EY659553

Overview
NameEY659553
Unique NameEY659553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659553_ssr744 microsatellite EY659553_ssr744:744..759. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr268 microsatellite EY659553_ssr268:268..285. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr17 microsatellite EY659553_ssr17:17..28. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr49 microsatellite EY659553_ssr49:49..60. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 46/157 (29.30%), Postives = 88/157 (56.05%), Query Frame = 1
Query:   82 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +D++++F++ D+NGDG +S++EL  V+  +    + EE   ++++  L  + F+   D  ++                        +   ++SDL +AF ++D++G+G I+++EL SV+  LG  ++ S QDC+ MI   D + DG ++F+EFK MM
Sbjct:   16 DDIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDL-DEFVALFQIGIG--------------GGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLG--EKCSVQDCKKMISKVDIDGDGCVNFDEFKKMM 155          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.009e-14
Identity = 55/162 (33.95%), Postives = 78/162 (48.15%), Query Frame = 1
Query:   67 APLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            AP    +++R+F K D NGDG +S  EL  + E +G   T +EL  ++ +     D F+   +                          D +  EE  DL  AF VFD +G+G I++ EL  VL  LG  ++ + Q CR MI   D N DG++ FEEFK MM
Sbjct:   34 APTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDE----------------FAALNATASGDAAAVEE--DLRHAFRVFDADGNGTISAAELARVLHGLG--EKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   88 LQRIFEKLDRNGDGLVSLEELNWVLERIGVH-------FTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L+R+FE  DR+GDG+++  EL+  L R+G           L+ + A    P +    F  F                             ++ +E+ +D+ +AF VFD +GDG+I++ ELQ+VL+R+GL +       R MI   D +SDG +D+EEFK MM
Sbjct:   42 LRRVFEMFDRDGDGVITPAELSGALCRLGARGEAPPAAAALDAVVAAYIAPGMAGLRFAEF----------EALHAELAGLGGRQAVAAAEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEFKAMM 193          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML30_ORYSJ (Probable calcium-binding protein CML30 OS=Oryza sativa subsp. japonica GN=CML30 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 58/169 (34.32%), Postives = 79/169 (46.75%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFT-LEELEALVEKPSLCFD------EFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDS---GDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGL---WDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            DL  +F   D +GDG ++  EL   L+R+G+  +   E  ALV +     D      EF    DSI                         D     +EE  DL +AF VFD N DG I++EEL +VL  LGL       +  +CR MI + D++ DG++ FEEFK MM
Sbjct:   63 DLGIVFSTFDHDGDGFITAAELEESLKRLGIAVSSAAEAAALVARVDANSDGLIDIHEFRELYDSIPKRRKSHQQHPLPSTAAADEEAAAADEEYEAEEEERDLREAFDVFDGNKDGLISAEELGTVLESLGLRQHGGRPAVAECRDMIRLVDSDGDGMVSFEEFKRMM 231          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML1_ARATH (Calmodulin-like protein 1 OS=Arabidopsis thaliana GN=CML1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 49/164 (29.88%), Postives = 81/164 (49.39%), Query Frame = 1
Query:   76 TANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMMLRSTV 567
            + N+++R+F + D + DG +S  E   VL  +G    +E++  + +   L  D F+ F + I +                        SG    SD+  +F  FD+NGDG I++EE+ SVL +LG  +  S +DC  M+   D + DG+++ EEF  MM  + V
Sbjct:   47 SVNEMRRVFSRFDLDKDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKR---------------------SGGIRSSDIRNSFWTFDLNGDGKISAEEVMSVLWKLG--ERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSSNNV 187          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.726e-12
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMMLRSTV 567
            +L+++F++ D NGDG +S+ EL  V + +G  +T  EL  ++E+        +  DEF   C S                           S   EI D   AF ++D + +G I++ EL  VL RLG+    S +DC  MI   D + DG ++FEEF+ MM  S++
Sbjct:   23 ELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFSTLCRS--------------------------SSSAAEIRD---AFDLYDQDKNGLISASELHQVLNRLGM--SCSVEDCTRMIGPVDADGDGNVNFEEFQKMMTSSSL 158          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.255e-12
Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L  N+L+ +F+ +D N DG +S EEL   +  +G   +  E+E +V+   +  D F+ F + +                       +D S +E   +L +AF ++ + G+ FIT+  L+  L+RLG  +  +   C+ MI  +D N DGVL F+EF  MM
Sbjct:   45 LNVNELRTVFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFL------------------KLMEGEDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLG--ESCTVDACKVMIRGFDQNDDGVLSFDEFVLMM 184          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.945e-12
Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   82 NDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            N++Q +F + D NGDG +S +EL  VL+ +G + + EE+  ++E+     D F+   +                            SG E  ++L +AF ++D + +G I+S EL  +L RLG  +  +  DC  MI   D++ DG + FEEFK MM
Sbjct:   19 NEVQGVFNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYP--------------SSGGE--NELKEAFELYDQDHNGLISSVELHKILTRLG--ERYAEHDCVEMIKSVDSDGDGYVSFEEFKKMM 157          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CALM4_MOUSE (Calmodulin-4 OS=Mus musculus GN=Calm4 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 46/169 (27.22%), Postives = 79/169 (46.75%), Query Frame = 1
Query:   52 LTHNMAPLTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEK------PSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEF 540
            ++H        + Q  F + D+N DG +S+EEL  V++++G +   ++L+AL+ K        + F+EFL                            ++         +L   F+V D NGDG+IT +EL+  L++LG  +  S ++   MI V D + DG + +EEF
Sbjct:    1 MSHGFTKEEVAEFQAAFNRFDKNKDGHISVEELGDVMKQLGKNLPEKDLKALISKLDTDGDGKISFEEFL--------------------------TAIEKYKKGHRAGELRAVFNVLDQNGDGYITVDELKESLSKLG--ESLSQEELEDMIRVADVDQDGKVKYEEF 141          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 47/156 (30.13%), Postives = 78/156 (50.00%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +L+++F + D NGDG +S EEL  VL  +G      E+  ++++     D F+      +S                     D ++  E  ++L +AF ++D + +G I++ EL  VL +LG  D+ S  DC  MI   D + DG ++F+EFK MM
Sbjct:    5 ELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFV-----DLSEFAAFHCGPTPAHGGKGGDAKDQEAASE--AELREAFRMYDADSNGKISARELHRVLRQLG--DKCSVADCSRMIRSVDADGDGCVNFDEFKKMM 151          
The following BLAST results are available for this feature:
BLAST of EY659553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CML24_ARATH2.409e-1429.30Calcium-binding protein CML24 OS=Arabidopsis thali... [more]
CML10_ORYSJ7.009e-1433.95Probable calcium-binding protein CML10 OS=Oryza sa... [more]
CML21_ORYSJ9.154e-1432.10Probable calcium-binding protein CML21 OS=Oryza sa... [more]
CML30_ORYSJ2.663e-1334.32Probable calcium-binding protein CML30 OS=Oryza sa... [more]
CML1_ARATH2.663e-1329.88Calmodulin-like protein 1 OS=Arabidopsis thaliana ... [more]
CML27_ARATH1.726e-1231.14Probable calcium-binding protein CML27 OS=Arabidop... [more]
CML37_ARATH2.255e-1230.00Calcium-binding protein CML37 OS=Arabidopsis thali... [more]
ALL8_OLEEU2.945e-1231.21Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
CALM4_MOUSE1.119e-1127.22Calmodulin-4 OS=Mus musculus GN=Calm4 PE=2 SV=2[more]
CML18_ORYSJ1.909e-1130.13Probable calcium-binding protein CML18 OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659553 ID=EY659553; Name=EY659553; organism=Citrus sinensis; type=EST; length=884bp
ATTGTTTTTCTGGATTGTTAGTTAGTTAATCCCCATTATATATTATTGTC
ACTCACTCACAATATGGCTCCTCTTACCGCCAATGACTTGCAAAGAATTT
TCGAGAAGCTTGATCGAAATGGCGATGGCCTGGTGAGCTTGGAGGAACTC
AACTGGGTTCTTGAAAGAATTGGGGTACATTTTACCCTTGAAGAGCTTGA
AGCCCTAGTTGAAAAACCAAGCCTCTGCTTCGATGAATTCTTGTTCTTCT
GTGATTCCATCATATCGAATAATAATAATAATAATCCCAATGCTGCTGCT
GATGCTTCCCAGAATGCTGATGAAGCAGTTGATGATGACAGCGGCGACGA
AGAGATCAGTGATCTTTACAAAGCGTTCAGTGTGTTCGATGTGAATGGTG
ATGGATTCATTACAAGCGAAGAGCTTCAGAGTGTGTTGGCGAGACTCGGA
TTGTGGGATGAAAAAAGCAGCCAAGATTGCAGAAGCATGATTTACGTGTA
TGATACCAATTCTGATGGGGTTCTTGATTTTGAAGAATTCAAGAACATGA
TGCTTCGTAGTACTGTTTCTTAATTCGTTTATTAATTTCGCGCCTGTTAA
TCTTGACCTTGTTTTTTTTTTTTTTTTTTTATAATCTGTGAAATTATGTT
GATTATATGATGGTCGTAATTTGTTAGACCCGAGATCAACATAATTAGCC
GAGCTTATTAGATTATTTNGTGGTTCGTGTAATCTTATATATATGTGTGT
GTGTGTGTGTACGTATGATCCTTCAAATATGCGTTTCCTTGTGTAAAAAA
AAAAAAACCTATCATAANATCCATATCGGCGCGCCGTTTTATAGATCCAA
CTTACGTACCGTGCCTGCGAAGTTTAACTCTTTT
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