EY659560

Overview
NameEY659560
Unique NameEY659560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_XANOM (Elongation factor Ts OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 1 
Query:   97 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +L+K+LRE+T A M + K ALV+   DI+AA + LRK G   A KK+ R A EG +A AQ   KA ++E+N ETDFV+++E F              E V+           E L+ +KL+       GE T++     V A +GEN+++RR  L+   S   V+ Y+H       GRI  L+ L+ GD          +   + MHI A  P
Sbjct:    6 SLVKELRERTGAGMMECKKALVENAGDIDAAAEWLRKSGLAKADKKADRVAAEGRIATAQAGGKAVLVEVNSETDFVAKDENF----------LAFTEVVANAALNSDAADAEALKSVKLD------SGE-TIEERRAAVIAKVGENLQVRR--LVRIDSANNVAAYVHG------GRIGVLVELKGGD--------IELARGIAMHIAAMNP 185
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_XANC5 (Elongation factor Ts OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 1 
Query:   97 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +L+K+LRE+T A M + K ALV+   DI+AA + LRK G   A KK+ R A EG +A AQ   KA ++E+N ETDFV+++E F              E V+           E L+ +KL+       GE T++     V A +GEN+++RR  L+   S   V+ Y+H       GRI  L+ L+ GD          +   + MHI A  P
Sbjct:    6 SLVKELRERTGAGMMECKKALVENAGDIDAAAEWLRKSGLAKADKKADRVAAEGRIATAQAGGKAVLVEVNSETDFVAKDENF----------LAFTEVVANAALNSDAADAEALKSVKLD------SGE-TIEERRAAVIAKVGENLQVRR--LVRIDSANNVAAYVHG------GRIGVLVELKGGD--------IELARGIAMHIAAMNP 185
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_XANAC (Elongation factor Ts OS=Xanthomonas axonopodis pv. citri GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 1 
Query:   97 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +L+K+LRE+T A M + K ALV+   DI+AA + LRK G   A KK+ R A EG +A AQ   KA ++E+N ETDFV+++E F              E V+           E L+ +KL+       GE T++     V A +GEN+++RR  L+   S   V+ Y+H       GRI  L+ L+ GD          +   + MHI A  P
Sbjct:    6 SLVKELRERTGAGMMECKKALVENAGDIDAAAEWLRKSGLAKADKKADRVAAEGRIATAQAGGKAVLVEVNSETDFVAKDENF----------LAFTEVVANAALNSDAADAEALKSVKLD------SGE-TIEERRAAVIAKVGENLQVRR--LVRIDSANNVAAYVHG------GRIGVLVELKGGD--------IELARGIAMHIAAMNP 185
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRZT (Elongation factor Ts OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRZP (Elongation factor Ts OS=Streptococcus pneumoniae (strain P1031) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRZJ (Elongation factor Ts OS=Streptococcus pneumoniae (strain JJA) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRR6 (Elongation factor Ts OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tsf PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRPS (Elongation factor Ts OS=Streptococcus pneumoniae (strain CGSP14) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRPN (Elongation factor Ts OS=Streptococcus pneumoniae GN=tsf PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
[Close]
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_STRPJ (Elongation factor Ts OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=tsf PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.308e-18
Identity = 73/212 (34.43%), Postives = 103/212 (48.58%), Query Frame = 1 
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++ A + D K ALV+ D DIE A++ LR++G   A+KK+ R A EGL  +  N + AAVIE+N ETDFV++N  F                V   G    P   E  E L L +      GE T++ A     A +GE +  RR  L+  +  +    Y H       GRI  +  +E GD        + +  +L MHI A KP
Sbjct:    8 LVKELREKSGAGVMDAKKALVETDGDIEKAIELLREKGMAKAAKKADRVAAEGLTGVYVNGNVAAVIEVNAETDFVAKNAQF-------VELVNTTAKVIAEGK---PANNE--EALALIMP----SGE-TLEAAYVSATATIGEKISFRRFALIEKTDAQHFGAYQHNG-----GRIGVISVVEGGD--------EALAKQLSMHIAAMKP 189
The following BLAST results are available for this feature:
BLAST of EY659560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_XANOM2.308e-1834.74Elongation factor Ts OS=Xanthomonas oryzae pv. ory... [more]
EFTS_XANC52.308e-1834.74Elongation factor Ts OS=Xanthomonas campestris pv.... [more]
EFTS_XANAC2.308e-1834.74Elongation factor Ts OS=Xanthomonas axonopodis pv.... [more]
EFTS_STRZT2.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae (... [more]
EFTS_STRZP2.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae (... [more]
EFTS_STRZJ2.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae (... [more]
EFTS_STRR62.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae (... [more]
EFTS_STRPS2.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae (... [more]
EFTS_STRPN2.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae G... [more]
EFTS_STRPJ2.308e-1834.43Elongation factor Ts OS=Streptococcus pneumoniae (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659560 ID=EY659560; Name=EY659560; organism=Citrus sinensis; type=EST; length=941bp
GACTTATTCTCATTCAAATACCTGAACCCAAAATCCTCTTTTGCTTTAAT
TTCAAGAAACTTCAGTGATCAAGCTCCTGCGGCTACGGAGCAAGTGAATC
TCATTAAGCAGTTAAGGGAACAAACAAGTGCTCCAATGAAGGATGTCAAG
TTGGCTCTTGTTGATTGCGATTGGGATATTGAGGCTGCACTGAAGGAATT
GAGGAAACGAGGGAAAGTTCTGGCGTCAAAGAAGTCGTCTCGAACTGCCA
CTGAGGGCTTACTTGCTTTAGCGCAGAATGAGAGCAAGGCTGCTGTTATT
GAGCTTAATTGTGAGACCGATTTTGTTTCCAGGAATGAGATATTTCAGTA
CTTGGCCTTAGCTTTGGCAAAGCAAGCTTTGGTGGCTGAGAATGTTTCAC
AGCCAGGATCTGGGCTCTTTCCTGTTGGTCCTGAGTATTTGGAGGGCTTG
AAGTTGAATCTTGATCATCCAAAAATAGGTGGAGAAACAACTGTCCAGAA
TGCAATTACTGAAGTAGCTGCAATTATGGGGGAGAATGTAAAACTTAGGA
GGGGTTTTTTACTATCTGCATCTTCACCTGAGGTTGTTTCTACCTACCTN
CACACAAGCCCTCAATCAGGTTTGGGTCGTATTGCTGGACTTCTATCTCT
TGAAGTAGGAGACGGAAGTTCATCATTCGATCCATTAAAGCGTGTAGGAT
CAGAATTGGGCATGCATATAGTTGCTCAAAAGCCATTATTTCTGACAAAG
GAGCTGTTTCTGCTGATGCTTTANAGAATGACGTGAAATTCTTAAATCTC
AGGCCGAAAGTACCAGGGAAGCCTTCATGGCGGATGAAAAATGGTGGAAG
GCGGTTGCGTAATACTATGAAAAATGGTCTGATGAACAAAAATTGGCTGA
CGATACTCTAATTTAAGACAATCTGAATATTCTTCAAGGAG
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