EY659500

Overview
NameEY659500
Unique NameEY659500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACTT1_HUMAN (Actin-related protein T1 OS=Homo sapiens GN=ACTRT1 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 3.591e-55
Identity = 105/225 (46.67%), Postives = 151/225 (67.11%), Query Frame = 2
Query:  143 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            A D+  ++ DNG+G+ KAG +G+  PR V  S++G  +    +  + QK  +VG EA  K   L L YPIE G+V+ WDDMEK+W H F  EL V P + PVL+TE  LNP+  REK+ ++MFETF+VP  Y++  AV +LYAS   TG+V+DSGDGV+ TVPI+EGY+LPHA+ +L +AGRD+T+ L ++L    + F     + +V ++KEK  Y+AL  E++
Sbjct:    6 ALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQK-YFVGQEALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKAVVNNIKEKLCYIALEPEKE 229          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACTT2_HUMAN (Actin-related protein T2 OS=Homo sapiens GN=ACTRT2 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 4.690e-55
Identity = 105/225 (46.67%), Postives = 149/225 (66.22%), Query Frame = 2
Query:  143 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            A D   ++ DNG+G  KAG +G+  PR +  SIVG  +         QK  +VG+EA  K+  L L  P E G+++ WDD+E++W H F  EL V P + P+L TE  LNP+ NREKM ++MFE F VPA Y++ QAVL+LYAS   TG+V+DSGD V+ TVPI+EGY+LPHA+ +L +AGRD+T+ LM++L    + F    ++ +V D+K+K  YVAL  E++
Sbjct:    6 ALDSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKKYFVGEEALYKQEALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAVLALYASACVTGLVVDSGDAVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGHTFPCQLDKGLVDDIKKKLCYVALEPEKE 230          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.365e-54
Identity = 108/221 (48.87%), Postives = 144/221 (65.16%), Query Frame = 2
Query:  149 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYE 811
            D   ++ DNG+G+ K G +G+  PR V  S+VG P+         +K  +VG+EAQ     L L YPIE G+V+ WDDMEK+W   F  EL V P E PV +TE  LNP+  REK T+IMFE FNVPA+Y+   AV +L AS   TG+VLDSGDGV+ TVP+YEGY+LPHAI +L +AGRD+T+ L ++L  + Y F     + +V D+KEK   V+L Y+
Sbjct:    8 DNPAVIFDNGSGLCKVGISGEIEPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPQETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLLAKGYTFPCILNKAVVDDIKEKLCTVSLGYK 228          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.509e-53
Identity = 100/221 (45.25%), Postives = 151/221 (68.33%), Query Frame = 2
Query:  158 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            P+V DNG+GM+KAG AG   P+ V+P+I+GR + HT       +++  VGD+AQ +R  L++ YP+E G++S+W DME +W H +   L +   + PVL+TE  LNP A+R+ ++++ FE   VPA Y++ QAVL+L+A+G TTG+VL+SG G++  VPI+EGY L H + +L++AG DLT  LM +L     M   T +R++V D+KE A YVA+ YE +
Sbjct:    7 PVVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTAD----SRQELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQAVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIMLLRTGDRKVVTDIKENACYVAMNYEDE 223          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.779e-53
Identity = 106/217 (48.85%), Postives = 140/217 (64.52%), Query Frame = 2
Query:  149 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVA 799
            D   ++ DNG+G+ K G +G+  PR V  S+VG P+         +K  +VG+EAQ     L L YPIE G+V+ WDDMEK+W   F  EL V P E PV +TE  LNP+  REK T+IMFE FNVPA+Y+   AV +L AS   TG+VLDSGDGV+ TVPIYEGY+LP AI +L +AGRD+T+ L ++L  + Y F     + +V D+KEK   V+
Sbjct:    8 DNPAVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFPCILNKAVVDDIKEKLCTVS 224          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.366e-51
Identity = 99/223 (44.39%), Postives = 144/223 (64.57%), Query Frame = 2
Query:  149 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            D+  ++ DNG+G+ KAG +G+  PR V  S++G  +       + Q   +VG EA  K   L L YPI+ G+V+ WDDMEK+W H F  EL V P + PVL+TE  LNP+  REK+ ++MFE F+VP  Y++  AV +LYAS   TG+V+DSGDGV+  VPI+EGY+LPHA+ +L  AGRD+T+ L ++L    + F     + +  ++KEK  Y+AL  E++
Sbjct:    8 DVPAVIFDNGSGLCKAGVSGEIGPRHVINSVLGHRKFNMPSARLNQY--FVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHLTQLLFANGFNFPCILNKAVANNIKEKLCYIALEPEKE 228          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.110e-47
Identity = 96/219 (43.84%), Postives = 137/219 (62.56%), Query Frame = 2
Query:  146 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVAL 802
            E  + +V D GTG  K GFAG   P     ++VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F  E+++APEEH VL+++ PL+P  NREK  +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP    RLD AG DLT  L+ +L      FT   +  IV D+K+K  +VAL
Sbjct:   67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTMVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQD-QMGIVEDIKKKCCFVAL 284          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.599e-47
Identity = 96/219 (43.84%), Postives = 136/219 (62.10%), Query Frame = 2
Query:  146 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVAL 802
            E  + +V D GTG  K GFAG   P     + VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F  E+++APEEH VL+++ PL+P  NREK  +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP    RLD AG DLT  L+ +L      FT   +  IV D+K+K  +VAL
Sbjct:   67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTTVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQD-QMGIVEDIKKKCCFVAL 284          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACL7A_BOVIN (Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.018e-47
Identity = 97/224 (43.30%), Postives = 138/224 (61.61%), Query Frame = 2
Query:  131 KMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVAL 802
            K    E  + +V D GTG  K GFAG   P     + VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F+ E+++APEEH VL+++ PL+P  NREK  +++FETF  PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP    RLD AG DLT  LM ++      F T  +  IV D+K+K  +VAL
Sbjct:   65 KKPKLELTKAVVVDLGTGYCKCGFAGLPKPTHRISTTVGKPYMETAKTGDNRKETFVGHELINPEVRLKLINPLRHGIIVDWDTVQDIWEYLFHQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFKTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMCLMNTAGKHF-TEGQLGIVEDIKKKCCFVAL 287          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ACL7A_RAT (Actin-like protein 7A OS=Rattus norvegicus GN=Actl7a PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.368e-46
Identity = 96/219 (43.84%), Postives = 136/219 (62.10%), Query Frame = 2
Query:  146 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVAL 802
            E  + +V D GTG  K GFAG   P     + VG+P       G  +K+ +VG E  +    L L  P+ HGI+ +WD ++ IW + F  E+++APEEH VL+++ PL+P  NREK  +++FETFN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP    RLD AG DLT+ LM ++      F+      IV D+K K  +VAL
Sbjct:   72 EVTKAVVVDLGTGFCKCGFAGLPKPTHKISTTVGKPYMETAKTGDNRKETFVGRELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTNYLMNLMNNCGKHFSED-HLSIVEDIKTKCCFVAL 289          
The following BLAST results are available for this feature:
BLAST of EY659500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
ACTT1_HUMAN3.591e-5546.67Actin-related protein T1 OS=Homo sapiens GN=ACTRT1... [more]
ACTT2_HUMAN4.690e-5546.67Actin-related protein T2 OS=Homo sapiens GN=ACTRT2... [more]
ACTT1_MOUSE1.365e-5448.87Actin-related protein T1 OS=Mus musculus GN=Actrt1... [more]
ARPM1_MOUSE1.509e-5345.25Actin-related protein M1 homolog OS=Mus musculus G... [more]
ACTT1_RAT9.779e-5348.85Actin-related protein T1 OS=Rattus norvegicus GN=A... [more]
ACTT1_MACFA5.366e-5144.39Actin-related protein T1 OS=Macaca fascicularis GN... [more]
ACL7A_MACFA2.110e-4743.84Actin-like protein 7A OS=Macaca fascicularis GN=AC... [more]
ACL7A_HUMAN3.599e-4743.84Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE... [more]
ACL7A_BOVIN8.018e-4743.30Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2... [more]
ACL7A_RAT1.368e-4643.84Actin-like protein 7A OS=Rattus norvegicus GN=Actl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659500 ID=EY659500; Name=EY659500; organism=Citrus sinensis; type=EST; length=873bp
ATTCACGGCCTCGACCCACGCGTCCGCTCTCATCTGTACCAAATACAGAG
CGATAGAGAGCCTCGACACTCTCAGCTAGACTCCATCTTCGAATTTTTCT
CTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATGCTGAGGA
TATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCTGGAT
TTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAGTATTGTTGGTAGG
CCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATGCCTATGT
TGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAATACCCAA
TTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAAAGATCTGGCAT
CATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACCCAGTGCT
TCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAGATGACCC
AAATTATGTTTGAAACTTTCAATGTGCCAGCCATGTACGTTGCCATCCAG
GCCGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTGGA
TTCTGGTGATGGTGTGTCTCATACTGTACCAATCTATGAGGGATATGCCC
TTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCTCACTGAT
GCATTGATGAAGATTCTTACTGAGAGAAGTTACATGTTTACCACCACAGC
CGAACGGGAAATTGTTCGTGACATGAAAGAGAAAGCTGCTTATGTTGCCC
TANACTATGAGCAAGACTTGAGACTGCCCAGAGCAGCTCATCTGTTGAGA
AAACTATGAGCTGCCTGATGGCC
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