EY659536 | Citrus Genome Database

Overview


Name	EY659536
Unique Name	EY659536
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	950

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_PONAB (Actin, cytoplasmic 1 OS=Pongo abelii GN=ACTB PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_PIG (Actin, cytoplasmic 1 OS=Sus scrofa GN=ACTB PE=2 SV=2)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_PANTR (Actin, cytoplasmic 1 OS=Pan troglodytes GN=ACTB PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_MOUSE (Actin, cytoplasmic 1 OS=Mus musculus GN=Actb PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_MESAU (Actin, cytoplasmic 1 OS=Mesocricetus auratus GN=ACTB PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_MACFA (Actin, cytoplasmic 1 OS=Macaca fascicularis GN=ACTB PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_HUMAN (Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_HORSE (Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=2 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_CRIGR (Actin, cytoplasmic 1 OS=Cricetulus griseus GN=ACTB PE=3 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_CHICK (Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1 SV=1)

HSP 1 Score: 374.785 bits (961), Expect = 1.955e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            D++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 1.955e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

The following BLAST results are available for this feature:

BLAST of EY659536 vs. ExPASy Swiss-Prot

BLAST of EY659536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 455


Match Name	E-value	Identity	Description
ACTB_PONAB	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Pongo abelii GN=ACTB PE=2 ...	[more]
ACTB_PIG	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Sus scrofa GN=ACTB PE=2 SV...	[more]
ACTB_PANTR	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Pan troglodytes GN=ACTB PE...	[more]
ACTB_MOUSE	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Mus musculus GN=Actb PE=1 ...	[more]
ACTB_MESAU	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Mesocricetus auratus GN=AC...	[more]
ACTB_MACFA	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Macaca fascicularis GN=ACT...	[more]
ACTB_HUMAN	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 ...	[more]
ACTB_HORSE	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=...	[more]
ACTB_CRIGR	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Cricetulus griseus GN=ACTB...	[more]
ACTB_CHICK	1.955e-106	87.20	Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-011-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659536 ID=EY659536; Name=EY659536; organism=Citrus sinensis; type=EST; length=950bp
CTCAAGTTTTGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTATCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGC
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGATAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAATAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCACGAGATGGTGTNTCCCACA
CAGTGCCAATCTATGAATGCTATGCCTTACCTCATGCTATNCTACGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGGTACAGTCTCACAGCCACAGCTGAAAGAGAACATCGCCGCGATA
TCATAGATAATTATGGTTTGTAGCTTTTTAACTTTGACAGGAAATGGNCA
CCGCTGCTTCCTCAAGCTCCCTAAAAAATCCTATGATTTGCCTGATGGTC
AAGGAATACAATTGAAACCAAAGGTTCCGTTGCCAAGAGCCCTATCCAAC
CTCATTCTTGGGTTTGGAACTGGGGGGGCCCTGGAACCCTCCCACCCATT
TTGAATATGGAGGTGTATTCGGAAAATTGGATGCCACACATCCCTCTTGA