EY659568

Overview
NameEY659568
Unique NameEY659568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILE-------NEKNDRALA 353
            N+ +V  DG +  D   V+V+AATNR   LD A++R  R  R+++V  PD   RE +++V    + LASDVDL  +A    GY G+DL+N+   AA    R+  +       +E  DRA+A
Sbjct:  317 NQLLVEMDGFQD-DGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMA 436          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.479e-12
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+ +  K+ V V+ ATNRP  LD A+VR  RL   + V LPD  +RE I++  L K  +ASDVD+E IA+   G+SG+DL  +   A    I+E +  E
Sbjct:  628 NQLLTEMDGMTS--KKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESISAE 732          

HSP 2 Score: 69.707 bits (169), Expect = 2.719e-11
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAENRASPSLYSSVDVRPLIMDDFKYA 434
            ++ +   DG++   +  V+V+AATNRP  +D A+ R  R  R + + +PD   R +I+ +     +L  DVDLE IA    GY GSDL +LC  AA   IRE ++       + L E+     +  S+ V    M++F+YA
Sbjct:  351 SQLLTLMDGMKA--RSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMD------LIDLDEDTIDAEVLDSLGV---TMENFRYA 480          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: KATL2_MOUSE (Katanin p60 ATPase-containing subunit A-like 2 OS=Mus musculus GN=Katnal2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.156e-12
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 3
Query:    6 LFMKNEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE------ELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI---LENEKND 341
            L MK E +V  DGL    ++ V VLAA+N P++LD A++RRL +R++V+LP    R+ +I   L         EL + ++   ++   +GYSGSD+K +C  AA  P+R+I   LEN +++
Sbjct:  375 LRMKTELLVQMDGLAR-SEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSQEARQAMIYHWLPPVSKNHALELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFSVLENNQSE 494          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.156e-12
Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDDFK 428
            N+ +V  DG      E ++++AATNRP  LD A++R  R  R+++V LPD   RE+I++V + K  L+ DVD   IA    G+SG+DL NL   AA      +     + R +++ E  RA   +    + R ++M DF+
Sbjct:  276 NQMLVEMDGFD--GNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAA------LFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQ 407          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.346e-12
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE-KNDR 344
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I +  L K  +A DVD+  +A    G+SG+D+  +C  A    IRE +E + +N+R
Sbjct:  605 NQLLTEMDGMNA--KKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENER 714          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.221e-11
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R +I +  L K  +A +VDL  +A    G+SG+D+  +C  A    IRE +E +
Sbjct:  606 NQLLTEMDGMSA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKD 710          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.221e-11
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I +  L K  +A DVD+  +A    G+SG+D+  +C  A    IRE +E +
Sbjct:  606 NQLLTEMDGMNA--KKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKD 710          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.594e-11
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENE 332
            N+ +   DG+    K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R +I +  L K  +A DVDL  +A    G+SG+D+  +C  +    IRE +E +
Sbjct:  606 NQLLTEMDGMNA--KKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKD 710          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.082e-11
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNL----CVTAAHCPIREILENEKND 341
            N+ +   DG        V+VLAATNRP  LD A++R  R  R++ V+ PD   R KI++V    + L  DVD E IA    GY+G+DL+NL     + AA   ++EI ++E +D
Sbjct:  377 NQLLTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISD 488          
BLAST of EY659568 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.082e-11
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:   18 NEFMVNRDGLRT*DKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILENEKNDRALALAE-NRASPSLYSSVDVRPLIMDDFK 428
            N+ +V  DG      E V+++AATNRP  LD A++R  R  R+++V LPD   R++I++V + K  L+ DVD   IA    G+SG+DL NL   AA      +     N+R +++    +A   +    + R ++M DF+
Sbjct:  276 NQMLVEMDGFD--GNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAA------LFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQ 407          
The following BLAST results are available for this feature:
BLAST of EY659568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FTSH_LACLA5.479e-1238.02Cell division protease ftsH homolog OS=Lactococcus... [more]
CDC48_EMENI5.479e-1241.12Cell division control protein 48 OS=Emericella nid... [more]
KATL2_MOUSE7.156e-1238.02Katanin p60 ATPase-containing subunit A-like 2 OS=... [more]
FTSH_BUCAI7.156e-1235.00Cell division protease ftsH OS=Buchnera aphidicola... [more]
CD48E_ARATH9.346e-1234.82Cell division control protein 48 homolog E OS=Arab... [more]
CDC48_SOYBN1.221e-1134.58Cell division cycle protein 48 homolog OS=Glycine ... [more]
CD48A_ARATH1.221e-1134.58Cell division control protein 48 homolog A OS=Arab... [more]
CD48D_ARATH1.594e-1134.58Cell division control protein 48 homolog D OS=Arab... [more]
FTSH_TOBAC2.082e-1139.47Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_BUCAP2.082e-1134.29Cell division protease ftsH OS=Buchnera aphidicola... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659568 ID=EY659568; Name=EY659568; organism=Citrus sinensis; type=EST; length=938bp
CTATGCTTTTTATGAAGAATGAATTCATGGTTAACCGGGATGGTTTGCGC
ACATAAGATAAAGAACGAGTTCTGGTACTTGCTGCTACCAATAGGCCTTT
TGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCAAGGAGATTGATGGTTA
ACTTGCCAGATGCCCCAAACAGAGAAAAGATTATAAGAGTTATCTTGGCC
AAAGAAGAATTGGCATCTGATGTGGATTTGGAAGGAATTGCAAACATGGC
TGATGGGTACTCTGGAAGTGATCTAAAGAACCTGTGTGTGACTGCCGCAC
ATTGTCCCATACGGGAAATTTTGGAGAATGAAAAGAACGACAGAGCTTTA
GCATTGGCCGAGAATAGAGCTTCACCTTCATTGTACAGCAGCGTCGACGT
TCGCCCTCTGATTATGGACGATTTCAAATATGCACATGAGCAGGTGTGTG
CAATTGTATCATCAGAGTCTACAAATATGAATGATCTCCCTTCAATGGAA
TGAACTATACTGAGAAGGTGGATCGAAGAAAAAGAAATCTCTGAGCTACT
TTATGCAAAGGGGGATTCTTTTTGAATACCATTCTTGGGTGGGTCATTCC
CCTCTTCATCCTATATGGTGCCAAGATCACGGACCTGTATTTATGGAAAA
TTCTGGAGGGCCGTCCCCTTTTACTTGGAAAAATATACGCTTTTGAACCT
CTTCCCCTTTGGTTAGAAATTCTTTTGTTATATTCTTAACAAGGGTAACT
TAACTCAAATAGGCATTTCCCCTTCCATAAACCGCGACTTTGTTTTTTTG
GCCCTCCAGATGCGTAATAACATTGTGTTAAATCTTGCGAAATATAAGAA
AACAATAATAAACAGGGCCGCCGCTCAGAGGATCAACGTTCCCNACCGGC
TAGCCACGCTTTCTCTTCTTTGTGCCCCCAAATTCATC
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