EY659560

Overview
NameEY659560
Unique NameEY659560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_WOLWR (Elongation factor Ts OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 78/212 (36.79%), Postives = 115/212 (54.25%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLE-VGDGSSSFDPLKRVGSELGMHIVAQKP 735
            I++LR++T   + D K AL +CD DI+ A+ +LR  G   A KKS R A++GL+A+   E+   +IELNCETDFV+RNE F              E V    S         ++ LK N  +  IG   TVQ AI    +++GE ++L +   L A    V++ Y+H     GLG+I  L++L+  GD +     L+ +G ++ MHIVA KP
Sbjct:    8 IRELRDRTGLGLSDCKKALEECDGDIKKAVDKLRTIGLAKADKKSDRVASDGLVAMCLTENCGVLIELNCETDFVARNEKF-------------IELVLNLASIAHQERCTSVDELK-NAKYESIG---TVQEAIMNGTSVLGEKLELSKLCYLEAKD-GVIAGYVH-GDVCGLGKIGALIALQSPGDKAK----LQEIGKQIAMHIVAMKP 196          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_SILPO (Elongation factor Ts OS=Silicibacter pomeroyi GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 71/212 (33.49%), Postives = 109/212 (51.42%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LR+ T A M D K AL + D D+EAA+  LR +G   A+KKS RTA EGL+A+     K   +E+N ETDFV++N  FQ             ++V                     L    +GG+ +V + +T   A +GEN+ +RR   L+    E V TY+H +  +G+G+I  L++++ GD        + +G ++ MHI A  P
Sbjct:    7 LVKELRDSTGAGMMDAKKALTETDGDMEAAVDWLRTKGLAKAAKKSGRTAAEGLVAVVVEGGKGVAVEVNSETDFVAKNSDFQEMVGKIAAAALAADDVDA-------------------LLAADLGGK-SVADTLTAKIATIGENMSVRR---LAKLEGETVVTYVHNAATTGMGKIGVLVAMKGGD--------EALGKQVAMHIAAVNP 187          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_OCEIH (Elongation factor Ts OS=Oceanobacillus iheyensis GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 72/212 (33.96%), Postives = 110/212 (51.89%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE+T A M D K AL + + DIE A+  LR++G   A+KK+ R A EGL  +    +KAA+IE+NCETDFV++N+ F+             + +S+ G  +    P  +E     L     G   TV++ IT   A +GE + LRR  +L  +  +    YLH      +G   G+LSL  G         ++VG ++ MH+ A  P
Sbjct:    7 MVKELREKTGAGMMDCKKALQETNGDIEQAIDFLREKGMAKAAKKADRVAAEGLTHIEVEGNKAAIIEVNCETDFVTKNDQFK-------------QLLSELGKHIVANEPATVEEA---LQQKLHGDGETVESVITNAVAKIGEKISLRRFEVLEKTDNDAFGAYLH------MGGTIGVLSLLEGTTD------EQVGKDIAMHVAAVNP 190          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_HYPNA (Elongation factor Ts OS=Hyphomonas neptunium (strain ATCC 15444) GN=tsf PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 78/214 (36.45%), Postives = 112/214 (52.34%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLA--LAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE+T A M D K ALV+ + D  AA++ LR +G   A+KKS R A EGL+A  L+ +    A++ELN ETDFV+RNEIFQ             +   +  S      P+               GE +V + I  + A +GEN+ LRR   LSA+    V+ Y H +   G+G++  L++L   DGS     L+  G ++ MHI A  P
Sbjct:    8 LVKELREKTGAGMMDAKKALVENNGDQAAAIEWLRAKGLSKAAKKSDRAAAEGLVAVKLSDDGKSGAIVELNAETDFVARNEIFQKSLDGIAVAALKADGTVEAVSA--AASPD---------------GEGSVDDLIKRMIATIGENMTLRRVAKLSATGR--VAAYTHNAVVPGMGKVGVLVAL---DGSGD---LEDAGRKVAMHIAATSP 196          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_WOLTR (Elongation factor Ts OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 75/211 (35.55%), Postives = 111/211 (52.61%), Query Frame = 1
Query:  103 IKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            I++LR++T   + D K AL +C  DI+ A+ +LR  G   A KK  R A++GL+A+   ES   +IELNCETDFV+RNE F              E +S   S  +      ++ LK    + K  G  TVQ AI    +++GE ++L R   L A    V++ Y+H   + GLG+   L++L     S     L+ VG ++ MH+VA KP
Sbjct:    6 IRELRDRTGLGLSDCKKALEECSGDIKEAIGKLRAIGLAKADKKIDRVASDGLIAMHLAESCGVLIELNCETDFVARNEKF-------------IELISNLASIAYQERCTSIDKLK----NAKYEGVGTVQEAIMNGTSVLGEKLELSRLCYLEAKD-GVIAGYVHGDVR-GLGKTGALVALR---SSGDKSKLQEVGKQIAMHVVAMKP 194          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_RHOS5 (Elongation factor Ts OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 71/212 (33.49%), Postives = 108/212 (50.94%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++K+LRE T A M D K AL + D D+EAA+  LR +G   A+KK+ RTA EGL+ +A +      +E+N ETDFV++N  FQ             ++V               E LK       +GG+ TV+  + E  A++GEN+ LRR   +S  S   V+ Y+H +   GLG+I  L++++  D          +  ++ MHI A  P
Sbjct:    7 MVKELRESTGAGMMDAKKALTETDGDMEAAVDWLRTKGLAKAAKKAGRTAAEGLVGVAVSGGTGVAVEVNSETDFVAKNADFQTMVTGFTQAALSVDDV---------------EALKA----ADMGGK-TVETTLQETIAVIGENMTLRRMAKISGDS---VAAYVHNAAADGLGKIGVLVAVKGADNG--------IAKQIAMHIAATSP 187          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_CAUCR (Elongation factor Ts OS=Caulobacter crescentus GN=tsf PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 73/217 (33.64%), Postives = 117/217 (53.92%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNE----SKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLE-VGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++   M D K AL + + DIEA++  LR +G   A+KK+ R A EGL+A+A  E      A  +E+N ETDFVSRN++FQ               ++    G         +G    +   K+ G  TVQ+ +T + A +GEN+ +RR    +  +  VV++Y+H +    LGRI  L+++E  GD ++    L+ +G ++ MH+ A  P
Sbjct:    8 LVKELREKSGVGMMDCKKALAENNGDIEASIDWLRAKGLSKAAKKADRAAAEGLVAIATAEQGAGETATAVEVNAETDFVSRNDLFQ----------GAARQIAGAALG--------TDGSVDAITAAKLAGGETVQDHLTNLIATIGENMMVRRAAKWTVEN-GVVASYIHNATAPDLGRIGVLVAVESTGDKAA----LRELGRKIAMHVAATSP 201          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_CAUCN (Elongation factor Ts OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 73/217 (33.64%), Postives = 117/217 (53.92%), Query Frame = 1
Query:  100 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNE----SKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLE-VGDGSSSFDPLKRVGSELGMHIVAQKP 735
            L+K+LRE++   M D K AL + + DIEA++  LR +G   A+KK+ R A EGL+A+A  E      A  +E+N ETDFVSRN++FQ               ++    G         +G    +   K+ G  TVQ+ +T + A +GEN+ +RR    +  +  VV++Y+H +    LGRI  L+++E  GD ++    L+ +G ++ MH+ A  P
Sbjct:    8 LVKELREKSGVGMMDCKKALAENNGDIEASIDWLRAKGLSKAAKKADRAAAEGLVAIATAEQGAGETATAVEVNAETDFVSRNDLFQ----------GAARQIAGAALG--------TDGSVDAITAAKLAGGETVQDHLTNLIATIGENMMVRRAAKWTVEN-GVVASYIHNATAPDLGRIGVLVAVESTGDKAA----LRELGRKIAMHVAATSP 201          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_MYCS5 (Elongation factor Ts OS=Mycoplasma synoviae (strain 53) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.635e-22
Identity = 71/215 (33.02%), Postives = 117/215 (54.42%), Query Frame = 1
Query:   91 QVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            ++ LIK+LR++T++ + DVK AL   D++IEAA+K L++ G V A+KKS R A+EG+++     +++ ++E+N ETDFV++NE F              +NV++    +F  G   LE         K+    TV+ A+T+  A++GE + LRR     A    V+ TYLH +      R+A ++ +    GS+S      V   + MH+ A  P
Sbjct:    5 KLELIKELRQRTNSALGDVKKALEATDYNIEAAIKWLKENGIVKAAKKSGRLASEGVVSAHGTPTQSLLLEVNSETDFVAQNEKFM----------TLVKNVTE---SVFKAGASTLE----EALQVKVSDSETVEQALTDATAVIGEKITLRRVLASKAKEGHVLGTYLHAN-----NRVAAVVEV---TGSNS-----EVAKNVAMHLAAMNP 189          
BLAST of EY659560 vs. ExPASy Swiss-Prot
Match: EFTS_MYCAP (Elongation factor Ts OS=Mycoplasma agalactiae (strain PG2) GN=tsf PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.635e-22
Identity = 70/216 (32.41%), Postives = 112/216 (51.85%), Query Frame = 1
Query:   88 EQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYXXXXXXXXXXXXENVSQPGSGLFPVGPEYLEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSASSPEVVSTYLHTSPQSGLGRIAGLLSLEVGDGSSSFDPLKRVGSELGMHIVAQKP 735
            +++ LIK+LRE+T+A M D K AL   +WD+E A+  L+K GK+ A+ K++R + +GLL  A N  +A ++ELNCETDFV+  E F                V+Q     F +  E   G +  L       E  + +AI+  +A  GE ++LRR  L+ A + + VST++H +     G+I  ++  E  D  ++          + MH+ A  P
Sbjct:    2 DKMALIKELRERTAAGMSDCKKALEVSNWDVEEAISFLKKNGKIKAASKANRISADGLLVEAGNNERAVLVELNCETDFVAHGEEF----------VALANTVAQTIVANFELVKE--NGAEAALALKLANSEEILADAISSYSAKCGEKIELRRFVLIDAGTNQSVSTFVHIN-----GKIGAIMLTEGSDAEAA--------RNVAMHLSAMNP 192          
The following BLAST results are available for this feature:
BLAST of EY659560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTS_WOLWR1.183e-2236.79Elongation factor Ts OS=Wolbachia sp. subsp. Droso... [more]
EFTS_SILPO1.183e-2233.49Elongation factor Ts OS=Silicibacter pomeroyi GN=t... [more]
EFTS_OCEIH1.183e-2233.96Elongation factor Ts OS=Oceanobacillus iheyensis G... [more]
EFTS_HYPNA1.183e-2236.45Elongation factor Ts OS=Hyphomonas neptunium (stra... [more]
EFTS_WOLTR2.018e-2235.55Elongation factor Ts OS=Wolbachia sp. subsp. Brugi... [more]
EFTS_RHOS52.018e-2233.49Elongation factor Ts OS=Rhodobacter sphaeroides (s... [more]
EFTS_CAUCR2.018e-2233.64Elongation factor Ts OS=Caulobacter crescentus GN=... [more]
EFTS_CAUCN2.018e-2233.64Elongation factor Ts OS=Caulobacter crescentus (st... [more]
EFTS_MYCS52.635e-2233.02Elongation factor Ts OS=Mycoplasma synoviae (strai... [more]
EFTS_MYCAP2.635e-2232.41Elongation factor Ts OS=Mycoplasma agalactiae (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-E06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659560 ID=EY659560; Name=EY659560; organism=Citrus sinensis; type=EST; length=941bp
GACTTATTCTCATTCAAATACCTGAACCCAAAATCCTCTTTTGCTTTAAT
TTCAAGAAACTTCAGTGATCAAGCTCCTGCGGCTACGGAGCAAGTGAATC
TCATTAAGCAGTTAAGGGAACAAACAAGTGCTCCAATGAAGGATGTCAAG
TTGGCTCTTGTTGATTGCGATTGGGATATTGAGGCTGCACTGAAGGAATT
GAGGAAACGAGGGAAAGTTCTGGCGTCAAAGAAGTCGTCTCGAACTGCCA
CTGAGGGCTTACTTGCTTTAGCGCAGAATGAGAGCAAGGCTGCTGTTATT
GAGCTTAATTGTGAGACCGATTTTGTTTCCAGGAATGAGATATTTCAGTA
CTTGGCCTTAGCTTTGGCAAAGCAAGCTTTGGTGGCTGAGAATGTTTCAC
AGCCAGGATCTGGGCTCTTTCCTGTTGGTCCTGAGTATTTGGAGGGCTTG
AAGTTGAATCTTGATCATCCAAAAATAGGTGGAGAAACAACTGTCCAGAA
TGCAATTACTGAAGTAGCTGCAATTATGGGGGAGAATGTAAAACTTAGGA
GGGGTTTTTTACTATCTGCATCTTCACCTGAGGTTGTTTCTACCTACCTN
CACACAAGCCCTCAATCAGGTTTGGGTCGTATTGCTGGACTTCTATCTCT
TGAAGTAGGAGACGGAAGTTCATCATTCGATCCATTAAAGCGTGTAGGAT
CAGAATTGGGCATGCATATAGTTGCTCAAAAGCCATTATTTCTGACAAAG
GAGCTGTTTCTGCTGATGCTTTANAGAATGACGTGAAATTCTTAAATCTC
AGGCCGAAAGTACCAGGGAAGCCTTCATGGCGGATGAAAAATGGTGGAAG
GCGGTTGCGTAATACTATGAAAAATGGTCTGATGAACAAAAATTGGCTGA
CGATACTCTAATTTAAGACAATCTGAATATTCTTCAAGGAG
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