EY659560

Overview
NameEY659560
Unique NameEY659560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_RICB8 (Elongation factor Ts OS=Rickettsia bellii (strain OSU 85-389) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 61/211 (28.91%), Postives = 102/211 (48.34%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +++LRE+T A M D K AL++   ++E A+  LR +G   A+KK+ R A EGL A   +     V+E+N ETDFV+RNE FQ             +++ +  +   P G                    +V+  + E  A +GEN+ LRR  +L  S    + +Y+H    S LG+I+ L+ L+    +     L+ +  ++ +H+    P
Sbjct:   11 VRELREKTGAGMMDCKKALIETKGNLEEAVDFLRTKGLAAAAKKAGRVAAEGLTAAKVDGLTGVVVEINSETDFVARNEQFQNLVTNIANLAINVKDIEELKAAKMPNG-------------------KSVEEDVVENIATIGENLTLRRMEVLKVSE-GAIGSYVHNEVASNLGKISVLVGLQ--SSAKDTAKLEALAKQIAVHVAGNNP 199          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LYSSC (Elongation factor Ts OS=Lysinibacillus sphaericus (strain C3-41) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 68/212 (32.08%), Postives = 106/212 (50.00%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T A M D K ALV  D D+EAA+  LR++G   A+KK+ R A EG   + +  ++A ++E+N ETDFV++N+ FQ               VS     L    P  +E   L L + +      +++ I+   A +GE + LRR  + + +  +    YLH       GRI  L++LE    +S+         ++ MHI A  P
Sbjct:    8 LVKELREKTGAGMMDCKKALVQTDGDLEAAIDFLREKGLSSAAKKADRIAAEGTTYILEQGNEAIILEVNAETDFVAKNDKFQVL-------------VSSLAEQLLTAKPASVEA-ALELTNAE---GVKIEDQISTAVATIGEKITLRRFEIKTKTDADSFGAYLHMG-----GRIGVLVTLEGSTDASA-------AKDVAMHIAAINP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LACCB (Elongation factor Ts OS=Lactobacillus casei (strain BL23) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 66/211 (31.28%), Postives = 101/211 (47.87%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +K+LR++T   M D K ALV  D D++ A+  LR++G   A+KKS   A EGL  +A N + AA+IE+N ETDFV+ N+ F+             + V+   + +    P  LE  K      K+    TV      +  ++GE + LRR  ++  +  E    YLH       G+IA L  +E  D  ++ D        + MH+ A  P
Sbjct:    9 VKELRDRTQVGMMDAKKALVAADGDMDKAIDVLREKGLAKAAKKSGNIAAEGLAEIAVNGNTAAIIEVNSETDFVASNDQFK-------------DYVNNVAAAIAANKPADLEAAKAT----KMSDGQTVDEGAIALTTVIGEKISLRRFQVVEKTDNEHFGKYLHNG-----GQIAALTVIEGADDDTAKD--------VAMHVAAINP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_LACC3 (Elongation factor Ts OS=Lactobacillus casei (strain ATCC 334) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 66/211 (31.28%), Postives = 101/211 (47.87%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +K+LR++T   M D K ALV  D D++ A+  LR++G   A+KKS   A EGL  +A N + AA+IE+N ETDFV+ N+ F+             + V+   + +    P  LE  K      K+    TV      +  ++GE + LRR  ++  +  E    YLH       G+IA L  +E  D  ++ D        + MH+ A  P
Sbjct:    9 VKELRDRTQVGMMDAKKALVAADGDMDKAIDVLREKGLAKAAKKSGNIAAEGLAEIAVNGNTAAIIEVNSETDFVASNDQFK-------------DYVNNVAAAIAANKPADLEAAKAT----KMSDGQTVDEGAIALTTVIGEKISLRRFQVVEKTDNEHFGKYLHNG-----GQIAALTVIEGADDDTAKD--------VAMHVAAINP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_HELHP (Elongation factor Ts OS=Helicobacter hepaticus GN=tsf PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.353e-18
Identity = 67/214 (31.31%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLA--LAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+KQLRE T A M D K ALV+ + ++E A++ LR++G   A+KK+ R A+EG+++  +A + SKA++IE+N ETDFV++N+ F+             E V+Q    ++       + L     H    G    +  + +  A +GEN+ +RR   + A    +V+ Y+H++     GR+  L++++  D  SS      +   + MH  A KP
Sbjct:    8 LVKQLREMTDAGMMDCKKALVETEGNLEKAVEYLREKGLSKAAKKADRIASEGIVSVEVANDFSKASIIEINSETDFVAKNDTFK-------------ELVAQTSKIVYDNALSSAQSL-----HTMSIGGVKFEEYLQQNIAKIGENIVVRRIASIEAQGKGIVNGYVHSN-----GRVGVLIAMKF-DKESSKVACVELAKSICMHAAAMKP 197          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRSV (Elongation factor Ts OS=Streptococcus sanguinis (strain SK36) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.768e-18
Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAV+E+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD +        +  ++ MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVVEVNAETDFVAKNAQF-------VDLVNATAKVIAEGK---PANNE--EALALTMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVIEGGDDA--------LAKQISMHIAAMKP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRGC (Elongation factor Ts OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.768e-18
Identity = 71/212 (33.49%), Postives = 103/212 (48.58%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAV+E+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  ++ MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVVEVNAETDFVAKNAQF-------VDLVNATAKVIAEGK---PANNE--EALALTMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVIEGGD--------EALAKQISMHIAAMKP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_RICFE (Elongation factor Ts OS=Rickettsia felis GN=tsf PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.768e-18
Identity = 64/211 (30.33%), Postives = 100/211 (47.39%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +K+LRE+T A M D K AL++   + E A+  LRK+G   A+KK+ R A+EGL A   +     V+E+N ETDFV+RNE FQ             + +                     L   K+    +V+  I E  A +GEN+ LRR  +L  S    + +Y+H      LG+I+ L+ LE    +     L+ +  ++ +H+    P
Sbjct:   11 VKELREKTGAGMMDCKKALIETSGNFEEAIDFLRKKGLAAAAKKAGRIASEGLTAAKVDGLTGVVVEVNSETDFVARNEQFQDLVKDIANLAVIAKTID-------------------TLKTSKMQSGKSVEEEIIENIATIGENLTLRRMDILEISE-GAIGSYVHNEVVPNLGKISVLVGLE--SNAKDKTKLEALAKQVAVHVAGNNP 199          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_XANOR (Elongation factor Ts OS=Xanthomonas oryzae pv. oryzae GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   97 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +L+K+LRE+T A M + K ALV+   DI+AA + LRK G   A KK+ R A EG +A AQ   KA ++E+N ETDFV+++E F              E V+           E L+ +KL+       GE T++     V A +GEN+++RR  L+   S   V+ Y+H       GRI  L+ L+ GD          +   + MHI A  P
Sbjct:    6 SLVKELRERTGAGMMECKKALVENAGDIDAAAEWLRKSGLAKADKKADRVAAEGRIATAQAGGKAVLVEVNSETDFVAKDENF----------LAFTEVVANAALNSDAADAEALKSVKLD------SGE-TIEERRAAVIAKVGENLQVRR--LVRIDSANNVAAYVHG------GRIGVLVELKGGD--------IELARGIAMHIAAMNP 185          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_XANOP (Elongation factor Ts OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   97 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +L+K+LRE+T A M + K ALV+   DI+AA + LRK G   A KK+ R A EG +A AQ   KA ++E+N ETDFV+++E F              E V+           E L+ +KL+       GE T++     V A +GEN+++RR  L+   S   V+ Y+H       GRI  L+ L+ GD          +   + MHI A  P
Sbjct:    6 SLVKELRERTGAGMMECKKALVENAGDIDAAAEWLRKSGLAKADKKADRVAAEGRIATAQAGGKAVLVEVNSETDFVAKDENF----------LAFTEVVANAALNSDAADAEALKSVKLD------SGE-TIEERRAAVIAKVGENLQVRR--LVRIDSANNVAAYVHG------GRIGVLVELKGGD--------IELARGIAMHIAAMNP 185          
The following BLAST results are available for this feature:
BLAST of EY659560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_RICB81.353e-1828.91Elongation factor Ts OS=Rickettsia bellii (strain ... [more]
EFTS_LYSSC1.353e-1832.08Elongation factor Ts OS=Lysinibacillus sphaericus ... [more]
EFTS_LACCB1.353e-1831.28Elongation factor Ts OS=Lactobacillus casei (strai... [more]
EFTS_LACC31.353e-1831.28Elongation factor Ts OS=Lactobacillus casei (strai... [more]
EFTS_HELHP1.353e-1831.31Elongation factor Ts OS=Helicobacter hepaticus GN=... [more]
EFTS_STRSV1.768e-1833.49Elongation factor Ts OS=Streptococcus sanguinis (s... [more]
EFTS_STRGC1.768e-1833.49Elongation factor Ts OS=Streptococcus gordonii (st... [more]
EFTS_RICFE1.768e-1830.33Elongation factor Ts OS=Rickettsia felis GN=tsf PE... [more]
EFTS_XANOR2.308e-1834.74Elongation factor Ts OS=Xanthomonas oryzae pv. ory... [more]
EFTS_XANOP2.308e-1834.74Elongation factor Ts OS=Xanthomonas oryzae pv. ory... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659560 ID=EY659560; Name=EY659560; organism=Citrus sinensis; type=EST; length=941bp
GACTTATTCTCATTCAAATACCTGAACCCAAAATCCTCTTTTGCTTTAAT
TTCAAGAAACTTCAGTGATCAAGCTCCTGCGGCTACGGAGCAAGTGAATC
TCATTAAGCAGTTAAGGGAACAAACAAGTGCTCCAATGAAGGATGTCAAG
TTGGCTCTTGTTGATTGCGATTGGGATATTGAGGCTGCACTGAAGGAATT
GAGGAAACGAGGGAAAGTTCTGGCGTCAAAGAAGTCGTCTCGAACTGCCA
CTGAGGGCTTACTTGCTTTAGCGCAGAATGAGAGCAAGGCTGCTGTTATT
GAGCTTAATTGTGAGACCGATTTTGTTTCCAGGAATGAGATATTTCAGTA
CTTGGCCTTAGCTTTGGCAAAGCAAGCTTTGGTGGCTGAGAATGTTTCAC
AGCCAGGATCTGGGCTCTTTCCTGTTGGTCCTGAGTATTTGGAGGGCTTG
AAGTTGAATCTTGATCATCCAAAAATAGGTGGAGAAACAACTGTCCAGAA
TGCAATTACTGAAGTAGCTGCAATTATGGGGGAGAATGTAAAACTTAGGA
GGGGTTTTTTACTATCTGCATCTTCACCTGAGGTTGTTTCTACCTACCTN
CACACAAGCCCTCAATCAGGTTTGGGTCGTATTGCTGGACTTCTATCTCT
TGAAGTAGGAGACGGAAGTTCATCATTCGATCCATTAAAGCGTGTAGGAT
CAGAATTGGGCATGCATATAGTTGCTCAAAAGCCATTATTTCTGACAAAG
GAGCTGTTTCTGCTGATGCTTTANAGAATGACGTGAAATTCTTAAATCTC
AGGCCGAAAGTACCAGGGAAGCCTTCATGGCGGATGAAAAATGGTGGAAG
GCGGTTGCGTAATACTATGAAAAATGGTCTGATGAACAAAAATTGGCTGA
CGATACTCTAATTTAAGACAATCTGAATATTCTTCAAGGAG
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