EY659556

Overview
NameEY659556
Unique NameEY659556
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:94..1007. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.073e-48
Identity = 96/244 (39.34%), Postives = 132/244 (54.10%), Query Frame = 1
Query:   34 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            K  GWAARD SG LSP+ ++ RETG EDV ++++ CGICHTDLH  KN+ G S +PM PGHE+ GEV E                      C  C  C  DLE YCPK I +Y  +  +G  T GG++   V +++++V+ P+ M ++ AAPLLCAG+TVYSPL +F L +                              IS+S  K+ EAL+ LGAD ++   D  ++     +LD +IDTV
Sbjct:    9 KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTV 252          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.877e-48
Identity = 97/241 (40.25%), Postives = 134/241 (55.60%), Query Frame = 1
Query:   43 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            G AA+D SG L+P+ ++ R TG +DV +K+ YCG+CH+DLH IKN+ G S +PM PGHE+ GEV E                      C SC +C +++E YC K I +Y  + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+TVYSPL +F L                                IS+S  KK EALE LGAD++L S D   +Q A  +LD IIDTV
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTV 253          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.755e-47
Identity = 96/239 (40.17%), Postives = 135/239 (56.49%), Query Frame = 1
Query:   46 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDT 762
            WAARD SG LSP+ F+RR    +DV L++ +CG+C+ D+   +N    S++P+ PGHEIAG VTE                     +C  CE+C + LENYC + + T+  ++TDGT+T GGYS H+V +ERY  + PD  PL+ AAPLLCAGITVYSP+    + +                              ISTS SK+ EA++ LGAD+F+ S D +Q++    +L+ IIDT
Sbjct:   13 WAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVISTSESKRKEAIDLLGADNFVVSSDENQMETLKSSLNFIIDT 251          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.292e-47
Identity = 99/241 (41.08%), Postives = 132/241 (54.77%), Query Frame = 1
Query:   43 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+H IKN+ G S +PM PGHE+ GEV E                      C SC  C +D E YC K I  Y  + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  F L +                              IS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTI 251          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 1.138e-46
Identity = 94/239 (39.33%), Postives = 133/239 (55.65%), Query Frame = 1
Query:   46 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDT 762
            WAARD SG LSP+ F+RRE   EDV L++ +CG+C+ D+   +N +  S++P+ PGHEIAG VTE                     +C  CE+C + LEN+C K + TY S+++DGT+T GGYS H++ ++RY  + P   PL  AAPLLCAGITVY+P+    + +                               STS SK+ EA+  LGAD+F+ S D +Q++    +L  IIDT
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDT 251          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.591e-40
Identity = 90/239 (37.66%), Postives = 125/239 (52.30%), Query Frame = 1
Query:   46 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDT 762
            WAARD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+ PGHEIAG VT+                     +C  CE C    E  C K + T+  I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+    + +                               STS SKK EAL  LGA++F+ S D DQ++    +LD ++DT
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDT 252          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.377e-36
Identity = 87/241 (36.10%), Postives = 120/241 (49.79%), Query Frame = 1
Query:   46 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+H +K EWG   +P+ PGHEIAG VT                      +C  C SC   +E YC P    TY SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++  A                               +S S  K  + L  LGA S+  + DPD  +   G  D I++TV
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTV 245          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.377e-36
Identity = 87/241 (36.10%), Postives = 120/241 (49.79%), Query Frame = 1
Query:   46 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKVIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+H +K EWG   +P+ PGHEIAG VT                      +C  C SC   +E YC P    TY SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++  A                               +S S  K  + L  LGA S+  + DPD  +   G  D I++TV
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWN-AGANTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTV 245          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.541e-35
Identity = 84/225 (37.33%), Postives = 114/225 (50.67%), Query Frame = 1
Query:   94 RRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-VIPTYTSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            RR     DV + + + GICH+D+H+  +EWG  +FPM PGHEIAG VT                      +C  CE C N  E +C K V+ TY S++ DG  TYGGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +                                +S S +KK EALE LGA+ +  + DP       G  D I++TV
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTV 248          
BLAST of EY659556 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.225e-34
Identity = 85/247 (34.41%), Postives = 125/247 (50.61%), Query Frame = 1
Query:   31 VKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLHNIKNEWGFSLFPMGPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKVIPTYTSINTDGT-ITYGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYFELAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLDSRDPDQLQGAMGTLDGIIDTV 765
            +KA G  A  +   L P + +RRE G  DV++++ YCG+CH+DLH +++EW  +++P  PGHEI G V                       +C  CE C + LENYC  +  TY S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL++++ A                                +TS +K+ EA + LGAD  ++SR+ D++   + + D I++TV
Sbjct:    3 IKAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQ-AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTV 245          
The following BLAST results are available for this feature:
BLAST of EY659556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
CADH5_ARATH2.073e-4839.34Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH_MEDSA7.877e-4840.25Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH1_ORYSJ1.755e-4740.17Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH_EUCBO2.292e-4741.08Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH4_ORYSJ1.138e-4639.33Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH1_ARATH1.591e-4037.66Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU2.377e-3636.10NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.377e-3636.10NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU1.541e-3537.33Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI2.225e-3434.41Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659556 ID=EY659556; Name=EY659556; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGACCANAATAAGAACATCCAGTAAAGGCCTTTGGGTGGGC
AGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCCAGAAGGG
AAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGC
CATACTGATCTCCACAACATCAAGAATGAATGGGGCTTCTCTCTCTTCCC
TATGGGTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCA
AAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTT
GGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAAATTACTG
TCCGAAAGTGATACCCACCTACACTTCCATTAACACTGACGGAACAATCA
CATACGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGCTACATTGTT
CGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCCCTGCTTTGCGC
CGGGATTACCGTGTACAGTCCATTGAAATACTTTGAACTAGCAGAACAAG
GAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTC
AAATTTGCCAAGGCTTTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCC
AAGCAAGAAGACTGAAGCTCTTGAACATCTTGGCGCTGATTCATTTTTGG
ATAGCCGTGACCCTGACCAATTGCAGGGTGCCATGGGCACATTGGATGGT
ATTATCGACACGGTGTCCCTTGTGCACCCCATTTTGCCATTGCTCGGTCT
ATTATAGTCCAAGGGCAAGCTCGTTCTTGGTTGTTTTNCCGGACAAGCAC
TCCGACCTCCTGGGATTTCCTAATCATGGGGAGGAAGAGGGGGTCAGGAC
CACCTTTGCGGGATCG
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