EY659539

Overview
NameEY659539
Unique NameEY659539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: OXSM_BOVIN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.874e-28
Identity = 73/180 (40.56%), Postives = 103/180 (57.22%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP---NVKKQHHVNVAISNSFGFGGHNSVVVFA 530
            E   +LV+E   HA++RGA + AE +G  ++ DA H+T P   G G   C+A +++DAG+ PEEV+Y+NAHATST  GD AE  AIK++FKD +  + ++ TK             EA  T  A     L PTLN D  EP   ++ VP      K  +  +A++NSFGFGG N+ +  A
Sbjct:  279 EGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAAAVKDAGIQPEEVSYINAHATSTPLGDAAENKAIKQLFKDHAHVLAVSSTKGATGHLLGTAGAAEAAFTALACYHRKLPPTLNLDCTEPHFDLNYVPLKAQEWKAENRRIALTNSFGFGGTNATLCIA 458          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: OXSM_HUMAN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.197e-28
Identity = 75/180 (41.67%), Postives = 103/180 (57.22%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVN---VAISNSFGFGGHNSVVVFA 530
            E   +LV+E  EHA++R A I AE LG  ++ DA H+T P  +G G   C+A +L+DAGV PEE++Y+NAHATST  GD AE  AIK +FKD +  + ++ TK             EA  T  A     L PTLN D  EPE  ++ VP   ++       + ++NSFGFGG N+ +  A
Sbjct:  278 EGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIA 457          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FAB1_MYCTU (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium tuberculosis GN=kasA PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.123e-28
Identity = 64/178 (35.96%), Postives = 98/178 (55.06%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E   ++++E+ EHA  RGA  +A  LG  +T DA HM  P +DG+     +  SLE AG+SP ++++VNAH T+T  GD AE NAI+    D  +  +   KS +          E++ T+  +  G + PTLN +  +PE+ +D V    +      A++NSFGFGGHN  + F  +
Sbjct:  241 EAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGRY 416          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FAB1_MYCBO (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium bovis GN=kasA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.123e-28
Identity = 64/178 (35.96%), Postives = 98/178 (55.06%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E   ++++E+ EHA  RGA  +A  LG  +T DA HM  P +DG+     +  SLE AG+SP ++++VNAH T+T  GD AE NAI+    D  +  +   KS +          E++ T+  +  G + PTLN +  +PE+ +D V    +      A++NSFGFGGHN  + F  +
Sbjct:  241 EAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGRY 416          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: NOE4_RHIME (Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.707e-27
Identity = 71/176 (40.34%), Postives = 98/176 (55.68%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E  G+ V+ES EHA  RGA I+AE  G  ++ DA H+T P   G    S +   L DAG++ E+V+Y+NAH T T A D  E  AIK+VF D +  M ++ TKS            E I  + AI  G + PT N    +P+  +D  PNV ++  V VA+SN+F  GG N+V+ F
Sbjct:  225 EGAGMAVLESYEHATARGATILAEVAGVGLSADAFHITAPAVHG--PESAMRACLADAGLNAEDVDYLNAHGTGTKANDQNETTAIKRVFGDHAYSMSISSTKSTHAHCIGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVPRERKVRVAMSNAFAMGGTNAVLAF 398          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: NODE_RHIME (Nodulation protein E OS=Rhizobium meliloti GN=nodE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.707e-27
Identity = 71/176 (40.34%), Postives = 98/176 (55.68%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E  G+ V+ES EHA  RGA I+AE  G  ++ DA H+T P   G    S +   L DAG++ E+V+Y+NAH T T A D  E  AIK+VF D +  M ++ TKS            E I  + AI  G + PT N    +P+  +D  PNV ++  V VA+SN+F  GG N+V+ F
Sbjct:  226 EGAGMAVLESYEHATARGATILAEVAGVGLSADAFHITAPAVHG--PESAMRACLADAGLNAEDVDYLNAHGTGTKANDQNETTAIKRVFGDHAYSMSISSTKSTHAHCIGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVPRERKVRVAMSNAFAMGGTNAVLAF 399          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FAB1_MYCLE (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Mycobacterium leprae GN=kasA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.535e-27
Identity = 65/178 (36.52%), Postives = 97/178 (54.49%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            E   ++++E+ EHA  RGA  +A  LG  +T DA HM  P +DG+     +  SLE AG+S ++V++VNAH T+T  GD AE NAI+       +  +   KS +          E++ T+ A+  G + PTLN    +PE+ +D V    +      AI+NSFGFGGHN  + F  +
Sbjct:  241 EAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSAKDVDHVNAHGTATPIGDSAEANAIR--VAGCEQAAVYAPKSALGHSIGAVGALESVLTVLALRDGVIPPTLNYQTPDPEIDLDIVAGEPRYGDYRYAINNSFGFGGHNVALAFGRY 416          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FAB2_MYCTU (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium tuberculosis GN=kasB PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.617e-27
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3
Query:   15 ILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            +L++E+ EHA  RGANI+A  +G ++T D  HM  P  +G      I  +++ AG++P ++++VNAHAT T  GDLAE  AI       +   +   KS +          E+I T+ A+    + PTLN  NL+PE+ +D V    +  +   AI+NSFGFGGHN  + F  +
Sbjct:  245 LLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNAL-GGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGRY 417          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FAB2_MYCBO (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium bovis GN=kasB PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.617e-27
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 3
Query:   15 ILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            +L++E+ EHA  RGANI+A  +G ++T D  HM  P  +G      I  +++ AG++P ++++VNAHAT T  GDLAE  AI       +   +   KS +          E+I T+ A+    + PTLN  NL+PE+ +D V    +  +   AI+NSFGFGGHN  + F  +
Sbjct:  245 LLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNAL-GGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGRY 417          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.875e-27
Identity = 72/180 (40.00%), Postives = 98/180 (54.44%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD---TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVP-NVKKQHHVNVAISNSFGFGGHNSVVVFA 530
            E  G++V+E  EHA +RGA I AE  G  ++ DAHH+T P  DG G    +  +L  +G+ P +++YVNAHATST  GD  E  AIK VF +   +  +  + TK             EAI +I AI  G    TLN  N +P      +P    K+  V  A+SNSFGFGG N+ ++FA
Sbjct:  280 EGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 459          
The following BLAST results are available for this feature:
BLAST of EY659539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
OXSM_BOVIN1.874e-2840.563-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
OXSM_HUMAN3.197e-2841.673-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FAB1_MYCTU7.123e-2835.963-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
FAB1_MYCBO7.123e-2835.963-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
NOE4_RHIME2.707e-2740.34Nodulation protein E OS=Rhizobium meliloti GN=nodE... [more]
NODE_RHIME2.707e-2740.34Nodulation protein E OS=Rhizobium meliloti GN=nodE... [more]
FAB1_MYCLE3.535e-2736.523-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Myc... [more]
FAB2_MYCTU4.617e-2736.783-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Myc... [more]
FAB2_MYCBO4.617e-2736.783-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Myc... [more]
KASM_ARATH7.875e-2740.003-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659539 ID=EY659539; Name=EY659539; organism=Citrus sinensis; type=EST; length=939bp
GAGAGGTTTGTGGCATACTGGTTATGGAGAGCTCGGAGCATGCAATGAAA
AGAGGAGCTAACATAATTGCCGAGTATCTGGGAGGTGCGGTAACCTGTGA
TGCTCATCACATGACAGATCCAAGGTCAGATGGCCTCGGAGTTTCATCTT
GCATAGCCAATAGTTTAGAAGATGCAGGAGTTTCCCCTGAAGAGGTTAAC
TACGTGAATGCTCATGCAACATCCACATTAGCAGGGGATTTGGCTGAGGT
TAATGCAATTAAGAAGGTCTTCAAGGACACATCTGAAATGAAGATGAATG
GAACTAAGTCGATGATTGGACATGGGCTTGGGGCAGCTGGCGGATTGGAA
GCTATAACAACCATAAAAGCAATCACCACTGGCTGGTTGCATCCAACCCT
TAACCAAGATAACTTGGAGCCTGAGGTTACAATCGACACCGTTCCAAATG
TGAAGAAACAGCATCACGTTAACGTTGCTATCTCAAATTCATTTGGCTTT
GGTGGTCACAACTCTGTGGTGGTTTTTGCTCCCTTCTCACATAAATAAAC
TGTGGGCCAAAGAATTTCTCTATTTCAACCATTCCTTTAACAGAAAATTA
ATCATTGATTTGAGGCCTTAATTAACATTGCTTNAAAGCATGGGACGTAT
AAAGTGATGAAGAAATCATTAATGCTCTGACGAGTGATGAAGTCACAGTA
GCTTCTTTTGGCAATTCATTNCATCCATCACCATGCTCGAGTGAGGGCAC
ATTCTCTGGTGTTTCGATTTGAATAAATAACACTCATGTAACTNNCCCTA
TGTGGTCCTGGTTCGCCTGGATTCTAATTTCCACCCTAAAATAAATATTG
GGGCTTATTTTTGATGGGTAGATAACAAGGTTAAAGATGCCGCCTCAATA
AATCCAACCTGGTCCTGACCTAAAAAAAAAAAAAAAAAA
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