EY659555 | Citrus Genome Database

Overview


Name	EY659555
Unique Name	EY659555
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	897

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig5773	contig	Csv1_Contig5773:323..1218.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.094e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.51 bits (358), Expect = 3.094e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 104.375 bits (259), Expect = 2.832e-24
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQD EGIPPDQQRLIFAGKQLE+GRTL+D
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 2.832e-24
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.953e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.502 bits (345), Expect = 9.953e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 8.710e-23
Identity = 50/58 (86.21%), Postives = 53/58 (91.38%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQD EGIPPDQQRLIFA KQLE+GRTL+D
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSD 58

HSP 4 Score: 29.261 bits (64), Expect = 8.710e-23
Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLHL LRLRGG
Sbjct:   63 KESTLHLVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.112e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 125.176 bits (313), Expect = 5.112e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 87.8113 bits (216), Expect = 3.049e-19
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIFVKTLTGKTIT+E E  DT+  VK KI D EG+P DQQRLI+AGKQLED +TLAD
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLAD 58

HSP 4 Score: 28.8758 bits (63), Expect = 3.049e-19
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3

Query:  717 KESTLHLCLRLRGGD 761
            KESTLH+ LRLRGG+
Sbjct:   63 KESTLHMVLRLRGGN 77

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.313e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 122.479 bits (306), Expect = 3.313e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 85.1149 bits (209), Expect = 2.499e-18
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            MQIF+KTLTGKTIT E E ++T+ ++K KI D EG+P DQQRLIFAGKQLED +T+AD
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMAD 58

HSP 4 Score: 28.4906 bits (62), Expect = 2.499e-18
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 3

Query:  717 KESTLHLCLRLRGG 758
            KESTLH+ LRLRGG
Sbjct:   63 KESTLHMVLRLRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.259e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 2

Query:  110 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 298
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 120.553 bits (301), Expect = 1.259e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 2

Query:  338 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 526
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 3 Score: 87.0409 bits (214), Expect = 9.303e-18
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 2

Query:  566 TITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLAD 706
            TITLEVE SDTI+NVKAKIQD EGIPPDQQRLIFAGKQLEDGRTL+D
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 47

HSP 4 Score: 24.6386 bits (52), Expect = 9.303e-18
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 3

Query:  717 KESTLHLCLRLR 752
            KESTLHL LRLR
Sbjct:   52 KESTLHLVLRLR 63

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 2

Query:  311 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 73.9442 bits (180), Expect = 7.386e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2

Query:  539 IFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLADTTFKG 721
            I VKTLTGK I +++E +DTID VK ++++ EGIPP QQRLI+AGKQL D +T  D   +G
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEG 63

HSP 4 Score: 21.1718 bits (43), Expect = 7.386e-13
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 3

Query:  723 STLHLCLRLRGG 758
            S LHL L LRGG
Sbjct:   65 SVLHLVLALRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2

Query:  311 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 73.559 bits (179), Expect = 9.598e-13
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 2

Query:  539 IFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLADTTFKG 721
            I VKTLTGK I +++E +DTID +K ++++ EGIPP QQRLI+AGKQL D +T  D   +G
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEG 63

HSP 4 Score: 21.1718 bits (43), Expect = 9.598e-13
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 3

Query:  723 STLHLCLRLRGG 758
            S LHL L LRGG
Sbjct:   65 SVLHLVLALRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2

Query:  311 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 73.559 bits (179), Expect = 9.598e-13
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 2

Query:  539 IFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLADTTFKG 721
            I VKTLTGK I +++E +DTID +K ++++ EGIPP QQRLI+AGKQL D +T  D   +G
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEG 63

HSP 4 Score: 21.1718 bits (43), Expect = 9.598e-13
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 3

Query:  723 STLHLCLRLRGG 758
            S LHL L LRGG
Sbjct:   65 SVLHLVLALRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 2

Query:  311 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 532
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 73.559 bits (179), Expect = 9.598e-13
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 2

Query:  539 IFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLADTTFKG 721
            I VKTLTGK I +++E +DTID +K ++++ EGIPP QQRLI+AGKQL D +T  D   +G
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEG 63

HSP 4 Score: 21.1718 bits (43), Expect = 9.598e-13
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 3

Query:  723 STLHLCLRLRGG 758
            S LHL L LRGG
Sbjct:   65 SVLHLVLALRGG 76

[Close]

BLAST of EY659555 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 313
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 98.9821 bits (245), Expect = 3.923e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 2

Query:  305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 541
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 3 Score: 73.9442 bits (180), Expect = 1.534e-13
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 2

Query:  533 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDIEGIPPDQQRLIFAGKQLEDGRTLADTTFKG 721
            M I VKTLTGK I +++E +D +D +K ++++ EGIPP QQRLIF+GKQ+ D +T AD   +G
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQG 63

HSP 4 Score: 23.483 bits (49), Expect = 1.534e-13
Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 3

Query:  723 STLHLCLRLRGGD 761
            S LHL L LRGGD
Sbjct:   65 SVLHLVLALRGGD 77

The following BLAST results are available for this feature:

BLAST of EY659555 vs. ExPASy Swiss-Prot

BLAST of EY659555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LEIMA	3.094e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	9.953e-32	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	5.112e-28	80.26	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	3.313e-27	76.32	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	1.259e-26	95.24	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_DESAN	3.004e-20	64.86	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB2_ORYSJ	3.923e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]
RUB1_ORYSJ	3.923e-20	63.51	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
RUB1_ARATH	3.923e-20	63.51	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DROME	3.923e-20	58.23	NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-011-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659555 ID=EY659555; Name=EY659555; organism=Citrus sinensis; type=EST; length=897bp
ATTAAACTTTAAAAAAAAAAAAGAACAAAAAGCCCTTTAGTTTAGATACC
GAGGCTCCCAATCTCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTTG
ACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCCGACACGATCGACAA
CGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAGC
GGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGAT
TACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGG
CGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGG
AGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAGGAC
AAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGCA
GCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAATCCA
CGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTCAAG
ACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACACGAT
CGACAACGTGAAGGCCAAGATCCAGGACATAGAGGGGATTCCTCCGGACC
AGCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTC
GCCGATACAACATTCAAAGGAGTCCACTCTCCACCTTTGTCTCCGTCTTC
GTGGTGGTGACTTCTAAAAAAATAATGTGGATGTGTCCGCCGTTTGATTG
GATGGCGCCTATAATATTAATTACGTGGGATTGGGCGCTTTGCTTAATTA
TTTTGGATTACAATTTGTAATGGCCAGCCGTTGGGCCTAATTCCTCT