EY659539

Overview
NameEY659539
Unique NameEY659539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_BACSU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.794e-32
Identity = 72/179 (40.22%), Postives = 107/179 (59.78%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVF-KDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E  GI+V+E  EHA+ RGA I  E +G   T DA+H+T P  DG G +  +  +++DAG++PEE++Y+NAH TST   D  E  AIK VF +   ++ ++ TKSM           EAI +I AI  G + PT+N    + E  +D VP+  ++  +N  +SNS GFGGHN+ ++F  +
Sbjct:  233 EGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEIDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILAIKEGVIPPTINIQTPDEECDLDYVPDEARRQELNYVLSNSLGFGGHNATLIFKKY 411          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_VIBCH (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae GN=fabF PE=3 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 1.387e-31
Identity = 74/175 (42.29%), Postives = 107/175 (61.14%), Query Frame = 3
Query:   12 GILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD--TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNV-KKQHHVNVAISNSFGFGGHNSVVVF 527
            GI+V+E  EHA  RGA I AE +G  ++ DA+HMT P  DG G +  +  ++ DAGV+ E++ YVNAH TST AGD+AEV  IK+   +  T ++ ++ TKSM           EAI T+ ++    + PT+N DN E  + +D VP+V +K   +  A+ NSFGFGG N  ++F
Sbjct:  237 GIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIF 411          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 3.090e-31
Identity = 75/180 (41.67%), Postives = 109/180 (60.56%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDT-SEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 539
            E  GI+V+E  EHA  RGA I AE +G  ++ DA H+T P  DG G   C+  +L+ AGV+  +++Y+NAH TST+A D  E+ A++++  D+ S + M+ TKS I          EAI +  AI      PTLN DN   E  ID VP+V ++  +NVA+SNSFGFGG N+ ++   ++
Sbjct:  241 EGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRAGVTAADIDYINAHGTSTMA-DTIELGAVERLVGDSASRISMSSTKSAIGHLLGAAGAVEAIFSALAIRDNIAPPTLNLDNPSVETKIDLVPHVARKREINVALSNSFGFGGTNASLILRRYT 419          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_COXBU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii GN=fabF PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.035e-31
Identity = 71/177 (40.11%), Postives = 104/177 (58.76%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFA 530
            E    +V+E  EHA KR A I AE +G  ++ DA+HMT P  +  G ++C+ NSL DAG++PE V+Y+NAH TST A D  E  AIKK F D + ++ ++ TKSM           E + ++ AI      PT+N +N +    +D VPN  ++  ++  +SNSFGFGG N  +V +
Sbjct:  234 EGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAGALETVISVLAIRDNTAPPTINLENPDEGCDLDFVPNEAREMKIDTVMSNSFGFGGTNGTLVLS 410          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_SHIFL (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shigella flexneri GN=fabF PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.003e-30
Identity = 72/174 (41.38%), Postives = 104/174 (59.77%), Query Frame = 3
Query:   12 GILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ-HHVNVAISNSFGFGGHNSVVVF 527
            G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +AN+L DAG+   ++ YVNAH TST AGD AE  A+K +F +  S + ++ TKSM           E+I +I A+    + PT+N DN +    +D VP+  +Q   +   + NSFGFGG N  ++F
Sbjct:  237 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_ECOLI (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli (strain K12) GN=fabF PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.003e-30
Identity = 72/174 (41.38%), Postives = 104/174 (59.77%), Query Frame = 3
Query:   12 GILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ-HHVNVAISNSFGFGGHNSVVVF 527
            G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +AN+L DAG+   ++ YVNAH TST AGD AE  A+K +F +  S + ++ TKSM           E+I +I A+    + PT+N DN +    +D VP+  +Q   +   + NSFGFGG N  ++F
Sbjct:  237 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_ECOL6 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O6 GN=fabF PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.003e-30
Identity = 72/174 (41.38%), Postives = 104/174 (59.77%), Query Frame = 3
Query:   12 GILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ-HHVNVAISNSFGFGGHNSVVVF 527
            G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +AN+L DAG+   ++ YVNAH TST AGD AE  A+K +F +  S + ++ TKSM           E+I +I A+    + PT+N DN +    +D VP+  +Q   +   + NSFGFGG N  ++F
Sbjct:  237 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_ECO57 (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Escherichia coli O157:H7 GN=fabF PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.003e-30
Identity = 72/174 (41.38%), Postives = 104/174 (59.77%), Query Frame = 3
Query:   12 GILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQ-HHVNVAISNSFGFGGHNSVVVF 527
            G+LV+E  EHA KRGA I AE +G  ++ DA+HMT P  +G G +  +AN+L DAG+   ++ YVNAH TST AGD AE  A+K +F +  S + ++ TKSM           E+I +I A+    + PT+N DN +    +D VP+  +Q   +   + NSFGFGG N  ++F
Sbjct:  237 GMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 410          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: OXSM_MOUSE (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.214e-29
Identity = 75/180 (41.67%), Postives = 105/180 (58.33%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVN---VAISNSFGFGGHNSVVVFA 530
            E   +LV+E  EHA++RGA I AE LG  ++ DA H+T P  +G G   C+A +++DAGVSPE+++YVNAHATST  GD AE  AIK++F+D    + ++ TK             EA  T  A     L PTLN D  EPE  ++ VP   ++       + ++NSFGFGG N+ +  A
Sbjct:  278 EGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAGVSPEQISYVNAHATSTPLGDAAENRAIKRLFRDHACALAISSTKGATGHLLGAAGAVEATFTALACYHQKLPPTLNLDCTEPEFDLNYVPLESQEWKAEGRCIGLTNSFGFGGTNATLCIA 457          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABF_VIBHA (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.214e-29
Identity = 68/174 (39.08%), Postives = 104/174 (59.77%), Query Frame = 3
Query:   12 GILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVF--KDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            G++V+E  EHA  RGA I AE +G  ++ DA+HMT P  DG G +  +  ++ DA ++  +V YVNAH TST AGD+AE+  +K+    + + ++ ++ TKSM           EAI T+ ++    + PT+N D+ E  + ID VP+  ++  +  AI NSFGFGG N  +VF
Sbjct:  237 GVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGTQVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITVLSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVDMEYAICNSFGFGGTNGSLVF 410          
The following BLAST results are available for this feature:
BLAST of EY659539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
FABF_BACSU2.794e-3240.223-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bac... [more]
FABF_VIBCH1.387e-3142.293-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]
FABF_RHIME3.090e-3141.673-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhi... [more]
FABF_COXBU4.035e-3140.113-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Cox... [more]
FABF_SHIFL2.003e-3041.383-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Shi... [more]
FABF_ECOLI2.003e-3041.383-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECOL62.003e-3041.383-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
FABF_ECO572.003e-3041.383-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Esc... [more]
OXSM_MOUSE2.214e-2941.673-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FABF_VIBHA2.214e-2939.083-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vib... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659539 ID=EY659539; Name=EY659539; organism=Citrus sinensis; type=EST; length=939bp
GAGAGGTTTGTGGCATACTGGTTATGGAGAGCTCGGAGCATGCAATGAAA
AGAGGAGCTAACATAATTGCCGAGTATCTGGGAGGTGCGGTAACCTGTGA
TGCTCATCACATGACAGATCCAAGGTCAGATGGCCTCGGAGTTTCATCTT
GCATAGCCAATAGTTTAGAAGATGCAGGAGTTTCCCCTGAAGAGGTTAAC
TACGTGAATGCTCATGCAACATCCACATTAGCAGGGGATTTGGCTGAGGT
TAATGCAATTAAGAAGGTCTTCAAGGACACATCTGAAATGAAGATGAATG
GAACTAAGTCGATGATTGGACATGGGCTTGGGGCAGCTGGCGGATTGGAA
GCTATAACAACCATAAAAGCAATCACCACTGGCTGGTTGCATCCAACCCT
TAACCAAGATAACTTGGAGCCTGAGGTTACAATCGACACCGTTCCAAATG
TGAAGAAACAGCATCACGTTAACGTTGCTATCTCAAATTCATTTGGCTTT
GGTGGTCACAACTCTGTGGTGGTTTTTGCTCCCTTCTCACATAAATAAAC
TGTGGGCCAAAGAATTTCTCTATTTCAACCATTCCTTTAACAGAAAATTA
ATCATTGATTTGAGGCCTTAATTAACATTGCTTNAAAGCATGGGACGTAT
AAAGTGATGAAGAAATCATTAATGCTCTGACGAGTGATGAAGTCACAGTA
GCTTCTTTTGGCAATTCATTNCATCCATCACCATGCTCGAGTGAGGGCAC
ATTCTCTGGTGTTTCGATTTGAATAAATAACACTCATGTAACTNNCCCTA
TGTGGTCCTGGTTCGCCTGGATTCTAATTTCCACCCTAAAATAAATATTG
GGGCTTATTTTTGATGGGTAGATAACAAGGTTAAAGATGCCGCCTCAATA
AATCCAACCTGGTCCTGACCTAAAAAAAAAAAAAAAAAA
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