EY659482

Overview
NameEY659482
Unique NameEY659482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.264e-27
Identity = 74/226 (32.74%), Postives = 128/226 (56.64%), Query Frame = 3
Query:   12 VTNDKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---VRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            V +  E+      ++  +  PV+ VA++ K   DLPKL+E L+++A+ D  V   + EE+GEH+I+G GELH+E+ + + +    GG E+   +P+V +RET+   S   +  KSPNKHN+LYM A P++E +  A  +G+I   D  K      +    E G +K+ AK++          NM+V+M +G   L+E ++ ++ G +   + G LA E ++G+ ++
Sbjct:  372 VCSPSEILEPGFESLTHTSEPVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLEKEQAKRVM----SIYNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIR 591          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.018e-25
Identity = 75/208 (36.06%), Postives = 121/208 (58.17%), Query Frame = 3
Query:   72 PVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK-----VRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            PV+ VA++ K   DLPKL++ L+++AK D  V   + EE+GEH+I+G GELH+E+ + + +     G E+   +P+V +RE V   S   V  KSPNKHNRLY  A PL+E +  A  +G I   D  K     V +K++  E G +++ AK++          N++++M +G   L+E ++ ++ G + A K G LA E  +G+ +K
Sbjct:  392 PVITVAIEAKNTKDLPKLIDVLRQIAKEDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDAGVEVDVGEPIVVYREAVNGVSPE-VEGKSPNKHNRLYFVAEPLDECVYNAHVEGLIKDEDFKKKTPKEVETKLV--EIGMNREEAKRVMTI----YEGNVLLNMTRGIVQLDEARELIIEGFKEAVKNGPLAAEKCQGVKVK 591          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.667e-25
Identity = 67/213 (31.46%), Postives = 120/213 (56.34%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            P  ++     PV+  +++ +   DLPKL+E L++++K DP +   + E++GEH+I+G GELHLE+  + ++ +   G  +   +P+V +RET    S + V   SPN+HN+ Y+    L + + E I  G +   D P+   + + +E G DK+ ++ +       IG N+ +D  KG Q+LNE  + VV G+  + ++G LA E + G  ++
Sbjct:  380 PFESIDHISEPVITKSIEAQNMDDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIR 584          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.667e-25
Identity = 67/213 (31.46%), Postives = 120/213 (56.34%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            P  ++     PV+  +++ +   DLPKL+E L++++K DP +   + E++GEH+I+G GELHLE+  + ++ +   G  +   +P+V +RET    S + V   SPN+HN+ Y+    L + + E I  G +   D P+   + + +E G DK+ ++ +       IG N+ +D  KG Q+LNE  + VV G+  + ++G LA E + G  ++
Sbjct:  380 PFESIDHISEPVITKSIEAQNMDDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIR 584          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.224e-22
Identity = 81/308 (26.30%), Postives = 129/308 (41.88%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------------------------------------KSCRTVMSKSPNKHNRLYMEARPLEEG-----------------LAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDL--------AKKIWCFGPETIGPNMVVDM----------------CKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALKFGMWSLCRCYPQSVAKLSH 734
            P   + F  +P+VRVAV+ K  S++P+LV+G+K L ++DP V   ++E+GEH++  AGE+HL+ CL DL++ F     I  S+P++ FRET+ +                                     S   +   +PNK   L + A PL E                  L  ++++GR       K + KI   +   +K L          +IW FGP   GPN++V                   K      +  +S+V+G Q A+  G + EE + G+      W L +C  Q  +   H
Sbjct:  606 PFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQVLIQETGEHVLVTAGEVHLQRCLDDLRERF-AKIHISVSEPIIPFRETITKPPKVDMVNEEIGRQQKVAVIHQTKEEQSKIPEGIHVDSDGLITIPTPNKLATLSVRAIPLPEEVTRILEENSDLIRSMELLTSSLNEGRNTQAIHQKTQEKIWEFKGKLEKHLTGRKWRNTVDQIWSFGPRKCGPNILVSRSEDFQNSVWSGPAGRESKEASRFRDFGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWELNKCAEQGASDKQH 912          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.935e-22
Identity = 76/307 (24.76%), Postives = 134/307 (43.65%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------------------------------------KSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKI-----------LSEEFGWD--------------KDLAKKIWCFGPETIGPNMVVD----------------MCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALKFGMWSLCRCYPQSVAKLS 731
            P   + F  +P+VRVAV+ K  S++P+LV+G+K L ++DP V   ++E+GEH++  AGE+HL+ CL DL++ F     I  S+P++ FRET+ +                                     S   +   +PNK   L + A PL E + + +++     R   ++ S +            ++E  W+              +++  +IW FGP   GPN++V+                  K      ++ +S+V+G Q A+  G + EE + G+      W L +   Q  + L+
Sbjct:  606 PFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERF-AKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKSEDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQGASDLA 911          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21
Identity = 64/228 (28.07%), Postives = 117/228 (51.32%), Query Frame = 3
Query:   48 RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTV-MSKSPNKHNR-------LYMEARPLEEGLAEAIDDGRIGP----------RDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            + + +    V ++ +Q  +  +LPKL++ L +++K  P V+  +EESGEH+I G GEL+++  L DL+  +    EI  SDP+  F E+   +S  ++ +S S ++          + + A P++  + + +    +G            D+P+  SKIL  E+GWD   ++ +W F    +  N  +      + L++ K+ ++ G  WA KEG LAEE + G+  K
Sbjct:  593 KPLDYITEAVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESGEHVILGNGELYMDCLLYDLRASY-AKIEIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMIQDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYGWDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYK 819          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.389e-18
Identity = 69/219 (31.51%), Postives = 111/219 (50.68%), Query Frame = 3
Query:   42 PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSM-EESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEE----GLAEAIDDGRIGPRDDPKVRSKILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIALK 677
            P  A+K    PVV  A++ K   DLPKL+E LK + K DP +   + +ESG+ +I+G G+LHLEI    +++DF    +II S+P+V +RE+V +     V  KSPNK N+ Y+    + +     L E +  G +      K+   I+      G+ ++ A++      E    NM  DM +G  ++ E+ D V+         G +A E   G+ +K
Sbjct:  392 PFEAIKHIFDPVVTKAIEPKDPRDLPKLIEVLKLIQKEDPTLKVEIDQESGQILISGLGDLHLEIVEYRIKNDFK--VDIITSNPIVVYRESV-KGQAGPVEGKSPNKLNKFYITVEKMPDELYWKLREKLLKGELPEGKIKKMNEDIIKHLMSLGFTREEAQRCKVIYRE----NMFFDMTRGIIHIGEVIDMVMDAFMQVMDHGPIAWEPCIGLIVK 603          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.450e-17
Identity = 76/262 (29.01%), Postives = 121/262 (46.18%), Query Frame = 3
Query:   21 DKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSP---NKHNRLYMEAR------PLEEGLAEAIDDGRIGPRD---------DPKVRS----------------KILSEEFGWDKDLA---KKIWCFGPETIGPNMVV-------DMCKGGQYLNEIKDSVVAGVQWASKEGALAEENMRGIAL 674
            +K V    +  + F  +P+VRVAV+     ++ KLV GLK L ++DP V   +E +GEHI+  AGELHLE CLKDL + F  G EI  S+P + +RET L  S       S      H  L  + +      PL   + + +   +   ++         DP + S                +++++E    + L+    K+  FGP  +G N+++        + +G     E  DS+  G Q A  EG LA E ++G+ +
Sbjct:  660 EKGVQGVNLAGVNFHFTPIVRVAVEPANPVEMSKLVRGLKLLDQADPCVHTYVENTGEHILCTAGELHLERCLKDLTERF-AGIEITHSEPAIPYRETFLSASDMNPPQNSQLGRGVHELLLSQYKITFRTFPLSGKVTDFLSQHQNSIKNILKTSTSSMDPVIESTGSSFLDKKSLLVAFEEVINQEEKSRELLSGFKVKLAGFGPSRVGCNILLSQDNLLGSLFEGTPAAFEYSDSIKNGFQLAVSEGPLANEPVQGMCV 920          
BLAST of EY659482 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.004e-16
Identity = 75/269 (27.88%), Postives = 119/269 (44.24%), Query Frame = 3
Query:   66 VSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV-------------------------------------------LEKSCRTVMSKSPN--KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEE---FGWDKDLAKKIWCFGPETIGPNMVVDMCKGGQYL-----------NEIKDSVVAGVQWASKEGALAEENMRGIALKFGMWSL 695
            + P+VRVA++     ++ KLV GL  L ++DP V  ++EE+GEH+I  AGE+HLE CLKDL++ F    EI  S P+V +RET                                            L K  +T+ + S N  K NR  + +  L + + E +   +   R      SK+L EE    G  K+    I  FGP+ +GPN++ D  K  +             +++ + VV   Q  + +G L  E ++GI +    + +
Sbjct:  560 MEPIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERF-AKIEIQASQPLVPYRETTIATPDLLAKNKELSIGFVTATLPVGGVTIGITVTPLSGSVVDFLLKHSKTIENVSSNFSKKNRNVVVSESLTKSMEEVLTPEKFYER-----LSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEPVQGICVSIDQFDI 822          
The following BLAST results are available for this feature:
BLAST of EY659482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
EF2_METM61.264e-2732.74Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_META32.018e-2536.06Elongation factor 2 OS=Methanococcus aeolicus (str... [more]
EF2_HALSA7.667e-2531.46Elongation factor 2 OS=Halobacterium salinarium GN... [more]
EF2_HALS37.667e-2531.46Elongation factor 2 OS=Halobacterium salinarum (st... [more]
ETUD1_MOUSE1.224e-2226.30Elongation factor Tu GTP-binding domain-containing... [more]
ETUD1_HUMAN7.935e-2224.76Elongation factor Tu GTP-binding domain-containing... [more]
SN114_YEAST2.309e-2128.07114 kDa U5 small nuclear ribonucleoprotein compone... [more]
EF2_NANEQ2.389e-1831.51Elongation factor 2 OS=Nanoarchaeum equitans GN=fu... [more]
RIA1_YEAST3.450e-1729.01Ribosome assembly protein 1 OS=Saccharomyces cerev... [more]
RIA1_SCHPO1.004e-1627.88Ribosome assembly protein 1 OS=Schizosaccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659482 ID=EY659482; Name=EY659482; organism=Citrus sinensis; type=EST; length=811bp
CGGACGCGTTGGTGACAAACGATAAGGAAGTTGATGCCCATCCTATCCGT
GCTATGAAGTTCTCCGTCTCACCTGTGGTTCGTGTGGCTGTACAGTGCAA
AGTTGCATCTGATCTCCCTAAGCTTGTTGAAGGTCTTAAACGGTTGGCCA
AGTCAGATCCCATGGTTGTCTGTTCCATGGAGGAATCTGGAGAGCATATC
ATTGCCGGTGCAGGAGAACTCCATCTTGAGATCTGTTTGAAGGATTTGCA
GGATGATTTCATGGGTGGTGCTGAGATTATCAAATCTGATCCTGTTGTGT
CCTTCCGTGAAACTGTCCTTGAGAAGTCCTGCCGTACTGTTATGAGCAAG
TCTCCAAACAAACACAATCGTCTCTATATGGAAGCCCGACCATTGGAGGA
AGGTCTTGCCGAGGCAATTGATGATGGTCGTATTGGTCCAAGGGATGATC
CTAAGGTTCGTTCTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGAT
CTTGCCAAGAAAATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACAT
GGTTGTGGATATGTGCAAGGGAGGTCAGTACTTGAATGAAATTAAGGATT
CAGTTGTTGCTGGGGTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAA
GAAAACATGAGGGGCATTGCTTTGAAGTTTGGGATGTGGTCCTTATGCCG
ATGCTATCCACAGAGTGTGGCCAAGTTATCCCACTGCTAAAAGGGTATTT
ATGCTCCAGCTTAAAGCAAACCAAGCTCTTGAGCCTGTCACTTATTGGAA
TCCAGCTCCTG
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