EY659551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.425e-43 Identity = 86/116 (74.14%), Postives = 94/116 (81.03%), Query Frame = 2 Query: 485 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANNAWAYATNFCPGK 832 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG +ENL DHIADPV NNAWA+ATNF PGK Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.425e-43 Identity = 86/116 (74.14%), Postives = 94/116 (81.03%), Query Frame = 2 Query: 485 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANNAWAYATNFCPGK 832 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG +ENL DHIADPV NNAWA+ATNF PGK Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.473e-43 Identity = 85/116 (73.28%), Postives = 94/116 (81.03%), Query Frame = 2 Query: 485 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANNAWAYATNFCPGK 832 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG +ENL DH+ADPV NNAW+YATNF PGK Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.842e-43 Identity = 85/116 (73.28%), Postives = 94/116 (81.03%), Query Frame = 2 Query: 485 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANNAWAYATNFCPGK 832 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG +ENL DH+ADPV NNAWA+ATNF PGK Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.842e-43 Identity = 85/116 (73.28%), Postives = 94/116 (81.03%), Query Frame = 2 Query: 485 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANNAWAYATNFCPGK 832 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG +ENL DH+ADPV NNAWA+ATNF PGK Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.700e-42 Identity = 86/124 (69.35%), Postives = 96/124 (77.42%), Query Frame = 2 Query: 464 LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXX-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANNAWAYATNFCPGK 832 LDYLGNP+L+HAQSILAIWA QV+LMG VEGYR+ +FDPL DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG +ENL DH+ADPV NNAWA+ATNF PGK Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.065e-28 Identity = 103/284 (36.27%), Postives = 137/284 (48.24%), Query Frame = 2 Query: 38 MATSAIQQSA---FAGQTALRQS---NEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR-----------------IXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADPVANN 796 MAT A+ S+ FA + A+RQS VG + G + T P G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE L K G+ E WF+ G I G +Y + ++ ++ LMGF E R + F+PLG D ELK+KE+KNGRLAM ++ G+F+Q +VTG G +NL DH+ADPV NN Sbjct: 1 MATQALVSSSSLTFAAE-AVRQSFRARSLPSSVGCSRKGLVRAAAT----PPVKQGGVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.017e-27 Identity = 87/249 (34.94%), Postives = 121/249 (48.59%), Query Frame = 2 Query: 59 QSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADP 784 +++F G LR S +F+ VG R+V A ++ PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G PE L+K GV W+ AG Q + + L + +L WA ++ G V I FDPLG P + EL+ KE+KNGRLAM ++ G + Q I TG G I+NL+ H+ADP Sbjct: 31 KASFLGGKRLRVS-KFIAPVG---------SRSV--AVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQEY------FTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.635e-27 Identity = 86/262 (32.82%), Postives = 126/262 (48.09%), Query Frame = 2 Query: 41 ATSAIQQSAFAGQTALRQSNEF-VRKVGVADGGRITMRR-----TVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGSIENLYDHIADP 784 A+S I AF+ ++ R + K G R+ + + T +SA + PDRP + P +L G PGD+G+D GL++DPE+ N++ E++H RWAMLGA G PE+L+K G+ W+ AG Q + + L + +L WA ++ G V I FDPLG P + EL+ KE+KNGRLAM ++ G + Q I TG G I+NL+ H+ADP Sbjct: 6 ASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY659551 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.635e-27 Identity = 78/190 (41.05%), Postives = 100/190 (52.63%), Query Frame = 2 Query: 233 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGSIENLYDHIADPVANN 796 PSYL G PGD+G+D+ GL P + +E E+IH RWAML G + PE L G W KA GG YLG P + ++ I A + + + FVE R AFDPLG + DP +F ELKVKE+KNGRLA+ ++ GF V Q+ G G +ENL H+ADP NN Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL-------GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR---SMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233 The following BLAST results are available for this feature:
BLAST of EY659551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659551 ID=EY659551; Name=EY659551; organism=Citrus sinensis; type=EST; length=916bpback to top |