EY659482

Overview
NameEY659482
Unique NameEY659482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 85/220 (38.64%), Postives = 130/220 (59.09%), Query Frame = 3
Query:   27 EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   + EE+G+H+++G GELHLE+ L  L+ D+  G +I  S+P+V +RE++  KS   V  KSPN+HNR Y+   P+ + +  AI +G I  G   +PK  +K L+ E G D ++A+ I     +    NM +D  KG QYLNE+ D ++ G   A  EG LA E +  + ++
Sbjct:  374 EEQIEPFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLKKDW--GIDIEVSEPIVVYRESI-TKSSPMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRVKNPKEVAKKLA-ELGMDYEIARGI----VDIYNGNMFIDNTKGVQYLNEVMDLLIDGFHQAMDEGPLAREPVMKVIVR 585          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: SN114_SCHPO (114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.907e-32
Identity = 76/224 (33.93%), Postives = 126/224 (56.25%), Query Frame = 3
Query:    9 LVTNDKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKG----GQYLNEIKDSVVAGVQWASKEGALAEENMRGI 668
            +V+++ + D +  R +      V +VAV+    S+LPKL++GL++  KS P+ +  +EESGEH I G GE++++  L DL+  +    EI  SDPV  F ET ++ S     S +PNK NR+ M   PLE+G++  I++G++      K  S+   + + WD   ++ IW FGP+  G N++ D           LN +K+ +  G QW ++EG L +E +R +
Sbjct:  578 IVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLY-SEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNV 800          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.907e-32
Identity = 78/215 (36.28%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   33 DAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILS--EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGI 668
            D  P   M     PVV +A++ K  +DLPKL++ L+ ++K+DP +   + +E+GEH+I+G GELHLE+ +  +++D+    +++ S+P+V +RETV +K       KSPNKHNR Y +  PL E +  AI DG+I      K +  +++  EE G   D A+ + C      G N+++DM KG QYL+E  + ++     A  +G LA E + G+
Sbjct:  376 DMEPFEPMTHYTDPVVTLAIEAKHTADLPKLIDVLRTISKADPSIQVDINQETGEHLISGMGELHLEVTIYRIKNDYK--VDVVTSEPLVVYRETV-DKKGGPFEGKSPNKHNRFYFQVEPLPENVVSAILDGKIPEGSKFKDKKAVMANLEEAGLTHDEARGLVCI----YGTNVMLDMTKGIQYLDETMELLIESFNEAMDKGPLANEKVYGL 583          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.797e-32
Identity = 84/220 (38.18%), Postives = 131/220 (59.55%), Query Frame = 3
Query:   27 EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   + EE+G+H+++G GELHLE+ L  L+ D+  G +I  S+P+V +RE++ + S   V  KSPN+HNR Y+   P+ + +  AI +G I  G   +PK  +K L+ E G D ++A+ I     +    NM +D  KG QYLNE+ D ++ G   A  EG LA+E +  + ++
Sbjct:  374 EEPIEPFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLKKDW--GIDIDVSEPIVVYRESITKPS-PMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRIKNPKEVAKKLA-ELGMDYEIARGI----VDVYNGNMFLDNTKGVQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVR 585          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.461e-31
Identity = 81/213 (38.03%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            P  ++K    PVV +A++ K   DLPKL+E L++LAK DP +  ++ EE+GEH+I+G GELHLE+ ++ ++ D+    ++I S P+V FRETV   S   V  KSPNKHNR Y+   PL E + +   +G +  + D K R ++L E       L  +      E    N+  D+ KG QYLNE  + ++ G + A + G +A E   GI +K
Sbjct:  378 PFESIKHYSEPVVTMAIEAKNPRDLPKLIEVLRKLAKEDPTLHITLNEETGEHLISGMGELHLEVKVEKIRRDYK--LDVITSPPIVVFRETVTGTS-PVVEGKSPNKHNRFYIVVEPLPEKVIQMFKEGVVDMKMDKKERRRLLQE-----AGLTSEEAAGAEEYYEGNLFCDVTKGIQYLNETMELILEGFREAMRAGPIAREPCMGIKVK 582          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 85/214 (39.72%), Postives = 125/214 (58.41%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            P  +++ +  PVV VAV+ K   DLPKLVE L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D   G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +G I  R  + + R K+++   G DKD AK+I     +    N   DM KG Q+LNE  + V+ G     K G L++E   G+ +K
Sbjct:  380 PFESIRHASEPVVTVAVEAKHMKDLPKLVEVLRQVAKEDPTLKITLDEETGEHLMAGMGELHLEVIAHRIERD--KGVEISTTPPIVVYRETI-TGTAGPVEGKSPNRHNRFYVVVEPLEPEVRELIREGEISMRMPELERREKLIAA--GLDKDEAKRI----ADIFESNAYFDMTKGIQHLNETMELVLEGFVEVMKAGPLSKEPCMGVKVK 584          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 85/213 (39.91%), Postives = 120/213 (56.34%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            P  ++K +  PVV VAV+ K   DLPKLVE L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D   G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +  I  R  P+V  +      G +KD AKKI          N   DM KG QYLNE  + ++ G     K G L++E   G+ +K
Sbjct:  380 PFESIKHASEPVVTVAVEAKHMKDLPKLVEVLRQVAKEDPTLKITLDEETGEHLMAGMGELHLEVIAHRIERD--KGVEITTTPPLVVYRETI-TGTAGPVEGKSPNRHNRFYVIVEPLEPEVRELIRNDEISMR-MPEVERREKLMAAGLNKDEAKKI----VNIFESNAYFDMTKGIQYLNETMELIIEGFTEVMKAGPLSKEPCMGVKVK 584          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.641e-30
Identity = 80/212 (37.74%), Postives = 121/212 (57.08%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGI 668
            P   M     PVV +A++ K  +DLP+L+E L+ ++K+DP +   + +E+GEH+I+G GELHL++ L  +++D+    E+  SDP+V +RETV EK       KSPNKHNR Y E  PL+  + +AI+DG I  G +   K     L    G D+D AK + C      G NM+ D+ +G QYL+E  + ++         G LA E + G+
Sbjct:  379 PFEPMIHYSEPVVTLAIEAKHTADLPRLIEVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--VEVETSDPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKALVELLVSKGIDRDEAKGLVC----VEGTNMMFDVTRGIQYLDETMELLIEAFVEVMNRGPLANEKVFGV 583          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.641e-30
Identity = 78/210 (37.14%), Postives = 118/210 (56.19%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGI 668
            P  +++    PVV VAV+ K   DLPKL+E L+++AK DP +  ++ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RET+ +K    +  KSPN+HNR Y+   PL+  +  AI +G I   + P++  +    E G DK+ AK I          N+ +D  KG QYLNE  + V+ G +   + G L  E +  +
Sbjct:  380 PFESIRHVSEPVVTVAVEAKHTKDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRETI-KKKTEPIEGKSPNRHNRFYISVEPLDLEIVSAIKEGEI-TMNMPELERRQKLIELGMDKEQAKGI----AGIFNSNIFIDQTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANV 581          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.061e-30
Identity = 74/200 (37.00%), Postives = 122/200 (61.00%), Query Frame = 3
Query:   72 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGI 668
            PVV ++V+ +   DL K+++ L++L+  D  +V  + EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+LY+   PL     + I +G I    D K  +KIL ++  WD D AKKI          N+ +D   G Q+L EI D+++ G + A KEG LA E +RG+
Sbjct:  396 PVVTISVEPRNPKDLTKMIDALRKLSIEDSNLVVKINEETGEYLLSGMGFLHLEVSLQLLKENY--GLDVVTTPPIVVYRESIRNKS-QVFEGKSPNKHNKLYISVEPLNNQTIDLIANGTIKEDMDNKEMAKILRDQAEWDYDEAKKIVAIDENI---NVFIDATSGVQHLREIMDTLLQGFRLAMKEGPLAFEPVRGV 589          
The following BLAST results are available for this feature:
BLAST of EY659482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
EF2_PYRHO9.991e-3338.64Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
SN114_SCHPO2.907e-3233.93114 kDa U5 small nuclear ribonucleoprotein compone... [more]
EF2_PICTO2.907e-3236.28Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_PYRAB3.797e-3238.18Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_ARCFU2.461e-3138.03Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_METMT4.198e-3139.72Elongation factor 2 OS=Methanococcoides methyluten... [more]
EF2_METBU1.221e-3039.91Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_THEAC4.641e-3037.74Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_METMA4.641e-3037.14Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_SULAC6.061e-3037.00Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659482 ID=EY659482; Name=EY659482; organism=Citrus sinensis; type=EST; length=811bp
CGGACGCGTTGGTGACAAACGATAAGGAAGTTGATGCCCATCCTATCCGT
GCTATGAAGTTCTCCGTCTCACCTGTGGTTCGTGTGGCTGTACAGTGCAA
AGTTGCATCTGATCTCCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCCA
AGTCAGATCCCATGGTTGTCTGTTCCATGGAGGAATCTGGAGAGCATATC
ATTGCCGGTGCAGGAGAACTCCATCTTGAGATCTGTTTGAAGGATTTGCA
GGATGATTTCATGGGTGGTGCTGAGATTATCAAATCTGATCCTGTTGTGT
CCTTCCGTGAAACTGTCCTTGAGAAGTCCTGCCGTACTGTTATGAGCAAG
TCTCCAAACAAACACAATCGTCTCTATATGGAAGCCCGACCATTGGAGGA
AGGTCTTGCCGAGGCAATTGATGATGGTCGTATTGGTCCAAGGGATGATC
CTAAGGTTCGTTCTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGAT
CTTGCCAAGAAAATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACAT
GGTTGTGGATATGTGCAAGGGAGGTCAGTACTTGAATGAAATTAAGGATT
CAGTTGTTGCTGGGGTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAA
GAAAACATGAGGGGCATTGCTTTGAAGTTTGGGATGTGGTCCTTATGCCG
ATGCTATCCACAGAGTGTGGCCAAGTTATCCCACTGCTAAAAGGGTATTT
ATGCTCCAGCTTAAAGCAAACCAAGCTCTTGAGCCTGTCACTTATTGGAA
TCCAGCTCCTG
back to top