  AA  P+R+I   LEN +++
Sbjct:  374 LRMKTELLVQMDGLAR-SEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFDALENHQSE 493          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      E ++V+AATNRP  LD A++R  R  R+++V LPD   RE+I++V + +  LA D+D   IA    G+SG+DL NL   AA      +     N R +++ E  +A   +    + R ++M +
Sbjct:  276 NQMLVEMDGFE--GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA------LFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTE 405          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      E ++V+AATNRP  LD A++R  R  R+++V LPD   RE+I++V + +  LA D+D   IA    G+SG+DL NL   AA      +     N R +++ E  +A   +    + R ++M +
Sbjct:  276 NQMLVEMDGFE--GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA------LFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTE 405          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.195e-12
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDD 422
            N+ +V  DG      E ++V+AATNRP  LD A++R  R  R+++V LPD   RE+I++V + +  LA D+D   IA    G+SG+DL NL   AA      +     N R +++ E  +A   +    + R ++M +
Sbjct:  276 NQMLVEMDGFE--GNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA------LFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTE 405          
The following BLAST results are available for this feature:
BLAST of EY659568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FTSH2_HAEIN1.883e-1236.23Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN1.883e-1236.23Cell division protease ftsH homolog 1 OS=Haemophil... [more]
CDC48_YEAST1.883e-1233.33Cell division control protein 48 OS=Saccharomyces ... [more]
FTSH_SALTY2.459e-1234.06Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI2.459e-1234.06Cell division protease ftsH OS=Salmonella typhi GN... [more]
CDC48_CAPAN3.212e-1232.67Cell division cycle protein 48 homolog OS=Capsicum... [more]
KATL2_HUMAN4.195e-1238.02Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
FTSH_SHIFL4.195e-1234.06Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_ECOLI4.195e-1234.06Cell division protease ftsH OS=Escherichia coli (s... [more]
FTSH_ECO574.195e-1234.06Cell division protease ftsH OS=Escherichia coli O1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659568 ID=EY659568; Name=EY659568; organism=Citrus sinensis; type=EST; length=938bp
CTATGCTTTTTATGAAGAATGAATTCATGGTTAACCGGGATGGTTTGCGC
ACATAAGATAAAGAACGAGTTCTGGTACTTGCTGCTACCAATAGGCCTTT
TGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCAAGGAGATTGATGGTTA
ACTTGCCAGATGCCCCAAACAGAGAAAAGATTATAAGAGTTATCTTGGCC
AAAGAAGAATTGGCATCTGATGTGGATTTGGAAGGAATTGCAAACATGGC
TGATGGGTACTCTGGAAGTGATCTAAAGAACCTGTGTGTGACTGCCGCAC
ATTGTCCCATACGGGAAATTTTGGAGAATGAAAAGAACGACAGAGCTTTA
GCATTGGCCGAGAATAGAGCTTCACCTTCATTGTACAGCAGCGTCGACGT
TCGCCCTCTGATTATGGACGATTTCAAATATGCACATGAGCAGGTGTGTG
CAATTGTATCATCAGAGTCTACAAATATGAATGATCTCCCTTCAATGGAA
TGAACTATACTGAGAAGGTGGATCGAAGAAAAAGAAATCTCTGAGCTACT
TTATGCAAAGGGGGATTCTTTTTGAATACCATTCTTGGGTGGGTCATTCC
CCTCTTCATCCTATATGGTGCCAAGATCACGGACCTGTATTTATGGAAAA
TTCTGGAGGGCCGTCCCCTTTTACTTGGAAAAATATACGCTTTTGAACCT
CTTCCCCTTTGGTTAGAAATTCTTTTGTTATATTCTTAACAAGGGTAACT
TAACTCAAATAGGCATTTCCCCTTCCATAAACCGCGACTTTGTTTTTTTG
GCCCTCCAGATGCGTAATAACATTGTGTTAAATCTTGCGAAATATAAGAA
AACAATAATAAACAGGGCCGCCGCTCAGAGGATCAACGTTCCCNACCGGC
TAGCCACGCTTTCTCTTCTTTGTGCCCCCAAATTCATC
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