EY659560

Overview
NameEY659560
Unique NameEY659560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERPP (Elongation factor Ts OS=Yersinia pestis (strain Pestoides F) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERPN (Elongation factor Ts OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERPG (Elongation factor Ts OS=Yersinia pestis bv. Antiqua (strain Angola) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERPE (Elongation factor Ts OS=Yersinia pestis GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERPB (Elongation factor Ts OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERPA (Elongation factor Ts OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_YERP3 (Elongation factor Ts OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEG-LLALAQNESKAAVI-ELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T+A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG +LA    + K  VI ELNCETDFV+++  F+             E ++             ++ LK   +  +             + A +GEN+ +RR  +L     +++ TYLH +      RI  +++    D        + +   + MHI A KP
Sbjct:    8 LVKELRERTAAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRIAAEGIILAKVSADGKYGVILELNCETDFVAKDAGFK-AFGEEVINAALAEKIAD------------IDVLKAKFEEQR-----------ANLVAKIGENINIRRVAVLEG---DILGTYLHGA------RIGVMVAATGAD--------EELVKHIAMHIAASKP 180          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_VIBF1 (Elongation factor Ts OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 59/218 (27.06%), Postives = 101/218 (46.33%), Query Frame = 1
Query:   82 ATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            AT    L+K+LRE+T A M + K ALV+ + DIE A++ +RK G   A+KK+   A EG + + +    AA++E+NC+TDFV+++  F              +                +E L+   +  ++            + A +GEN+ +RR   ++ S+   +++Y H       G   G++    GD     + LK +     MH+ A KP
Sbjct:    2 ATVTAALVKELRERTGAGMMECKKALVEANADIELAIENMRKSGAAKAAKKAGNVAAEGAIIIKEENGVAALLEVNCQTDFVAKDSNFTAFAEEVVAAAVATQAT--------------VEELQAQFEETRVA-----------LVAKIGENINIRRVQYVAGSA---LASYRH-------GEKIGVVVAGEGDA----ETLKHI----AMHVAASKP 176          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_MYCA5 (Elongation factor Ts OS=Mycoplasma arthritidis (strain 158L3-1) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 62/211 (29.38%), Postives = 102/211 (48.34%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +K+LRE+T++ + D K AL   D DIE A+K L++ G + A+KKS+R A EG+      ++ A + ELN ETDFV+RN++F                 +   S +       ++G+             T++ +  ++ A +GE + LRR     A   EVV+ Y H +      R+A    + +  G++  + L+ V     MHI A  P
Sbjct:    8 LKELRERTNSGLLDCKNALEATDNDIEKAIKWLQENGIIKAAKKSARIAAEGITKAYIKDNVAVLFELNAETDFVARNQLF-----IDLANKIQDALAANDFSDIEAANKVKIDGM-------------TIEESCQDLTAKIGEKITLRRAEKFVAKPGEVVAGYTHAN-----SRVA---DIAIAKGANQ-EALRHV----TMHIAALNP 187          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_HAEPS (Elongation factor Ts OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=tsf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.004e-13
Identity = 61/212 (28.77%), Postives = 97/212 (45.75%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T A M + K ALV+ + DIE A+  +RK G+  A+KK+ R A EG++          ++E+NCETDFV+++  F              +  S             +E L+   +  +             + A +GEN+ +RR   L     +V++ YLH       G   G+L      G  + + LK+V     MH+ A KP
Sbjct:    8 LVKELRERTGAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRVAAEGVILARIGAGFGVLVEMNCETDFVAKDAGFVGLANEVADYALANKGTS-------------IEALQAQFEEKR-----------AALVAKIGENMNIRRVQYLEG---QVIAQYLH-------GAKIGVLVA----GQGAEEELKKV----AMHVAASKP 177          
The following BLAST results are available for this feature:
BLAST of EY659560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_YERPP1.004e-1329.91Elongation factor Ts OS=Yersinia pestis (strain Pe... [more]
EFTS_YERPN1.004e-1329.91Elongation factor Ts OS=Yersinia pestis bv. Antiqu... [more]
EFTS_YERPG1.004e-1329.91Elongation factor Ts OS=Yersinia pestis bv. Antiqu... [more]
EFTS_YERPE1.004e-1329.91Elongation factor Ts OS=Yersinia pestis GN=tsf PE=... [more]
EFTS_YERPB1.004e-1329.91Elongation factor Ts OS=Yersinia pseudotuberculosi... [more]
EFTS_YERPA1.004e-1329.91Elongation factor Ts OS=Yersinia pestis bv. Antiqu... [more]
EFTS_YERP31.004e-1329.91Elongation factor Ts OS=Yersinia pseudotuberculosi... [more]
EFTS_VIBF11.004e-1327.06Elongation factor Ts OS=Vibrio fischeri (strain AT... [more]
EFTS_MYCA51.004e-1329.38Elongation factor Ts OS=Mycoplasma arthritidis (st... [more]
EFTS_HAEPS1.004e-1328.77Elongation factor Ts OS=Haemophilus parasuis serov... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659560 ID=EY659560; Name=EY659560; organism=Citrus sinensis; type=EST; length=941bp
GACTTATTCTCATTCAAATACCTGAACCCAAAATCCTCTTTTGCTTTAAT
TTCAAGAAACTTCAGTGATCAAGCTCCTGCGGCTACGGAGCAAGTGAATC
TCATTAAGCAGTTAAGGGAACAAACAAGTGCTCCAATGAAGGATGTCAAG
TTGGCTCTTGTTGATTGCGATTGGGATATTGAGGCTGCACTGAAGGAATT
GAGGAAACGAGGGAAAGTTCTGGCGTCAAAGAAGTCGTCTCGAACTGCCA
CTGAGGGCTTACTTGCTTTAGCGCAGAATGAGAGCAAGGCTGCTGTTATT
GAGCTTAATTGTGAGACCGATTTTGTTTCCAGGAATGAGATATTTCAGTA
CTTGGCCTTAGCTTTGGCAAAGCAAGCTTTGGTGGCTGAGAATGTTTCAC
AGCCAGGATCTGGGCTCTTTCCTGTTGGTCCTGAGTATTTGGAGGGCTTG
AAGTTGAATCTTGATCATCCAAAAATAGGTGGAGAAACAACTGTCCAGAA
TGCAATTACTGAAGTAGCTGCAATTATGGGGGAGAATGTAAAACTTAGGA
GGGGTTTTTTACTATCTGCATCTTCACCTGAGGTTGTTTCTACCTACCTN
CACACAAGCCCTCAATCAGGTTTGGGTCGTATTGCTGGACTTCTATCTCT
TGAAGTAGGAGACGGAAGTTCATCATTCGATCCATTAAAGCGTGTAGGAT
CAGAATTGGGCATGCATATAGTTGCTCAAAAGCCATTATTTCTGACAAAG
GAGCTGTTTCTGCTGATGCTTTANAGAATGACGTGAAATTCTTAAATCTC
AGGCCGAAAGTACCAGGGAAGCCTTCATGGCGGATGAAAAATGGTGGAAG
GCGGTTGCGTAATACTATGAAAAATGGTCTGATGAACAAAAATTGGCTGA
CGATACTCTAATTTAAGACAATCTGAATATTCTTCAAGGAG
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