EY659560

Overview
NameEY659560
Unique NameEY659560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_WOLPP (Elongation factor Ts OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 71/211 (33.65%), Postives = 112/211 (53.08%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            I++LR++T   + D K AL +CD DI+ A+  LR  G   A KKS R A++GL+A+   ++   ++++NCETDFV+RNE F                VS   S         L+ LK N  +  +G   TVQ AI    +++GE ++L     L  +   +++ Y+H     GLG+I  L++L+     SS D  + +G ++ MH+VA KP
Sbjct:    8 IRELRDRTGLGLSDCKKALEECDGDIKKAVDRLRTIGFAKADKKSDRVASDGLIAMCLAKNYGVLVKVNCETDFVARNEKF-------------IALVSNLASIACQERCTSLDELK-NAKYEDVG---TVQEAIISGTSVLGEKLELSNLCYLE-TKDGIIAGYVH-GDMHGLGKIGALVALQ-----SSGDK-QEIGKQIAMHVVAMKP 193          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_RICTY (Elongation factor Ts OS=Rickettsia typhi GN=tsf PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 68/211 (32.23%), Postives = 105/211 (49.76%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +K+LRE+T A M D K AL++   + E A+  LRK+G   A KK  R A+EGL A+  N   + VIE+N ETDFV+RNE FQ             +N+               + LK++    K+    +V+  I E  A +GEN+ LRR  +L  S+   + +Y+H      LG+I+ L+ LE    +     L  +  ++ +H+    P
Sbjct:   11 VKELREKTGAGMMDCKKALIETSGNFEEAIDFLRKKGLAAAVKKFGRIASEGLTAIKINGLTSVVIEVNSETDFVARNEQFQNLVKDIVNLAIIAQNI---------------DALKIS----KMQSGKSVEEEIIENIATIGENLTLRRMDILEISN-GAIGSYVHNEVVPHLGKISVLVGLE--SNAKDKAKLAALAKQIAVHVAGNNP 199          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_RICPR (Elongation factor Ts OS=Rickettsia prowazekii GN=tsf PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 68/212 (32.08%), Postives = 110/212 (51.89%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K AL++   + E A+  LRK+G   A KKS R A+EGL A+  +   +AVIE+N ETDFV+RN+ FQ             +N+               + LK++    K+    +V+  I +  AI+GEN+ LRR  +L  S+   + +Y+H      LG+I+ L+ LE    +     L+ +  ++ +H+    P
Sbjct:   10 VVKELREKTGAGMMDCKKALIETSGNFEEAIDFLRKKGLAAAVKKSGRIASEGLTAVKVDGLISAVIEVNSETDFVARNKQFQDLVKDIVNLAIIAQNI---------------DTLKIS----KMQSGKSVEEEIIDNIAIIGENLTLRRMDILEISN-GAIGSYVHNEVVPHLGKISVLVGLE--SNAKDKVKLEALAKQIAVHVAGNNP 199          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_PHEZH (Elongation factor Ts OS=Phenylobacterium zucineum (strain HLK1) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 74/209 (35.41%), Postives = 104/209 (49.76%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLA-LAQNESKAAV-IELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHI 720
            L+K+LRE+T A M D K AL + + D+EAA   LR +G   A+KKS R A EGL+A L   + K+ V IELN ETDFV++NE FQ             E +                     L   K      V + +T + A +GEN++LRR   L   +   V+ YLH     G+ R+  L++LE   G+     LK VG ++ MH+
Sbjct:    8 LVKELREKTDAGMMDCKKALQENNGDLEAAADWLRTKGLSKAAKKSDRAAAEGLVAGLVSADGKSGVLIELNAETDFVAKNEKFQDAARRIAATALVHEALE-------------------TLHEAKTAEGEVVNDLVTGLIATIGENMRLRRSERLRVEN-GAVALYLHNVQGEGVARLGVLVALE---GAGDQAVLKDVGRKIAMHV 193          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_GEOTN (Elongation factor Ts OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 71/212 (33.49%), Postives = 108/212 (50.94%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K AL + + D+E A+  LR++G   A+KK+ R A EG+  +A   + A ++E+N ETDFV++NE FQ               V +  + L    P  L+     L      G +TVQ+ I E  A +GE + LRR  +++ +  E    YLH       GRI G+L+L  G  +      + V  ++ MHI A  P
Sbjct:    7 MVKELREKTGAGMMDCKKALTETNGDMEKAIDWLREKGIAKAAKKADRIAAEGMTYIATEGNAAVILEVNSETDFVAKNEAFQTL-------------VKELAAHLLKQKPATLDEA---LGQTMSSG-STVQDYINEAVAKIGEKITLRRFAVVNKADDETFGAYLHMG-----GRI-GVLTLLAGSAT------EEVAKDVAMHIAALHP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STAHJ (Elongation factor Ts OS=Staphylococcus haemolyticus (strain JCSC1435) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 68/212 (32.08%), Postives = 107/212 (50.47%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T A M D K AL + D DI+ A+  LR++G   A+KK+ R A EGL+ +    ++AA++E+N ETDFV+RNE FQ             E V +  + +     E ++ L       K+    TV   + E  + +GE + +RR  + + S  +    YLH   + G+        L V +GS+  +  K    ++ MHI A  P
Sbjct:    7 LVKELRERTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKGNEAAIVEINSETDFVARNEGFQ-------------ELVKEIANQVLDSKAETVDALL----ETKLSSGKTVDERMKEAISTIGEKLSIRRFEIRTKSDNDAFGAYLHMGGRIGV--------LTVVEGSTDEEAAK----DVAMHIAAINP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STAES (Elongation factor Ts OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 66/212 (31.13%), Postives = 108/212 (50.94%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T A M D K AL + D DI+ A+  LR++G   A+KK+ R A EGL+ +   +++AA++E+N ETDFV+RNE FQ             E V +  + +     E ++ L       K+    TV   + E  + +GE + +RR  + + +  +    YLH   + G+        L V +G++  +  K    ++ MHI A  P
Sbjct:    7 LVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKDNEAAIVEINSETDFVARNEGFQ-------------ELVKEIANHILDSKVETVDALM----ESKLSSGKTVDERMKEAISTIGEKLSIRRFSIRTKTDNDAFGAYLHMGGRIGV--------LTVVEGTTDEEAAK----DVAMHIAAINP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STAEQ (Elongation factor Ts OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tsf PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 66/212 (31.13%), Postives = 108/212 (50.94%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T A M D K AL + D DI+ A+  LR++G   A+KK+ R A EGL+ +   +++AA++E+N ETDFV+RNE FQ             E V +  + +     E ++ L       K+    TV   + E  + +GE + +RR  + + +  +    YLH   + G+        L V +G++  +  K    ++ MHI A  P
Sbjct:    7 LVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVEVKDNEAAIVEINSETDFVARNEGFQ-------------ELVKEIANHILDSKVETVDALM----ESKLSSGKTVDERMKEAISTIGEKLSIRRFSIRTKTDNDAFGAYLHMGGRIGV--------LTVVEGTTDEEAAK----DVAMHIAAINP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_BACHD (Elongation factor Ts OS=Bacillus halodurans GN=tsf PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.599e-19
Identity = 71/213 (33.33%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   97 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +++K+LRE+T A M D K AL + + D++ A+  LR++G   A+KK+ R A EGL  +    + A ++E+N ETDFV++NE FQ             + V++  S L    P  +E     L+ P  GGE TVQ  I    A +GE + LRR  ++     +V   Y+H       GRI G+LS+ +G  S      + +  ++ MH+ A  P
Sbjct:    6 SMVKELREKTGAGMMDCKKALTETNGDMDKAIDYLREKGIAKAAKKADRVAAEGLAYVKAEGNHAIIVEVNSETDFVAKNENFQ-------------KLVAELASHLLEKRPASVEEA---LEQPFNGGE-TVQEYINSAIAKIGEKLSLRRFEIVEKEDGDVFGQYIHMG-----GRI-GVLSV-IGQSSD-----EELAKDIAMHVAAINP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_RHILO (Elongation factor Ts OS=Rhizobium loti GN=tsf PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.088e-19
Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +K+LR+ T A M D K AL + + ++E A+  LRK+G   A KK+ RTA EGL+ +     +AAV+E+N ETDFV+RN  FQ                    +  +P                  G + +V + I +    +GEN+  RR   L+      V+TY+H +   GLG++  L+++E      + +     G ++ MH+ A  P
Sbjct:    8 VKELRDLTGAGMMDCKAALNETNGNMEEAVDWLRKKGISKADKKAGRTAAEGLIGVDAGVREAAVVEVNSETDFVARNAAFQEIVANVAKVALAYGTTEAVAAAKYP------------------GSDKSVTDTIKDAVGTIGENLGFRRSAKLTVPH-GAVATYVHNAVADGLGKLGVLVAIETTGNEHAANAF---GRQVAMHVAATNP 196          
The following BLAST results are available for this feature:
BLAST of EY659560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_WOLPP9.372e-2033.65Elongation factor Ts OS=Wolbachia pipientis subsp.... [more]
EFTS_RICTY9.372e-2032.23Elongation factor Ts OS=Rickettsia typhi GN=tsf PE... [more]
EFTS_RICPR9.372e-2032.08Elongation factor Ts OS=Rickettsia prowazekii GN=t... [more]
EFTS_PHEZH1.224e-1935.41Elongation factor Ts OS=Phenylobacterium zucineum ... [more]
EFTS_GEOTN1.224e-1933.49Elongation factor Ts OS=Geobacillus thermodenitrif... [more]
EFTS_STAHJ1.599e-1932.08Elongation factor Ts OS=Staphylococcus haemolyticu... [more]
EFTS_STAES1.599e-1931.13Elongation factor Ts OS=Staphylococcus epidermidis... [more]
EFTS_STAEQ1.599e-1931.13Elongation factor Ts OS=Staphylococcus epidermidis... [more]
EFTS_BACHD1.599e-1933.33Elongation factor Ts OS=Bacillus halodurans GN=tsf... [more]
EFTS_RHILO2.088e-1929.86Elongation factor Ts OS=Rhizobium loti GN=tsf PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659560 ID=EY659560; Name=EY659560; organism=Citrus sinensis; type=EST; length=941bp
GACTTATTCTCATTCAAATACCTGAACCCAAAATCCTCTTTTGCTTTAAT
TTCAAGAAACTTCAGTGATCAAGCTCCTGCGGCTACGGAGCAAGTGAATC
TCATTAAGCAGTTAAGGGAACAAACAAGTGCTCCAATGAAGGATGTCAAG
TTGGCTCTTGTTGATTGCGATTGGGATATTGAGGCTGCACTGAAGGAATT
GAGGAAACGAGGGAAAGTTCTGGCGTCAAAGAAGTCGTCTCGAACTGCCA
CTGAGGGCTTACTTGCTTTAGCGCAGAATGAGAGCAAGGCTGCTGTTATT
GAGCTTAATTGTGAGACCGATTTTGTTTCCAGGAATGAGATATTTCAGTA
CTTGGCCTTAGCTTTGGCAAAGCAAGCTTTGGTGGCTGAGAATGTTTCAC
AGCCAGGATCTGGGCTCTTTCCTGTTGGTCCTGAGTATTTGGAGGGCTTG
AAGTTGAATCTTGATCATCCAAAAATAGGTGGAGAAACAACTGTCCAGAA
TGCAATTACTGAAGTAGCTGCAATTATGGGGGAGAATGTAAAACTTAGGA
GGGGTTTTTTACTATCTGCATCTTCACCTGAGGTTGTTTCTACCTACCTN
CACACAAGCCCTCAATCAGGTTTGGGTCGTATTGCTGGACTTCTATCTCT
TGAAGTAGGAGACGGAAGTTCATCATTCGATCCATTAAAGCGTGTAGGAT
CAGAATTGGGCATGCATATAGTTGCTCAAAAGCCATTATTTCTGACAAAG
GAGCTGTTTCTGCTGATGCTTTANAGAATGACGTGAAATTCTTAAATCTC
AGGCCGAAAGTACCAGGGAAGCCTTCATGGCGGATGAAAAATGGTGGAAG
GCGGTTGCGTAATACTATGAAAAATGGTCTGATGAACAAAAATTGGCTGA
CGATACTCTAATTTAAGACAATCTGAATATTCTTCAAGGAG
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