EY659536 | Citrus Genome Database

Overview


Name	EY659536
Unique Name	EY659536
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	950

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7645	contig	Csv1_Contig7645:13..964.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB1_TAKRU (Actin, cytoplasmic 1 OS=Takifugu rubripes GN=actba PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.551e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            ++E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 EDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 2.551e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMGTAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTC_BRAFL (Actin, cytoplasmic OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 2.551e-106
Identity = 185/211 (87.68%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            +++V+ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.8834 bits (76), Expect = 2.551e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMSTAASSSSLE--------KSYELPDGQVITIGNERFRCPESLFQPSFLGMESTG 273

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTC_BRABE (Actin, cytoplasmic OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 2.551e-106
Identity = 185/211 (87.68%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            +++V+ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.8834 bits (76), Expect = 2.551e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPESLFQPSFLGMESTG 273

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT3_LIMPO (Actin-3 OS=Limulus polyphemus PE=1 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.984e-106
Identity = 192/227 (84.58%), Postives = 199/227 (87.67%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDIIDNYGL*LFNFDRK 744
            MCD+EV+ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI +       +FD++
Sbjct:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQE 227

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_STRPU (Actin, cytoskeletal 1B OS=Strongylocentrotus purpuratus GN=CYIB PE=3 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 3.328e-106
Identity = 184/213 (86.38%), Postives = 191/213 (89.67%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            MCD++V+ALV+DNGSGM KAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYP+EHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MCDDDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPMEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 33.4982 bits (75), Expect = 3.328e-106
Identity = 27/66 (40.91%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  +FLG+E  G
Sbjct:  217 LCYVALDFEQEMQTAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPAFLGMESAG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTA_STRPU (Actin, cytoskeletal 1A OS=Strongylocentrotus purpuratus GN=CYIA PE=3 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 3.328e-106
Identity = 184/213 (86.38%), Postives = 191/213 (89.67%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            MCD++V+ALV+DNGSGM KAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYP+EHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MCDDDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPMEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 33.4982 bits (75), Expect = 3.328e-106
Identity = 27/66 (40.91%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  +FLG+E  G
Sbjct:  217 LCYVALDFEQEMQTAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPAFLGMESAG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACT2_LUMTE (Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=2 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 4.342e-106
Identity = 186/213 (87.32%), Postives = 192/213 (90.14%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            M +E+V+ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MAEEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 31.187 bits (69), Expect = 4.342e-106
Identity = 26/66 (39.39%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TA++SSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  217 LCYVALDFEQEMNTASASSSLE--------KSYELPDGQVITIGNERFRCPEAMFHASFLGMESVG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTF_STRPU (Actin, cytoskeletal 3B OS=Strongylocentrotus purpuratus GN=CYIIIB PE=2 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 4.342e-106
Identity = 186/213 (87.32%), Postives = 191/213 (89.67%), Query Frame = 1

Query:   64 MCDEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            MCD++V+ALVVDNGSGM KAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV DS DGVSHTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    1 MCDDDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 213

HSP 2 Score: 31.5722 bits (70), Expect = 4.342e-106
Identity = 26/66 (39.39%), Postives = 32/66 (48.48%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    +EM TAASSSSL+        K Y           N+RFRC E     SF+G+E  G
Sbjct:  217 LCYVALDFEEEMQTAASSSSLE--------KSYELPDGQVITIGNERFRCSETLLQPSFIGMESAG 274

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB3_TAKRU (Actin, cytoplasmic 3 OS=Takifugu rubripes GN=actbc PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 4.342e-106
Identity = 184/211 (87.20%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            ++EV++LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 EDEVASLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 4.342e-106
Identity = 27/66 (40.91%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TA+SSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATASSSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESSG 273

[Close]

BLAST of EY659536 vs. ExPASy Swiss-Prot
Match: ACTB_XENLA (Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 5.665e-106
Identity = 183/211 (86.73%), Postives = 191/211 (90.52%), Query Frame = 1

Query:   70 DEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMDKIWHHTFYNELRVAPE*HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYECYALPHXXXXXXXXXXXXTDYLMKILTERGYSLTATAEREHRRDI 702
            +++++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM+KIWHHTFYNELRVAPE HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DS DGV+HTVPIYE YALPH            TDYLMKILTERGYS T TAERE  RDI
Sbjct:    2 EDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 212

HSP 2 Score: 33.4982 bits (75), Expect = 5.665e-106
Identity = 28/66 (42.42%), Postives = 33/66 (50.00%), Query Frame = 3

Query:  711 LWFVAF*L*QEMXTAASSSSLKNPMICLMVKEYN---------*NQRFRCQEP-YPTSFLGLELGG 878
            L +VA    QEM TAASSSSL+        K Y           N+RFRC E  +  SFLG+E  G
Sbjct:  216 LCYVALDFEQEMATAASSSSLE--------KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 273

The following BLAST results are available for this feature:

BLAST of EY659536 vs. ExPASy Swiss-Prot

BLAST of EY659536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 455


Match Name	E-value	Identity	Description
ACTB1_TAKRU	2.551e-106	87.20	Actin, cytoplasmic 1 OS=Takifugu rubripes GN=actba...	[more]
ACTC_BRAFL	2.551e-106	87.68	Actin, cytoplasmic OS=Branchiostoma floridae PE=2 ...	[more]
ACTC_BRABE	2.551e-106	87.68	Actin, cytoplasmic OS=Branchiostoma belcheri PE=2 ...	[more]
ACT3_LIMPO	2.984e-106	84.58	Actin-3 OS=Limulus polyphemus PE=1 SV=1	[more]
ACTB_STRPU	3.328e-106	86.38	Actin, cytoskeletal 1B OS=Strongylocentrotus purpu...	[more]
ACTA_STRPU	3.328e-106	86.38	Actin, cytoskeletal 1A OS=Strongylocentrotus purpu...	[more]
ACT2_LUMTE	4.342e-106	87.32	Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=2 SV=1	[more]
ACTF_STRPU	4.342e-106	87.32	Actin, cytoskeletal 3B OS=Strongylocentrotus purpu...	[more]
ACTB3_TAKRU	4.342e-106	87.20	Actin, cytoplasmic 3 OS=Takifugu rubripes GN=actbc...	[more]
ACTB_XENLA	5.665e-106	86.73	Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-011-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659536 ID=EY659536; Name=EY659536; organism=Citrus sinensis; type=EST; length=950bp
CTCAAGTTTTGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTATCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGC
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGATAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAATAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCACGAGATGGTGTNTCCCACA
CAGTGCCAATCTATGAATGCTATGCCTTACCTCATGCTATNCTACGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGGTACAGTCTCACAGCCACAGCTGAAAGAGAACATCGCCGCGATA
TCATAGATAATTATGGTTTGTAGCTTTTTAACTTTGACAGGAAATGGNCA
CCGCTGCTTCCTCAAGCTCCCTAAAAAATCCTATGATTTGCCTGATGGTC
AAGGAATACAATTGAAACCAAAGGTTCCGTTGCCAAGAGCCCTATCCAAC
CTCATTCTTGGGTTTGGAACTGGGGGGGCCCTGGAACCCTCCCACCCATT
TTGAATATGGAGGTGTATTCGGAAAATTGGATGCCACACATCCCTCTTGA