EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUSI (60 kDa chaperonin OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUME (60 kDa chaperonin OS=Brucella melitensis GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUMB (60 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUC2 (60 kDa chaperonin OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUAB (60 kDa chaperonin OS=Brucella abortus GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUA2 (60 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BRUA1 (60 kDa chaperonin OS=Brucella abortus (strain S19) GN=groL PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 108/231 (46.75%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + DLG+ +E+ +++ LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA              +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  293 AILTGGQVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 109/230 (47.39%), Postives = 148/230 (64.35%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + + GL +E  ++E LGTA KVT+ KD TTI+  A  K+ I+ R  Q+K ++  T S YD EKL ER+AKLSGGVAV+ VGAA+E E++++K R++DA  AT AAIEEGI+PGGG A +   D +  +K   ++ADE  G  I+++A+  P   I  NA              +   GYNA TD YEN+  AGV+DPAKV R AL+NAAS+AGM LTT+ +
Sbjct:  293 AILTGGVVISEEKGLKLEQATIEMLGTADKVTVSKDYTTIVNGAGVKENIKERCDQIKAQIVATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIIPGGGVAYIRAIDSLEGMKG--DNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVREGKGDFGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECV 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 107/231 (46.32%), Postives = 162/231 (70.13%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG    + DLG+ +E+ +++ LG A+KV+I K++TTII  A SK +I+ R AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     +  +  K  + D+R+G D+V++A+ AP   IA NA              +E++ G+NA T++Y ++   GVIDPAKV R ALQ+AASVAG+++TT+A+
Sbjct:  293 AILTGGTVVSEDLGIKLESVTLDMLGRAKKVSIEKENTTIIDGAGSKADIEGRTAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDGL--KTANNDQRVGVDLVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFSYGWNAQTNEYGDLYAMGVIDPAKVVRTALQDAASVAGLLVTTEAM 521          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH601_THEFY (60 kDa chaperonin 1 OS=Thermobifida fusca (strain YX) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.732e-51
Identity = 113/231 (48.92%), Postives = 150/231 (64.94%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +    ++GL +ENT ++ LG ARKV + KD TTI+  A     I  R+ +++ E+  TDS YD EKL ER+A+L+GGVAVIK GAATE EL++RK RIEDA     AA+EEGI+PGGG AL+  S    A  +KLE + DE +GA IV++A+  P   IA NA            + E   G NA T +Y ++ + GVIDP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  292 AILTGGQVITEEVGLKLENTELDMLGRARKVVVTKDETTIVDGAGDASAIAGRVNEIRAEIERTDSDYDREKLQERLARLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALLQAS---IAAFEKLELEGDEAIGASIVRRAVEEPLKQIAINAGYEGGVVVEKVKSLEPGIGLNAATGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAV 519          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BRUSI9.732e-5146.7560 kDa chaperonin OS=Brucella suis (strain ATCC 23... [more]
CH60_BRUME9.732e-5146.7560 kDa chaperonin OS=Brucella melitensis GN=groL P... [more]
CH60_BRUMB9.732e-5146.7560 kDa chaperonin OS=Brucella melitensis biotype 2... [more]
CH60_BRUC29.732e-5146.7560 kDa chaperonin OS=Brucella canis (strain ATCC 2... [more]
CH60_BRUAB9.732e-5146.7560 kDa chaperonin OS=Brucella abortus GN=groL PE=3... [more]
CH60_BRUA29.732e-5146.7560 kDa chaperonin OS=Brucella abortus (strain 2308... [more]
CH60_BRUA19.732e-5146.7560 kDa chaperonin OS=Brucella abortus (strain S19)... [more]
CH60_BACTN9.732e-5147.3960 kDa chaperonin OS=Bacteroides thetaiotaomicron ... [more]
CH605_RHIME9.732e-5146.3260 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5... [more]
CH601_THEFY9.732e-5148.9260 kDa chaperonin 1 OS=Thermobifida fusca (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
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