EY659535 | Citrus Genome Database

Overview


Name	EY659535
Unique Name	EY659535
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	941

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTH_HUMAN (Actin, gamma-enteric smooth muscle OS=Homo sapiens GN=ACTG2 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.120e-95
Identity = 167/200 (83.50%), Postives = 176/200 (88.00%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            MC+E   ALV DNGSGLCKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHH+FY ELRVAPEEHP LLTEAPLNPKA+REKMTQIMFETFN P MYVAIQAVLSLYASG TTGIVLDSG+ V H VPIYE YA+PHAI+ LD AGRDLTDYLMKILTERG S
Sbjct:    1 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYS 200

HSP 2 Score: 32.7278 bits (73), Expect = 3.120e-95
Identity = 25/71 (35.21%), Postives = 35/71 (49.30%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSI 283

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTH_CHICK (Actin, gamma-enteric smooth muscle OS=Gallus gallus GN=ACTG2 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.120e-95
Identity = 167/200 (83.50%), Postives = 176/200 (88.00%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            MC+E   ALV DNGSGLCKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHH+FY ELRVAPEEHP LLTEAPLNPKA+REKMTQIMFETFN P MYVAIQAVLSLYASG TTGIVLDSG+ V H VPIYE YA+PHAI+ LD AGRDLTDYLMKILTERG S
Sbjct:    1 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYS 200

HSP 2 Score: 32.7278 bits (73), Expect = 3.120e-95
Identity = 25/71 (35.21%), Postives = 35/71 (49.30%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSI 283

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTH_BOVIN (Actin, gamma-enteric smooth muscle OS=Bos taurus GN=ACTG2 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.120e-95
Identity = 167/200 (83.50%), Postives = 176/200 (88.00%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            MC+E   ALV DNGSGLCKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHH+FY ELRVAPEEHP LLTEAPLNPKA+REKMTQIMFETFN P MYVAIQAVLSLYASG TTGIVLDSG+ V H VPIYE YA+PHAI+ LD AGRDLTDYLMKILTERG S
Sbjct:    1 MCEEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYS 200

HSP 2 Score: 32.7278 bits (73), Expect = 3.120e-95
Identity = 25/71 (35.21%), Postives = 35/71 (49.30%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSI 283

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT4_DROME (Actin, larval muscle OS=Drosophila melanogaster GN=Act79B PE=2 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 4.071e-95
Identity = 169/200 (84.50%), Postives = 180/200 (90.00%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            MCDE  +ALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKD  VG EAQS  G+L+LKYP+EHG+ T WDDMEK+WHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFN+P MYVAIQAVLSLYASG TTGIVLDSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    1 MCDEEASALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200

HSP 2 Score: 26.9498 bits (58), Expect = 4.071e-95
Identity = 19/45 (42.22%), Postives = 26/45 (57.78%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFR 827
            I +K+   ALDF  EMATAA  +  +K+ +   G    I N+RFR
Sbjct:  213 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFR 257

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTM_PISOC (Actin, muscle OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 5.200e-95
Identity = 172/200 (86.00%), Postives = 181/200 (90.50%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            MCDE VAALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFN+P MYVAIQAVLSLYASG TTGIV D+G+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDTGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 5.311e-95
Identity = 168/200 (84.00%), Postives = 178/200 (89.00%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            M  E V ALV+DNGSG+CKAGFAGDDAP AVFPSIVGRP H GVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDY+MKILTERG S
Sbjct:    1 MDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYS 200

HSP 2 Score: 31.5722 bits (70), Expect = 5.311e-95
Identity = 24/71 (33.80%), Postives = 34/71 (47.89%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EM TAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLAYVALDFEAEMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSI 283

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT10_DICDI (Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 6.928e-95
Identity = 167/197 (84.77%), Postives = 177/197 (89.85%), Query Frame = 1

Query:   73 E*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            E V ALV+DNGSG+CKAGFAGDDAP AVFPSIVGRP H GVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDY+MKILTERG S
Sbjct:    4 EDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYS 200

HSP 2 Score: 31.5722 bits (70), Expect = 6.928e-95
Identity = 24/71 (33.80%), Postives = 34/71 (47.89%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHEPPHTKM 902
            I +K+   ALDF  EM TAA  S  +K+ +   G    I N+RFRC    +     G  + G HE  +  +
Sbjct:  213 IKEKLAYVALDFEAEMQTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSI 283

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACTB_CAMDR (Actin, cytoplasmic 1 OS=Camelus dromedarius GN=ACTB PE=1 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 6.928e-95
Identity = 168/198 (84.85%), Postives = 178/198 (89.90%), Query Frame = 1

Query:   70 DE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            D+ +AALVVDNGSG+CKAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG EAQS   +LTLKYP+E G+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDYLMKILTERG S
Sbjct:    2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRCILTLKYPIERGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199

HSP 2 Score: 31.9574 bits (71), Expect = 6.928e-95
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EMATAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  212 IKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE 276

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 9.039e-95
Identity = 168/200 (84.00%), Postives = 178/200 (89.00%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERGTS 663
            M  E V ALV+DNGSG+CKAGFAGDDAP AVFPSIVGRP H GVMVGMGQKDS VG EAQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFNTP MYVAIQAVLSLYASG TTGIV+DSG+ V HTVPIYE YA+PHAIL LD AGRDLTDY+MKILTERG S
Sbjct:    1 MDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYS 200

HSP 2 Score: 30.8018 bits (68), Expect = 9.039e-95
Identity = 24/65 (36.92%), Postives = 32/65 (49.23%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EM TAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  213 IKEKLAYVALDFEAEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHE 277

[Close]

BLAST of EY659535 vs. ExPASy Swiss-Prot
Match: ACT1_LYTPI (Actin, cytoskeletal 1 OS=Lytechinus pictus PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 1.179e-94
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 1

Query:   64 MCDE*VAALVVDNGSGLCKAGFAGDDAPTAVFPSIVGRPTHQGVMVGMGQKDSLVGYEAQSNIGVLTLKYPMEHGVGTYWDDMEKIWHHTFYIELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFNTPGMYVAIQAVLSLYASGHTTGIVLDSGECVFHTVPIYECYAIPHAILPLD*AGRDLTDYLMKILTERG 657
            MCD+ +AALV+DNGSG+ KAGFAGDDAP AVFPSIVGRP HQGVMVGMGQKDS VG +AQS  G+LTLKYP+EHG+ T WDDMEKIWHHTFY ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETFN+P MYVAIQAVLSLYASG TTGIV DSG+ V +TVPIYE YA+PHAIL LD AGRD+TDYLMKILTERG
Sbjct:    1 MCDDDIAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGGQAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSYTVPIYEGYALPHAILRLDLAGRDITDYLMKILTERG 198

HSP 2 Score: 30.8018 bits (68), Expect = 1.179e-94
Identity = 24/65 (36.92%), Postives = 32/65 (49.23%), Query Frame = 3

Query:  696 ISKKILVGALDFSPEMATAAY*SCPKKT*DCLRGS-NPIRNKRFRC-H*PYSSIIFGYGTRGFHE 884
            I +K+   ALDF  EM TAA  S  +K+ +   G    I N+RFRC    +     G  + G HE
Sbjct:  213 IKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHE 277

The following BLAST results are available for this feature:

BLAST of EY659535 vs. ExPASy Swiss-Prot

BLAST of EY659535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451


Match Name	E-value	Identity	Description
ACTH_HUMAN	3.120e-95	83.50	Actin, gamma-enteric smooth muscle OS=Homo sapiens...	[more]
ACTH_CHICK	3.120e-95	83.50	Actin, gamma-enteric smooth muscle OS=Gallus gallu...	[more]
ACTH_BOVIN	3.120e-95	83.50	Actin, gamma-enteric smooth muscle OS=Bos taurus G...	[more]
ACT4_DROME	4.071e-95	84.50	Actin, larval muscle OS=Drosophila melanogaster GN...	[more]
ACTM_PISOC	5.200e-95	86.00	Actin, muscle OS=Pisaster ochraceus PE=3 SV=1	[more]
ACT1_DICDI	5.311e-95	84.00	Major actin OS=Dictyostelium discoideum GN=act1 PE...	[more]
ACT10_DICDI	6.928e-95	84.77	Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1...	[more]
ACTB_CAMDR	6.928e-95	84.85	Actin, cytoplasmic 1 OS=Camelus dromedarius GN=ACT...	[more]
ACT22_DICDI	9.039e-95	84.00	Putative actin-22 OS=Dictyostelium discoideum GN=a...	[more]
ACT1_LYTPI	1.179e-94	83.33	Actin, cytoskeletal 1 OS=Lytechinus pictus PE=2 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-011-C02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659535 ID=EY659535; Name=EY659535; organism=Citrus sinensis; type=EST; length=941bp
CTCAAGTGTTTTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAATAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTCTGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCACA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAACGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTCTTGTTGGATATGAAGCTCAATCTAATA
TAGGTGTCCTTACCTTGAAATACCCCATGGAACACGGTGTTGGCACATAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACATTGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTGACAGAGAAAAGATGACCCAAATCATGTTTGAGACCTTCAAC
ACACCCGGCATGTATGTAGCTATACAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCATACCACTGGTATCGTTCTTGATTCAGGAGAGTGTGTTTTCCACA
CAGTGCCAATCTATGAATGTTATGCCATACCTCATGCTATCCTCCCTTTG
GACTAGGCTGGTCGGGACTTGACCGACTACCTTATGAAGATCCTTACAGA
AAGAGGTACCAGTTCACACCACATCTGAAATAGAAATCGGACGGGATATC
AAAGAAAATTCTGGTTGGGGCGTTAGACTTTTCACCAGAAATGGCCACCG
CTGCTTACTGAAGCTGCCCTAAAAAAACCTAGGATTGCCTGAGGGGCAGT
AATCCCATTCGAAACAAAAGGTTCCGGTGCCATTAACCCTATTCCTCCAT
AATTTTTGGGTATGGAACCCGGGGGTTCCATGAACCACCTCACACCAAAA
TGAAAGGGAGGGGATTCCGCAAAAATGGATGCCAACCAGCT