EY659539

Overview
NameEY659539
Unique NameEY659539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: OXSM_SCHPO (Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC887.13c PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.291e-26
Identity = 67/179 (37.43%), Postives = 101/179 (56.42%), Query Frame = 3
Query:   18 LVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE----MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLN--QDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPF 536
            LV+E  EHA  R A+I AE +G  +  D++H+T P  +G      +  SL+ AG+S  +++Y+NAHATST  GD+AE  AI ++  D +       ++ +K  I          E++ T+  +  G L PTLN    ++  +   D VPNV K+  +NVA+SNSFGFGG N+ + F  F
Sbjct:  246 LVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKRSLKQAGLSASQLDYINAHATSTKLGDVAESIAITRLLCDVNRNPEAFPVSSSKGSIGHLLGAAGAIESVYTVLTVQKGVLPPTLNFEYSDIPQQFQCDYVPNVAKESRINVALSNSFGFGGTNASLCFKKF 424          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: NODE_RHIS3 (Nodulation protein E OS=Rhizobium sp. (strain N33) GN=nodE PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.667e-26
Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDG--LGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKD-TSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E  G+ V+ES EHA  RGA IIAE  G  ++ DA ++  P  +G    + +C+A    DAG++ ++V+Y+NAH T T A D  E  AIK+VF    + M ++ TKSM           E I  + AI  G + PT N    +P+  +D  PNV ++  V VA+SN+F   G N+V+ F
Sbjct:  226 EGAGMAVLESYEHATARGATIIAEIAGIGLSADAFNLVSPAVEGPEAAMRACLA----DAGLNVQDVDYINAHGTGTKANDRMETEAIKRVFGGHANSMSISSTKSMHAHCLGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVARERKVRVALSNAFAMAGMNAVLAF 399          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FAB2_MYCLE (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Mycobacterium leprae GN=kasB PE=3 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 6.667e-26
Identity = 62/175 (35.43%), Postives = 96/175 (54.86%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E   ++++E+ + A  R ANI+A  +G ++T D  HM  P  +G      IA ++  AG+SP ++++VNAHAT T  GDLAE  AI K   + +   +   KS +          E+I T+ A+    + PTLN  NL+P++ +D V    +      A++NSFGFGGHN  + F
Sbjct:  244 EAGALMLIETEDSAKARSANILARIMGASITSDGFHMVAPDPNGERAGHAIARAVHLAGLSPSDIDHVNAHATGTQVGDLAEAKAINKALCN-NRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPDIDLDVVAGKPRPGDYRYAVNNSFGFGGHNVAIAF 417          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: NODE_RHILV (Nodulation protein E OS=Rhizobium leguminosarum bv. viciae GN=nodE PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.485e-25
Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSE-MKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E  G+ V+ES EHA  RGA ++AE  G  ++ DA+H+  P   G    + +   L DA ++ E+V+Y+NAH T T A D  E  AIK+VF D +  M ++ TKS            E I  + AI  G + PT N    +P+  +D  PNV ++  V VA+SN+F  GG N+V+ F
Sbjct:  226 EGAGMAVLESYEHAAARGATMLAEVAGIGLSADAYHIAAPAVHG--PEAAMRACLVDASLNAEDVDYLNAHGTGTKANDQIETTAIKRVFGDHARSMSISSTKSTHAHCLGAASALEMIACVMAIQEGVVPPTANYREPDPDCDLDVTPNVPRERKVRVAMSNAFAMGGMNAVLAF 399          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: NODE_RHILT (Nodulation protein E OS=Rhizobium leguminosarum bv. trifolii GN=nodE PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.064e-23
Identity = 66/178 (37.08%), Postives = 101/178 (56.74%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDG--LGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVF 527
            E  G+ V+ES EHA  RGA ++AE  G  ++ DA+ +  P  +G    + SC+A    DA ++P++V+Y+NAH T T+A D  E  AIK+VF D + +M ++ TKSM           E I  + AI  G + PT N    +P+  +D  PNV ++     ++SN+F  GG N+V+ F
Sbjct:  226 EGAGMAVLESYEHAAARGATMLAEVAGIGLSGDAYDIVMPSIEGPEAAMRSCLA----DAELNPDDVDYLNAHGTGTVANDEMETAAIKRVFGDHAFQMSVSSTKSMHAHCLGAASALEMIACVMAIQEGVIPPTANYREPDPQCDLDVTPNVPREQRCG-SMSNAFAMGGTNAVLAF 398          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: CEM1_YEAST (3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces cerevisiae GN=CEM1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.899e-23
Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVF----KDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHV----------NVAISNSFGFGGHNSVVVF 527
            E CG++VMES EHA KR ANII+E +G  ++ DA H+T P +DG G    I  +L+ A + P +V+YVNAHATSTL GD AE  A+          +  + ++  K  I          E+I TI ++    +  TLN DN+   +T++      K H +            A+ NSFGFGG N+ ++F
Sbjct:  252 EGCGMIVMESLEHAQKRNANIISELVGYGLSSDACHITSPPADGNGAKRAIEMALKMARLEPTDVDYVNAHATSTLLGDKAECLAVASALLPGRSKSKPLYISSNKGAIGHLLGAAGAVESIFTICSLKDDKMPHTLNLDNV---LTLEN-NEADKLHFIRDKPIVGANPKYALCNSFGFGGVNTSLLF 436          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: KAS1_STRRM (Oxytetracycline polyketide putative beta-ketoacyl synthase 1 OS=Streptomyces rimosus PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.879e-20
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKK-VFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 524
            E     V+E   HA +RGA   AE  G A  C+A+ MT  RSDG  ++  ++ +L+ A V P EV+YVNAH ++T   DL E  A K+ +      + ++  KSMI          E   +   I  G + PT N    +P+  +D VP V ++  V+  +S + GFGG  S +V
Sbjct:  243 EGAAFFVLEEYAHARRRGARAYAEIAGYAGRCNAYSMTGLRSDGRELAEAVSRALDIARVDPSEVDYVNAHGSATKQNDLHETAAFKRSLGPHAYSVPISSIKSMIGHSLGAICALEVAASALRIEHGVIPPTANLREPDPDCDLDYVPLVAREAEVSTVVSVASGFGGFQSAIV 417          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: KAS1_STRCN (Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces cyaneus GN=curA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.324e-20
Identity = 57/175 (32.57%), Postives = 89/175 (50.86%), Query Frame = 3
Query:    3 EVCGILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKK-VFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 524
            E   +LV+E  EHA  RGA++  E  G A   +A+HMT   S+GL ++  I  +L+ A V P +++YVNAH + T   D  E  A+KK +     +  M+  KSM+          E +  + A+    + PT N +  +PE  +D VP   +   ++  +S   GFGG  S V+
Sbjct:  239 EGAAVLVLEELEHARARGAHVYCEIGGYATFGNAYHMTGLTSEGLEMARAIDVALDHARVDPTDIDYVNAHGSGTRQNDRHETAAVKKSLGAHAYDTPMSSIKSMVGHSLGAIGAIEVVACVLALARQVVPPTANYETPDPECDLDYVPRTARPRRLDHVLSVGSGFGGFQSAVL 413          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: FABB_HAEIN (3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus influenzae GN=fabB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.044e-19
Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 3
Query:   15 ILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSEMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNL-EPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVVFAPFS 539
            ++V+E  EHA+ RGA I AE +G   T D + M  P   G G   C+  ++         ++Y+N H TST  GD+ E+ AIK VF D     ++ TKSM           EAI T+  +   ++ P++N + L E     + V   K+   +   +SNSFGFGG N+ ++F  ++
Sbjct:  236 VVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAERCMKQAMATVDT---PIDYINVHGTSTPVGDVKELGAIKNVFGDKIP-AISSTKSMTGHSLGAAGAHEAIYTLLMLDNDFIAPSINIETLDEAAEGCNIVTETKENAGLQTVMSNSFGFGGTNATLIFKRYN 405          
BLAST of EY659539 vs. ExPASy Swiss-Prot
Match: KAS1_STRHA (Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces halstedii GN=sch1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.894e-19
Identity = 54/171 (31.58%), Postives = 86/171 (50.29%), Query Frame = 3
Query:   15 ILVMESSEHAMKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCIANSLEDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKKVFKDTS-EMKMNGTKSMIXXXXXXXXXXEAITTIKAITTGWLHPTLNQDNLEPEVTIDTVPNVKKQHHVNVAISNSFGFGGHNSVVV 524
            +LV+E  EHA  RGA++  E  G A   +AHHMT    +GL ++  I  +L+ A +   +++YVNAH + T   D  E  A+K+   + +    M+  KSM+          E +  + A+    + PT N +  +PE  +D VP   ++  +   +S   GFGG  S VV
Sbjct:  243 VLVLEELEHARARGADVYCELAGYATFGNAHHMTGLTREGLEMARAIDTALDMARLDGTDIDYVNAHGSGTQQNDRHETAAVKRSLGEHAYRTPMSSIKSMVGHSLGAIGSIEVVACVLALAHQVVPPTANYETPDPECDLDYVPREARERELRSVLSVGSGFGGFQSAVV 413          
The following BLAST results are available for this feature:
BLAST of EY659539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
OXSM_SCHPO2.291e-2637.43Putative 3-oxoacyl-[acyl-carrier-protein] synthase... [more]
NODE_RHIS36.667e-2638.20Nodulation protein E OS=Rhizobium sp. (strain N33)... [more]
FAB2_MYCLE6.667e-2635.433-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Myc... [more]
NODE_RHILV1.485e-2538.07Nodulation protein E OS=Rhizobium leguminosarum bv... [more]
NODE_RHILT1.064e-2337.08Nodulation protein E OS=Rhizobium leguminosarum bv... [more]
CEM1_YEAST6.899e-2337.043-oxoacyl-[acyl-carrier-protein] synthase homolog ... [more]
KAS1_STRRM1.879e-2034.29Oxytetracycline polyketide putative beta-ketoacyl ... [more]
KAS1_STRCN9.324e-2032.57Putative polyketide beta-ketoacyl synthase 1 OS=St... [more]
FABB_HAEIN6.044e-1932.953-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Hae... [more]
KAS1_STRHA7.894e-1931.58Putative polyketide beta-ketoacyl synthase 1 OS=St... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659539 ID=EY659539; Name=EY659539; organism=Citrus sinensis; type=EST; length=939bp
GAGAGGTTTGTGGCATACTGGTTATGGAGAGCTCGGAGCATGCAATGAAA
AGAGGAGCTAACATAATTGCCGAGTATCTGGGAGGTGCGGTAACCTGTGA
TGCTCATCACATGACAGATCCAAGGTCAGATGGCCTCGGAGTTTCATCTT
GCATAGCCAATAGTTTAGAAGATGCAGGAGTTTCCCCTGAAGAGGTTAAC
TACGTGAATGCTCATGCAACATCCACATTAGCAGGGGATTTGGCTGAGGT
TAATGCAATTAAGAAGGTCTTCAAGGACACATCTGAAATGAAGATGAATG
GAACTAAGTCGATGATTGGACATGGGCTTGGGGCAGCTGGCGGATTGGAA
GCTATAACAACCATAAAAGCAATCACCACTGGCTGGTTGCATCCAACCCT
TAACCAAGATAACTTGGAGCCTGAGGTTACAATCGACACCGTTCCAAATG
TGAAGAAACAGCATCACGTTAACGTTGCTATCTCAAATTCATTTGGCTTT
GGTGGTCACAACTCTGTGGTGGTTTTTGCTCCCTTCTCACATAAATAAAC
TGTGGGCCAAAGAATTTCTCTATTTCAACCATTCCTTTAACAGAAAATTA
ATCATTGATTTGAGGCCTTAATTAACATTGCTTNAAAGCATGGGACGTAT
AAAGTGATGAAGAAATCATTAATGCTCTGACGAGTGATGAAGTCACAGTA
GCTTCTTTTGGCAATTCATTNCATCCATCACCATGCTCGAGTGAGGGCAC
ATTCTCTGGTGTTTCGATTTGAATAAATAACACTCATGTAACTNNCCCTA
TGTGGTCCTGGTTCGCCTGGATTCTAATTTCCACCCTAAAATAAATATTG
GGGCTTATTTTTGATGGGTAGATAACAAGGTTAAAGATGCCGCCTCAATA
AATCCAACCTGGTCCTGACCTAAAAAAAAAAAAAAAAAA
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