EY659500

Overview
NameEY659500
Unique NameEY659500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 44/179 (24.58%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR---EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 685
            +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G          G+  NWD +E  W + +  +L+V+PEE P+++T    N K +    E+  ++ F+  NVP   + I+ +    + G+++  V+D G    +  PI +G  + +A++R    G
Sbjct:    8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 57/225 (25.33%), Postives = 103/225 (45.78%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            LV DNG    K G++ D    +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++ R        E  ++  +KE   YV+  + +D
Sbjct:    4 LVLDNGAYNAKIGYSHDSV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRD 219          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.204e-12
Identity = 48/239 (20.08%), Postives = 109/239 (45.61%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-----HTGVMVGMGQK-------DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            LV DNG+   + G++    P   F +++ +PR           G   +       +  VG++  +   +   LK P E  +++NW+  E+I+ + F        +  +HP++LTEA  NP   R++M +++FE + +P++   I A+ S           +  +++  G   +H +P+ +G      + RL++ G  +   L +++  +  +         +  +  +  ++A+ Y+++
Sbjct:    7 LVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGNDITNIEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRLNVGGYHIITYLFRLMQMKYPVHLNAITISRMEKLVHEHCHIAVDYKEE 245          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12
Identity = 56/225 (24.89%), Postives = 104/225 (46.22%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            LV DNG    K G++ ++   +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++ R        E  ++  +KE   YV+  + +D
Sbjct:    4 LVLDNGAYNAKIGYSHENV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRD 219          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.375e-12
Identity = 57/225 (25.33%), Postives = 103/225 (45.78%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            LV DNG    K G++   A  +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++ R        E  ++  +KE   YV+  + +D
Sbjct:    4 LVLDNGAYNAKIGYS--HAHVSVIPNCQFRSKTARLKTFTANQL----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFVDTNIIITEPYFNFSSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKD 219          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11
Identity = 52/242 (21.49%), Postives = 112/242 (46.28%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            LV DNG+   + G+     P   F +++ +PR             G    +  +   +  VG++  +   +   LK P E  I++NW+  E+I+ + F  ++    E+   +P++LTEA  NP   R+ M++++FE + +PA+   I A+ S   Y + R   +  +++  G   +H +P+  G      + RL++ G  +   L+ ++  +  +         +  +  +  ++A+ Y ++
Sbjct:    8 LVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLMQMKYPVHLNAISISRMEKLVHEHCHIAVDYREE 248          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 57/237 (24.05%), Postives = 102/237 (43.04%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEH--GIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG--------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQD 817
            +V DNG   +KAGFAG        P+ + R +    +        ++G+E  +     TL++   H  G + +W     +W     N   + P   ++ +LLT+      +      Q++FE F   A      A L  +  G  T               +V+DSG   +H +P+ +      A+ R+D+ G+ LT+ L ++++ R Y      E  IV ++KE   YV+  +++D
Sbjct:    8 IVLDNGAYHIKAGFAGGKVVE--IPNCLTRSKDGNRL--------FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKY--NMMEETYIVNEIKESVCYVSQNFKED 232          
BLAST of EY659500 vs. ExPASy Swiss-Prot
Match: ARP6_CAEEL (Actin-like protein C08B11.6 OS=Caenorhabditis elegans GN=C08B11.6 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 54/224 (24.11%), Postives = 101/224 (45.09%), Query Frame = 2
Query:  161 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERSYMFTTTAEREIVRDMKEKAAYVALXYEQ 814
            ++ DNG   +K G    ++PR V  SIV + +H        +K  +V  E +      +L Y  PIE G V NWD  ++IW  TF   + V      + LT+      A  +  ++I+F+ F    ++    + L    S +       +V+DSG   +       G  +  +++R+D+ G+ LT+ L   ++ R      + E  ++ + KE   +V+  +++
Sbjct:    6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDE 218          
The following BLAST results are available for this feature:
BLAST of EY659500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 478
Match NameE-valueIdentityDescription
ARP7_YEAST5.800e-1324.58Actin-related protein 7 OS=Saccharomyces cerevisia... [more]
ARP6_MOUSE2.204e-1225.33Actin-related protein 6 OS=Mus musculus GN=Actr6 P... [more]
ARP5_DROME2.204e-1220.08Actin-related protein 5 OS=Drosophila melanogaster... [more]
ARP6_HUMAN4.910e-1224.89Actin-related protein 6 OS=Homo sapiens GN=ACTR6 P... [more]
ARP6_CHICK8.375e-1225.33Actin-related protein 6 OS=Gallus gallus GN=ACTR6 ... [more]
ARP5_DROPS1.866e-1121.49Actin-related protein 5 OS=Drosophila pseudoobscur... [more]
ARP6_SCHPO4.156e-1124.05Actin-like protein arp6 OS=Schizosaccharomyces pom... [more]
ARP6_CAEEL5.429e-1124.11Actin-like protein C08B11.6 OS=Caenorhabditis eleg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659500 ID=EY659500; Name=EY659500; organism=Citrus sinensis; type=EST; length=873bp
ATTCACGGCCTCGACCCACGCGTCCGCTCTCATCTGTACCAAATACAGAG
CGATAGAGAGCCTCGACACTCTCAGCTAGACTCCATCTTCGAATTTTTCT
CTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATGCTGAGGA
TATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCTGGAT
TTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAGTATTGTTGGTAGG
CCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATGCCTATGT
TGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAATACCCAA
TTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAAAGATCTGGCAT
CATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACCCAGTGCT
TCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAGATGACCC
AAATTATGTTTGAAACTTTCAATGTGCCAGCCATGTACGTTGCCATCCAG
GCCGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTGGA
TTCTGGTGATGGTGTGTCTCATACTGTACCAATCTATGAGGGATATGCCC
TTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCTCACTGAT
GCATTGATGAAGATTCTTACTGAGAGAAGTTACATGTTTACCACCACAGC
CGAACGGGAAATTGTTCGTGACATGAAAGAGAAAGCTGCTTATGTTGCCC
TANACTATGAGCAAGACTTGAGACTGCCCAGAGCAGCTCATCTGTTGAGA
AAACTATGAGCTGCCTGATGGCC
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