EY659477

Overview
NameEY659477
Unique NameEY659477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 109/229 (47.60%), Postives = 151/229 (65.94%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 745
            A +TG    A +LG  ++  +++ LG A  V + KD+T ++    + + I+ RI+Q+K ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA  AT AA+EEGIVPGGG A +++   V  +   ++D +  LG  I+ K+L  P   IA NA             SE  TGY+A+  KY NM+++G++DP KVTR ALQNAASV+   LTT+A
Sbjct:  291 AILTGGTVIAEELGRDLKEVTLDMLGQAESVKVSKDNTVVVNGKGNPENIKDRISQIKAQIEETSSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYINVIKEVEKLTSDVQDTE--LGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGTGYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEA 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 109/229 (47.60%), Postives = 152/229 (66.38%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 745
            A +TG    A +LG  ++  +++ LG A  V + KD+T ++    + + I+ RI+Q+K ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA  AT AA+EEGIVPGGG A +++ + V  +   ++D +  LG  I+ K+L  P   IA NA             SE  TGY+A+  KY NM+++G++DP KVTR ALQNAASV+   LTT+A
Sbjct:  291 AILTGGTVIAEELGRDLKEVTLDMLGQAESVKVSKDNTVVVNGKGNPENIKDRISQIKAQIEETSSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYINVINAVEKLTSDVQDTE--LGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGTGYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEA 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_CAMJD (60 kDa chaperonin OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 116/231 (50.22%), Postives = 154/231 (66.67%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 745
            A +TG E  + +LG  +E+ +++ LG A  V I KD+TT++  A  K  I AR+ Q+K ++AET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAAL+         K KL+   DE +GA IV++AL AP   IA NA             A +  TG++A   +Y NML++G+IDP KV R AL NA SVA M+LTT+A
Sbjct:  292 AILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTVVNGAGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAK-----AKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEA 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH60_BARBK (60 kDa chaperonin OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 105/231 (45.45%), Postives = 157/231 (67.97%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +T  +  + D+G+ +EN ++E LG A+KV + K++TTI+  A  K EI AR++Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA NAT AA+EEGIVPGGG AL+  +    A+  K ++ D+  G  I+++AL APA  IAHNA             +   T GYN  T ++ +++  G++DP KV R ALQNAAS+A +++TT+A+
Sbjct:  293 AVLTSGQVISEDVGIKLENVTLEMLGRAKKVHVSKETTTIVDGAGQKSEINARVSQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRAA---KALSIKGKNPDQEAGIGIIRRALQAPARQIAHNAGEEAAVIVGKVLENCSDTFGYNTATAQFGDLISFGIVDPVKVVRSALQNAASIASLLITTEAM 520          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_STRCO (60 kDa chaperonin 2 OS=Streptomyces coelicolor GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 115/231 (49.78%), Postives = 150/231 (64.94%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG E  + ++GL +EN +++ LG+ARKV I KD TTI+  A S D++Q R+ Q++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  S     + +KLE   DE  GA+ V+ AL AP   IA N                   G NA T +Y +M+  G+IDPAKVTR ALQNAAS+A + LTT+A+
Sbjct:  291 AILTGGEVISEEVGLKLENATLDLLGSARKVVITKDETTIVDGAGSADQVQGRVNQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQASQ----VFEKLELTGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLTVGHGLNAATGEYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_STRAW (60 kDa chaperonin 2 OS=Streptomyces avermitilis GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 115/231 (49.78%), Postives = 149/231 (64.50%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG E  + ++GL +EN S++ LG ARKV I KD TTI+  A S D++  R+ Q++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  S    ++ +KLE   DE  GA+ V+ AL AP   IA N                   G NA T +Y +M+  G+IDPAKVTR ALQNAAS+A + LTT+A+
Sbjct:  291 AILTGGEVISEEVGLKLENASIDLLGRARKVVITKDETTIVDGAGSADQVAGRVNQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQAS----SVFEKLELTGDEATGANAVRLALEAPLKQIAVNGGLEGGVIVEKVRNLPVGHGLNAATGEYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_RHOPS (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 109/231 (47.19%), Postives = 160/231 (69.26%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + +LG+ +E+ +++ LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +  ++AD + G +IV KAL AP   IA NA             ++  T G++A T++Y +ML  G++DPAKV R ALQ+AASVA +++TT+A+
Sbjct:  293 AILTGGQLISEELGVKLESVTLKMLGRAKKVVIDKENTTIVNGAGKKADIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVAALLVTTEAM 521          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_MYCTU (60 kDa chaperonin 2 OS=Mycobacterium tuberculosis GN=groL2 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 112/230 (48.70%), Postives = 146/230 (63.48%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + ++GL +EN  +  LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+                  G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  291 AILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_MYCBO (60 kDa chaperonin 2 OS=Mycobacterium bovis GN=groL2 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 112/230 (48.70%), Postives = 146/230 (63.48%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TG +  + ++GL +EN  +  LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+                  G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  291 AILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of EY659477 vs. ExPASy Swiss-Prot
Match: CH602_ACIC1 (60 kDa chaperonin 2 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.271e-50
Identity = 112/231 (48.48%), Postives = 154/231 (66.67%), Query Frame = 2
Query:   59 ATVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 748
            A +TGA+  + ++GL ++   +E LGTAR+V + +D TTI+    S + IQ RI Q++ ++ +TDS +D EKL ER+AKL+GGVAVI+VGAATE EL+++K R+EDA +AT AAIEEGIV GGG+AL+H S  +    D LE   DE +GA IV+KA   P   IA NA                  G++A T +Y +++  G+IDP KVTR AL NAASV G++LTT+AI
Sbjct:  291 AVLTGAQVVSPEVGLKLDEVGLEVLGTARRVRVTRDDTTIVEGGGSAEAIQDRIRQIRAQIDQTDSDWDREKLQERLAKLAGGVAVIRVGAATEVELKEKKHRLEDAVSATRAAIEEGIVAGGGSALLHASSAL----DSLELTGDEAVGASIVRKAAAEPLRWIAENAGFEGYVVCSRVRDLPVGHGFDAQTGEYTDLVARGIIDPVKVTRSALTNAASVVGLLLTTEAI 517          
The following BLAST results are available for this feature:
BLAST of EY659477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CLOBB1.271e-5047.6060 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBA1.271e-5047.6060 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CAMJD1.271e-5050.2260 kDa chaperonin OS=Campylobacter jejuni subsp. d... [more]
CH60_BARBK1.271e-5045.4560 kDa chaperonin OS=Bartonella bacilliformis (str... [more]
CH602_STRCO1.271e-5049.7860 kDa chaperonin 2 OS=Streptomyces coelicolor GN=... [more]
CH602_STRAW1.271e-5049.7860 kDa chaperonin 2 OS=Streptomyces avermitilis GN... [more]
CH602_RHOPS1.271e-5047.1960 kDa chaperonin 2 OS=Rhodopseudomonas palustris ... [more]
CH602_MYCTU1.271e-5048.7060 kDa chaperonin 2 OS=Mycobacterium tuberculosis ... [more]
CH602_MYCBO1.271e-5048.7060 kDa chaperonin 2 OS=Mycobacterium bovis GN=groL... [more]
CH602_ACIC11.271e-5048.4860 kDa chaperonin 2 OS=Acidothermus cellulolyticus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659477 ID=EY659477; Name=EY659477; organism=Citrus sinensis; type=EST; length=904bp
CGGNAATTACGCCTCGACCCACGCGTCCGCGAAAGATTATAGCTCTCCTT
CAAGATTTGCCACTGTGACTGGAGCTGAGTTTCAAGCTGGAGACCTGGGC
TTGCTTATTGAAAACACTTCAGTTGAGCAGCTAGGTACAGCTAGAAAGGT
GACCATCAGAAAGGACTCCACTACCATTATTGCTGATGCTGCATCAAAGG
ATGAAATACAAGCTAGAATTGCACAGCTGAAAAAGGAGTTGGCTGAGACG
GATTCTGTTTATGACTCAGAGAAACTTGCTGAGAGAATTGCTAAATTGTC
TGGCGGGGTTGCTGTTATTAAAGTTGGAGCTGCCACAGAAACTGAGCTTG
AGGACCGTAAACTCCGTATTGAAGATGCCAAGAATGCAACCTTTGCAGCC
ATAGAGGAAGGTATTGTTCCTGGTGGTGGTGCTGCTCTGGTTCATCTGTC
TGATCATGTTCCTGCTATCAAGGACAAGCTTGAAGATGCAGATGAGCGAT
TAGGTGCTGACATTGTGCAGAAGGCACTGGTAGCACCTGCATCACTGATA
GCTCACAATGCTGGAGTTGAAGGTGAGGTTGTTGTGGAGAAGGTGAAAGC
TAGTGAATGGACGACTGGTTACAATGCAATGACAGACAAGTATGAGAACA
TGCTTCAGGCTGGAGTTATTGATCCTGCAAAGGTGACAAGATGTGCATTG
CAGAATGCGGCTTCAGTTGCAGGAATGGTCCTGACCACTCAGGCTATTGT
CGTGGAGAAGCCAAAGCCCAAAACTNCGGTAGCCGCTCCGCCACAAGGTC
TTATGGTGTAATCTCTAGGACTCTCCANATTTAGTTAGGGAGTTTATAGA
TGAAAGATGGGTTTATTGCCGTGACTGAAAAGAAAGTTTACTTAATTGAT
ATAA
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