EY659553

Overview
NameEY659553
Unique NameEY659553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659553_ssr744 microsatellite EY659553_ssr744:744..759. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr268 microsatellite EY659553_ssr268:268..285. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr17 microsatellite EY659553_ssr17:17..28. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr49 microsatellite EY659553_ssr49:49..60. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML6_ARATH (Calmodulin-like protein 6 OS=Arabidopsis thaliana GN=CML6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 54/166 (32.53%), Postives = 92/166 (55.42%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL----CFD--EFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            + + +L R+F+  D++GDG ++ +ELN   + +G+    +EL  +++K  +    C D  EF     +I+                      +D+ G+E   D+ +AF+VFD NGDGFIT +EL++VL+ LGL   K+ ++CR MI   D + DG +++ EF+ MM
Sbjct:    1 MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGELYKTIMVED-------------------EDEVGEE---DMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMM 144          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML4_ARATH (Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.971e-17
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL----CFD--EFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            DL+R+F+  D+NGDG ++ EELN  LE +G+    ++L  +++K       C D  EF     SI+                           ++E  D+  AF+VFD +GDGFIT EEL SV+  LGL   K+ + C+ MI   D + DG ++++EF  MM
Sbjct:   51 DLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEFESLYGSIVE--------------------------EKEEGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIMQVDEDGDGRVNYKEFLQMM 186          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML32_ORYSJ (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica GN=CML32 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.509e-16
Identity = 62/165 (37.58%), Postives = 83/165 (50.30%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMMLRSTV 567
            L A  L+R+F+  DRNGDG ++++EL   L+ +G+    + L A V          L F D                             GDEE  ++ +AF VFDV+GDGFI++ ELQ VL +LGL +  S    R MI   D NSDG +DF EFK+MM   TV
Sbjct:   30 LNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDGAAAAGEPGGGGGDEE-EEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVDFGEFKSMMQGITV 193          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CAST_SOLTU (Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.361e-16
Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 1
Query:   88 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV------EKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L+RIF+  DRN D L+S+EEL+  L  +G+   L E+E++V      E   L F++F     S+                      ++ D   +E SDL +AF VFD NGDGFI+++ELQ VL +LGL +         MI   + + DG +DF EFK+MM
Sbjct:   41 LRRIFDVFDRNHDCLISVEELSQALNLLGLDADLSEIESMVKLHIKPENTGLRFEDFETLHRSL--------NDVFFGSKCEDKLGLNPDPAQDE-SDLKEAFDVFDENGDGFISAKELQVVLEKLGLPEGSEIDRVEMMISSVEQDHDGRVDFFEFKDMM 192          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 49/157 (31.21%), Postives = 89/157 (56.69%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 555
            D++++F++ D+N DG +S++EL  V+  +  + + EE +A++++  L  + F+   D  ++                     D  S +  I DL +AF ++D++ +G I++ EL SV+  LG  ++ S QDC+ MI   D++ DG +DFEEFK MM+
Sbjct:   15 DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDL-DEFVALFQIS----------------DQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLG--EKCSIQDCQRMINKVDSDGDGCVDFEEFKKMMM 152          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: ALLB3_BETVE (Calcium-binding allergen Bet v 3 OS=Betula verrucosa GN=BETVIII PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15
Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 1
Query:   88 LQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEI---------SDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L+RIF+  D+N DG+++++EL+  L  +G+   L ELE+ V+  +      L F++F+    S+                       D+D  +E++         +D +  F VFD +GDG+I++ ELQ VL +LG  +         MI   D+N DG +DF EFK+MM
Sbjct:   41 LRRIFDLFDKNSDGIITVDELSRALNLLGLETDLSELESTVKSFTREGNIGLQFEDFISLHQSLNDSYFAYGGE-------------DEDDNEEDMRKSILSQEEADSFGGFKVFDEDGDGYISARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDGRVDFFEFKDMM 197          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.854e-15
Identity = 54/156 (34.62%), Postives = 81/156 (51.92%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +L+ +F+K D NGDG +S +EL  ++  +G     EELE  + +     D ++ F + +                      +D +   E + D   AFSV+D++G+G I++EEL  VL  LG  DE S  +CR MI   D + DG +DFEEFK MM
Sbjct:   37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFV----------------ELNTKGMDQNDVLENLKD---AFSVYDIDGNGSISAEELHEVLRSLG--DECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML24_ORYSJ (Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica GN=CML24 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.339e-15
Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSG-----DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMMLRSTV 567
            L A  L+R+F+  DRNGDG ++++EL   L+ +G+      L A V          L F++F     ++                      V +D G     DEE+ +   AF VFDV+GDGFI++ ELQ VL +LG+ +  S  + R MI   D +SDG +DF EFK MM   TV
Sbjct:   35 LNAVRLRRVFDLFDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLHRAL-------------GDALFGSLDVPEDGGGGGGGDEEMKE---AFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEFKCMMQGITV 194          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14
Identity = 54/170 (31.76%), Postives = 82/170 (48.24%), Query Frame = 1
Query:   43 LLSLTHNMAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L S   +  P T  +L+++F+K D NGDG +S+ EL  V + +G  +T EEL  ++       DE    CD  I+                               ++ +AF ++D N +G I+S E+  VL RLG+    S +DC  MI   DT+ DG ++FEEF+ MM
Sbjct:    6 LESTNKSTTPSTDMELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVL-------DEIDIDCDGFINQEEFATIC----------------RSSSSAVEIREAFDLYDQNKNGLISSSEIHKVLNRLGM--TCSVEDCVRMIGHVDTDGDGNVNFEEFQKMM 150          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML6_ORYSJ (Putative calmodulin-like protein 6 OS=Oryza sativa subsp. japonica GN=CML6 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1
Query:   82 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALV------EKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 555
            +D +  F   D+N DG +S EEL  VL R+G+  + E+L+ ++         ++ FDEFL      +                      ++D GD+E  +L KAF +FD + +GFI+  EL  V+A LG  +E +  +   M+   D+N+DG +D+EEFK +M+
Sbjct:   11 SDFRDAFSLFDKNNDGCISREELATVLTRLGMAPSQEDLQDMIVAVDEDGNGTIEFDEFLAIMKKKL---------------------YENDKGDDE-EELRKAFRIFDKDDNGFISRNELSMVMASLG--EEMTEDEIDDMMKAADSNNDGQVDYEEFKRVMM 150          
The following BLAST results are available for this feature:
BLAST of EY659553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CML6_ARATH3.971e-1732.53Calmodulin-like protein 6 OS=Arabidopsis thaliana ... [more]
CML4_ARATH3.971e-1734.57Calmodulin-like protein 4 OS=Arabidopsis thaliana ... [more]
CML32_ORYSJ1.509e-1637.58Probable calcium-binding protein CML32 OS=Oryza sa... [more]
CAST_SOLTU3.361e-1636.65Calcium-binding protein CAST OS=Solanum tuberosum ... [more]
CML23_ARATH1.277e-1531.21Probable calcium-binding protein CML23 OS=Arabidop... [more]
ALLB3_BETVE2.179e-1531.18Calcium-binding allergen Bet v 3 OS=Betula verruco... [more]
CML25_ARATH4.854e-1534.62Probable calcium-binding protein CML25 OS=Arabidop... [more]
CML24_ORYSJ6.339e-1535.23Probable calcium-binding protein CML24 OS=Oryza sa... [more]
CML26_ARATH1.081e-1431.76Probable calcium-binding protein CML26 OS=Arabidop... [more]
CML6_ORYSJ2.409e-1431.71Putative calmodulin-like protein 6 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659553 ID=EY659553; Name=EY659553; organism=Citrus sinensis; type=EST; length=884bp
ATTGTTTTTCTGGATTGTTAGTTAGTTAATCCCCATTATATATTATTGTC
ACTCACTCACAATATGGCTCCTCTTACCGCCAATGACTTGCAAAGAATTT
TCGAGAAGCTTGATCGAAATGGCGATGGCCTGGTGAGCTTGGAGGAACTC
AACTGGGTTCTTGAAAGAATTGGGGTACATTTTACCCTTGAAGAGCTTGA
AGCCCTAGTTGAAAAACCAAGCCTCTGCTTCGATGAATTCTTGTTCTTCT
GTGATTCCATCATATCGAATAATAATAATAATAATCCCAATGCTGCTGCT
GATGCTTCCCAGAATGCTGATGAAGCAGTTGATGATGACAGCGGCGACGA
AGAGATCAGTGATCTTTACAAAGCGTTCAGTGTGTTCGATGTGAATGGTG
ATGGATTCATTACAAGCGAAGAGCTTCAGAGTGTGTTGGCGAGACTCGGA
TTGTGGGATGAAAAAAGCAGCCAAGATTGCAGAAGCATGATTTACGTGTA
TGATACCAATTCTGATGGGGTTCTTGATTTTGAAGAATTCAAGAACATGA
TGCTTCGTAGTACTGTTTCTTAATTCGTTTATTAATTTCGCGCCTGTTAA
TCTTGACCTTGTTTTTTTTTTTTTTTTTTTATAATCTGTGAAATTATGTT
GATTATATGATGGTCGTAATTTGTTAGACCCGAGATCAACATAATTAGCC
GAGCTTATTAGATTATTTNGTGGTTCGTGTAATCTTATATATATGTGTGT
GTGTGTGTGTACGTATGATCCTTCAAATATGCGTTTCCTTGTGTAAAAAA
AAAAAAACCTATCATAANATCCATATCGGCGCGCCGTTTTATAGATCCAA
CTTACGTACCGTGCCTGCGAAGTTTAACTCTTTT
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