EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_LYSSC (60 kDa chaperonin OS=Lysinibacillus sphaericus (strain C3-41) GN=groL PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 117/230 (50.87%), Postives = 155/230 (67.39%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +    +LGL +++  +  LG A KV + KD+TTI+      D I+ARI Q++ +LAET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++   V  + +  E+ D   G  IV +AL  P   IA+NA              E   G+NA T ++ NM++AGV+DPAKVTR ALQNAASVA + LTT+A+
Sbjct:  291 AILTGGQVITEELGLDLKSADISSLGRAAKVVVTKDNTTIVEGVGGADAIEARIGQIRAQLAETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNVYAAVEKVSES-EEGDVATGVKIVLRALEEPVRQIANNAGLEGSIIVDRLKREEIGIGFNAATGEWVNMMEAGVVDPAKVTRSALQNAASVAALFLTTEAV 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 115/232 (49.57%), Postives = 160/232 (68.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            AT+TG +    DLGL +++ S++ LG A KV + KD+TT++  A +++ I+AR+  ++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG +L+++   +PA++  L +  ADE  G  +V +AL AP   IA NA                  GYNA T +Y +M+  G++DPAKVTR ALQNAASV+ M LTT+A+
Sbjct:  291 ATLTGGQVITEDLGLDLKSASLDMLGRASKVVVTKDTTTVVEGAGNEETIKARVQTIRNQIEETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTSLINV---IPAVRALLSEVTADEATGVKLVLRALEAPVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTEAV 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CHLPN (60 kDa chaperonin OS=Chlamydia pneumoniae GN=groL PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 109/230 (47.39%), Postives = 157/230 (68.26%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +ENT++  LG A+KV + K+ TTI+    +K +IQAR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV     + A    L + DE +G  I+ KAL AP   IA NA            A     GY+A+ D Y +M+ AG++DP KVTR AL++AAS+AG++LTT+A+
Sbjct:  293 AILTGGQLVSEELGMKLENTTLAMLGKAKKVIVTKEDTTIVEGLGNKPDIQARCDNIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALVRCIPTLEAFLPMLANEDEAIGTRIILKALTAPLKQIASNAGKEGAIICQQVLARSANEGYDALRDAYTDMIDAGILDPTKVTRSALESAASIAGLLLTTEAL 522          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACP2 (60 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groL PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 115/230 (50.00%), Postives = 158/230 (68.70%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            + +TG E    DLGL +++T + QLG A KV + K++TTI+  +    +I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V +I+    D D + G +IV ++L  P   IAHNA              E   G+NA T+++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+
Sbjct:  291 SVLTGGELITEDLGLDLKSTEIGQLGRASKVVVTKENTTIVEGSGDSAQIAARVNQIRAQVEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYKKVASIE---ADGDVQTGVNIVLRSLEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATNEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 115/230 (50.00%), Postives = 157/230 (68.26%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG E    DLGL +++ ++ QLG A KV + K++TTI+  A   D+I AR+ Q+K ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+     + DE  G +IV +AL  P   IAHNA              E   G+NA T ++ NM++AG++DP KVTR ALQ+AASV+ M LTT+A+
Sbjct:  291 AILTGGEVITEDLGLDLKSANITQLGRASKVVVTKENTTIVEGAGESDKIAARVNQIKAQIEETTSDFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVSSIGAEGDEATGVNIVLRALEEPVRQIAHNAGLEGSVIVERLKKEEAGFGFNAATGEWVNMVEAGIVDPTKVTRSALQHAASVSAMFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 115/230 (50.00%), Postives = 159/230 (69.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            + +TG E    DLGL +++T + QLG A KV + K++TTI+  A   ++I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++    + D + G +IV +AL  P   IAHNA              +   G+NA T ++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+
Sbjct:  291 SVLTGGEVITEDLGLDLKSTEIGQLGRASKVVVTKENTTIVEGAGDTEKIAARVNQIRAQVEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_SYNAS (60 kDa chaperonin 2 OS=Syntrophus aciditrophicus (strain SB) GN=groL2 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 115/230 (50.00%), Postives = 156/230 (67.83%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + D+G  +ENT +E LG A+++ I KD+TTII  A  +  ++ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATETE++++K R+EDA NAT AA+EEGIVPGGG A +     + A+K    + DE++G +IV+KAL  P  +IA NA                  G+NA T+ YE+M++AGVIDP KVTR ALQNAASVA ++LTTQ +
Sbjct:  293 AILTGGTVISEDMGYKLENTRLEDLGRAKRIQIDKDNTTIIDGAGERAALEGRVKQIRAQIDETTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVAYIRTLPILEALK---LEGDEQVGVNIVRKALEEPLKMIAANAGMEGTIVVEKVKEQSGAFGFNARTEVYEDMIEAGVIDPTKVTRFALQNAASVASLMLTTQCM 519          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_PROMT (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL2A) GN=groL2 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 117/230 (50.87%), Postives = 156/230 (67.83%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + D  + +E   +  LG AR+VTI KDSTTI+A+ A   E+  RIA +K+EL ETDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AAIEEGIV GGG  L+ LS+ +  +  KLE  D++ G +I+++AL AP   IA NA                  G+NA T +YE++L+AG++D +KV R ALQ+A S+A +++TT+ +
Sbjct:  291 AVLTGGTLISEDKAMSLEKVQISDLGQARRVTITKDSTTIVANEAQNTELSNRIASIKRELEETDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGIVAGGGTTLLELSEGLGDLAKKLE-GDQKTGVEIIKRALTAPTKQIAINA--GFNGDVVVSDIKRLGKGFNAQTGEYEDLLEAGILDASKVIRLALQDAVSIASLLITTEVV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_ARTAT (60 kDa chaperonin 2 OS=Arthrobacter aurescens (strain TC1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 117/233 (50.21%), Postives = 160/233 (68.67%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVH---LSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            AT+TGA+  + DLGL ++   +E LGTAR++T+ KD+TTI+  A +  ++  R+AQL+ EL  TDS +D EKL ER+AKL+GG+ VIKVGAATE EL+++K RIEDA ++T AA+EEGIV GGG+AL+H     D  PA+K    DA   +G  IV++ALV P   IA NA              E   G+NA + +YE+++ AGVIDP KVTR AL+NAAS+A +VLTT+ +
Sbjct:  290 ATLTGAQVVSPDLGLTLDTVGLEVLGTARRITVTKDNTTIVDGAGTAQDVADRVAQLRAELTRTDSDWDKEKLQERLAKLAGGIGVIKVGAATEVELKEKKHRIEDAVSSTRAALEEGIVSGGGSALIHALKALDESPAVKALEGDAAAAVG--IVRRALVQPLRWIAQNAGFDGFVVVAKVSELEANHGFNAKSGEYEDLIAAGVIDPVKVTRSALRNAASIAALVLTTETL 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_COPPD (60 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groL PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 117/231 (50.65%), Postives = 160/231 (69.26%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A VTG +  + +LG+  E+ + +  G AR V + K+STTI+    S +EI+ RIAQ++K+L  T+S Y+ EKL ER+AKL+GGVAVIKVGAATETE++++K R+EDA +AT AA+EEGIV GGG  LV  S     + DKL  + DE +GA IV+KAL+ PA +IA NA              E+  G++A+  +Y +M +AG+IDP KVTR ALQNAAS+A MVLTT+A+
Sbjct:  292 AIVTGGQVISEELGVSFESVTPDMFGHARSVKVDKESTTIVGGKGSSEEIEKRIAQIRKQLETTESEYEKEKLQERLAKLAGGVAVIKVGAATETEMKEKKHRVEDAVSATKAAMEEGIVAGGGVTLVKAS----TVLDKLPLENDELIGATIVKKALMEPARVIAENAGFAGEVVVEELKKREYPVGFDAVKGEYVDMFEAGIIDPTKVTRSALQNAASIAAMVLTTEAL 518          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LYSSC8.505e-5550.8760 kDa chaperonin OS=Lysinibacillus sphaericus (st... [more]
CH60_EXISA8.505e-5549.5760 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH60_CHLPN8.505e-5547.3960 kDa chaperonin OS=Chlamydia pneumoniae GN=groL ... [more]
CH60_BACP28.505e-5550.0060 kDa chaperonin OS=Bacillus pumilus (strain SAFR... [more]
CH60_BACHD8.505e-5550.0060 kDa chaperonin OS=Bacillus halodurans GN=groL P... [more]
CH60_BACA28.505e-5550.0060 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]
CH602_SYNAS8.505e-5550.0060 kDa chaperonin 2 OS=Syntrophus aciditrophicus (... [more]
CH602_PROMT8.505e-5550.8760 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_ARTAT8.505e-5550.2160 kDa chaperonin 2 OS=Arthrobacter aurescens (str... [more]
CH60_COPPD1.111e-5450.6560 kDa chaperonin OS=Coprothermobacter proteolytic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
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